Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0735.Seq
         (646 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   4.7  
AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative odorant-b...    23   6.3  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.3  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 313 KCLFELFRIPVPDLDLIQK 369
           KCL     +PVPDL  +QK
Sbjct: 320 KCLIGECWVPVPDLPKVQK 338


>AJ697727-1|CAG26920.1|  285|Anopheles gambiae putative
           odorant-binding protein OBPjj17 protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 443 CEIRCYVFKMSVDFLDR 493
           CE RC +FK+++   DR
Sbjct: 90  CEARCGLFKINMTMTDR 106


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 481 FFRSLNHVCGF 513
           FFR   HVCGF
Sbjct: 931 FFREFLHVCGF 941


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,802
Number of Sequences: 2352
Number of extensions: 9455
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)