Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0735.Seq
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.8  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 290 SIFMRFKLNAYLSYFEYLYLI*T*FKSNMSG 382
           S   RF    + SYF YL  I T +   +SG
Sbjct: 74  SFMSRFLCLPFYSYFFYLSYIYTTYSRKLSG 104


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 290 SIFMRFKLNAYLSYFEYLYLI*T*FKSNMSG 382
           S   RF    + SYF YL  I T +   +SG
Sbjct: 30  SFMSRFLCLPFYSYFFYLSYIYTTYSRKLSG 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,166
Number of Sequences: 336
Number of extensions: 2540
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)