Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0735.Seq
         (646 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g31490.1 68414.m03855 transferase family protein contains sim...    29   2.0  
At4g11850.1 68417.m01886 phospholipase D gamma 1 / PLD gamma 1 (...    27   8.1  
At4g11840.1 68417.m01885 phospholipase D gamma 3 / PLD gamma 3 (...    27   8.1  
At4g11830.2 68417.m01884 phospholipase D gamma 2 / PLD gamma 2 (...    27   8.1  
At4g11830.1 68417.m01883 phospholipase D gamma 2 / PLD gamma 2 (...    27   8.1  

>At1g31490.1 68414.m03855 transferase family protein contains
           similarity to anthranilate N-hydroxycinnamoyl
           benzoyltransferase GI:3288180, GI:2239091 from (Dianthus
           caryophyllus); contains Pfam profile PF02458 transferase
           family
          Length = 444

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = -1

Query: 517 KKNHKHDLTI*KINTHFKNVTSDFTFHNILD*IRSHRTNIFTTRL 383
           KKNH  D+    ++     VT+D  F +++D I SHR  +   R+
Sbjct: 311 KKNHVSDIAN-IVHKSITEVTNDTHFTDLIDWIESHRPGLMLARV 354


>At4g11850.1 68417.m01886 phospholipase D gamma 1 / PLD gamma 1
           (PLDGAMMA1) identical to phospholipase D gamma 1
           SP:Q9T053 from [Arabidopsis thaliana]
          Length = 858

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 617 KNQHLLISHFHWDSTYALCQNQLIKKTIGFSHTKK 513
           +NQ+ L S F+WDS   L  N LI   I      K
Sbjct: 563 ENQYFLGSSFNWDSNKDLGANNLIPMEIALKIANK 597


>At4g11840.1 68417.m01885 phospholipase D gamma 3 / PLD gamma 3
           (PLDGAMMA3) identical to phospholipase D gamma 3
           sp:Q9T052 from [Arabidopsis thaliana]
          Length = 866

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 617 KNQHLLISHFHWDSTYALCQNQLIKKTIGFSHTKK 513
           +NQ+ L S F+WDS   L  N LI   I      K
Sbjct: 570 ENQYFLGSSFNWDSNKNLGANNLIPMEIALKIANK 604


>At4g11830.2 68417.m01884 phospholipase D gamma 2 / PLD gamma 2
           (PLDGAMMA2) identical to SP|Q9T051 Phospholipase D gamma
           2 (EC 3.1.4.4) (AtPLDgamma2) (PLD gamma 2) [Arabidopsis
           thaliana]
          Length = 856

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 617 KNQHLLISHFHWDSTYALCQNQLIKKTIGFSHTKK 513
           +NQ+ L S F+WDS   L  N LI   I      K
Sbjct: 560 ENQYFLGSSFNWDSNKDLGANNLIPMEIALKIANK 594


>At4g11830.1 68417.m01883 phospholipase D gamma 2 / PLD gamma 2
           (PLDGAMMA2) identical to SP|Q9T051 Phospholipase D gamma
           2 (EC 3.1.4.4) (AtPLDgamma2) (PLD gamma 2) [Arabidopsis
           thaliana]
          Length = 824

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -3

Query: 617 KNQHLLISHFHWDSTYALCQNQLIKKTIGFSHTKK 513
           +NQ+ L S F+WDS   L  N LI   I      K
Sbjct: 528 ENQYFLGSSFNWDSNKDLGANNLIPMEIALKIANK 562


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,181,313
Number of Sequences: 28952
Number of extensions: 201928
Number of successful extensions: 296
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 296
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)