Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0729.Seq
(370 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 125 2e-28
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 112 2e-24
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 103 1e-21
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 88 4e-17
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 87 7e-17
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 83 1e-15
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 81 5e-15
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 79 2e-14
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 75 3e-13
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 70 1e-11
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 69 3e-11
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 63 1e-09
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 63 2e-09
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 62 3e-09
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 59 3e-08
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 58 5e-08
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 58 5e-08
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 58 5e-08
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 57 9e-08
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 57 1e-07
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 56 3e-07
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 55 5e-07
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 54 8e-07
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 54 1e-06
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 53 1e-06
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 50 1e-05
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 48 4e-05
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 47 1e-04
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 40 0.014
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 37 0.13
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 32 2.9
UniRef50_Q9BZF9 Cluster: Uveal autoantigen with coiled-coil doma... 31 5.1
UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium 19... 31 6.7
UniRef50_A6SKL1 Cluster: Putative uncharacterized protein; n=1; ... 31 6.7
UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1; ... 31 8.9
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 125 bits (302), Expect = 2e-28
Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
Frame = +3
Query: 3 KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
KGHKT+KI K DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13 KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71
Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72 KVSKDKRALKFLKRRLGTHIRAKRKREELS 101
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 112 bits (270), Expect = 2e-24
Identities = 54/78 (69%), Positives = 62/78 (79%)
Frame = +3
Query: 63 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIR 242
R P RLKG+QTKH+KFVRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIR
Sbjct: 3 RFEPERLKGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIR 62
Query: 243 AKRKVKNLATCSLR*GRQ 296
AKRK + L+ + G+Q
Sbjct: 63 AKRKREELSNILTQMGKQ 80
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 103 bits (247), Expect = 1e-21
Identities = 50/82 (60%), Positives = 65/82 (79%)
Frame = +3
Query: 24 ISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRA 203
++ G K +T + R +R +G TKH+KFVRD++REV G A YE+RAMELLKVSKDKRA
Sbjct: 11 LNKGHK-VTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRA 69
Query: 204 LKFLKRRLGTHIRAKRKVKNLA 269
LKF+K+R+GTHIRAKRK + L+
Sbjct: 70 LKFIKKRVGTHIRAKRKREELS 91
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 88.2 bits (209), Expect = 4e-17
Identities = 44/75 (58%), Positives = 53/75 (70%)
Frame = +3
Query: 45 ITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 224
+T + + RP+ KG TK FVR L+REVVG A YEKR ELLKV KDKRALK KR+
Sbjct: 20 VTKRELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRITELLKVGKDKRALKVAKRK 79
Query: 225 LGTHIRAKRKVKNLA 269
LGTH RAK+K + +A
Sbjct: 80 LGTHKRAKKKREEMA 94
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 87.4 bits (207), Expect = 7e-17
Identities = 41/73 (56%), Positives = 55/73 (75%)
Frame = +3
Query: 48 TDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRL 227
T ++ R R KG+ +K +K VR+LVRE+ G A YE+R +E+L++SKDKRALKFLKRR+
Sbjct: 20 TQLPVKQRQNRHKGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRI 79
Query: 228 GTHIRAKRKVKNL 266
GTH RAK K + L
Sbjct: 80 GTHRRAKGKREEL 92
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 83.4 bits (197), Expect = 1e-15
Identities = 41/76 (53%), Positives = 53/76 (69%)
Frame = +3
Query: 45 ITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 224
+T + + RP KG +K + F+R L+REV G A YEKR ELLKV KDKRALK KR+
Sbjct: 20 VTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRITELLKVGKDKRALKVAKRK 79
Query: 225 LGTHIRAKRKVKNLAT 272
LGTH RAKRK + +++
Sbjct: 80 LGTHKRAKRKREEMSS 95
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 81.4 bits (192), Expect = 5e-15
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = +3
Query: 69 RPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAK 248
RP+ KGL+T+ FVR ++REV G + YEKR MELL+ SKDK+A K K+RLGT +R+K
Sbjct: 120 RPSNKKGLKTEKKTFVRSVIREVAGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSK 179
Query: 249 RKVKNLA 269
RK++ L+
Sbjct: 180 RKIEELS 186
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 79.4 bits (187), Expect = 2e-14
Identities = 39/78 (50%), Positives = 54/78 (69%)
Frame = +3
Query: 39 KGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 218
K +T + + RP+R KG +K + FVR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 219 RRLGTHIRAKRKVKNLAT 272
+RLGT RAK K++ L +
Sbjct: 73 KRLGTLKRAKGKIEELTS 90
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 75.4 bits (177), Expect = 3e-13
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = +3
Query: 93 QTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
Q+ + VR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRK + +A
Sbjct: 28 QSPRLQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMA 86
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 70.1 bits (164), Expect = 1e-11
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +3
Query: 45 ITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRR 224
+T K + RP+ KG +K + FVR+L+REV G YEKR ELLKV KDKRALK + +
Sbjct: 20 VTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRITELLKVGKDKRALKVRQEK 79
Query: 225 LGTHIRAKRKVKNLATCS 278
+G +K + + CS
Sbjct: 80 VGHSQESKEEERGDVQCS 97
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 68.9 bits (161), Expect = 3e-11
Identities = 41/87 (47%), Positives = 53/87 (60%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 KGHKTTKISAGRKGITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 182
KGH TT I + +RP+R KGL+TK + V +++REV G A YE+ +EL+K
Sbjct: 22 KGHITTPIPLVKS--------VRPSRKKGLKTKRNALVSEVIREVCGFAPYERHMIELIK 73
Query: 183 ---VSKDKRALKFLKRRLGTHIRAKRK 254
S KRALKF K+RLGT RAK K
Sbjct: 74 TGSASAQKRALKFAKKRLGTLRRAKTK 100
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 63.3 bits (147), Expect = 1e-09
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = +3
Query: 90 LQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
L TKH+KFV+D++REV Y+ + L KVS DK A KF+K+R+G HI KRK + L+
Sbjct: 32 LLTKHTKFVQDMIREVCDFMSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELS 91
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 62.9 bits (146), Expect = 2e-09
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +3
Query: 84 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKN 263
KG + +KFVR LVRE+ G + YE+R ++L++ S +KRA K K+RLG+ RAK KV+
Sbjct: 30 KGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEE 89
Query: 264 L 266
+
Sbjct: 90 M 90
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 62.1 bits (144), Expect = 3e-09
Identities = 36/83 (43%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +3
Query: 24 ISAGRKGITDKAIRIRPARLKGLQTKHS-KFVRDLVREVVGHAQYEKRAMELLKVSKDKR 200
++ G+KG T + R + G KH+ +F +D+++EV A E+ A E KVSKDK+
Sbjct: 16 LNKGQKG-TKVMTQPRHSCGLGHLIKHTTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQ 74
Query: 201 ALKFLKRRLGTHIRAKRKVKNLA 269
ALKF+++ LGTHI AKRK + L+
Sbjct: 75 ALKFIQKMLGTHICAKRKARELS 97
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 58.8 bits (136), Expect = 3e-08
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Frame = +3
Query: 66 IRPARLKGLQT--KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 239
+ P R GL + K F R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH
Sbjct: 11 LAPKRECGLHSSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHR 70
Query: 240 RAKRKVKNL 266
RA +K+ L
Sbjct: 71 RAMKKLNTL 79
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 58.0 bits (134), Expect = 5e-08
Identities = 24/38 (63%), Positives = 34/38 (89%)
Frame = +3
Query: 156 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ + L+
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELS 93
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 58.0 bits (134), Expect = 5e-08
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Frame = +3
Query: 15 TTKISAGRKGITDKAIRIRPARLKG---LQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 185
T + G K + I+ R RL +QTK +K VRDL+ EVV HA ++K+ M+LLKV
Sbjct: 9 TNRHKLGNKSYKLRQIQYREDRLSRTNEIQTKLTKLVRDLIHEVVVHATFKKKDMQLLKV 68
Query: 186 SKDKRALKFLKRRLGTHIRA 245
+DK AL+F+ +HIRA
Sbjct: 69 FQDKLALRFMSG--PSHIRA 86
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 58.0 bits (134), Expect = 5e-08
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = +3
Query: 45 ITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVS--KD-KRALKFL 215
+T K +R RP++ KG K VR +++EV G + YEKR +EL K + KD K+A K
Sbjct: 19 LTKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPYEKRIIELFKTNQPKDLKKAGKLA 78
Query: 216 KRRLGTHIRAKRKVK 260
+RLGT+ R KRK++
Sbjct: 79 AKRLGTNRRGKRKIE 93
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 57.2 bits (132), Expect = 9e-08
Identities = 25/56 (44%), Positives = 40/56 (71%), Gaps = 3/56 (5%)
Frame = +3
Query: 96 TKHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRK 254
+K + ++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K K
Sbjct: 56 SKRKELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAK 111
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 56.8 bits (131), Expect = 1e-07
Identities = 28/62 (45%), Positives = 40/62 (64%)
Frame = +3
Query: 84 KGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKN 263
K + TK +RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+K +
Sbjct: 35 KQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDD 94
Query: 264 LA 269
+A
Sbjct: 95 IA 96
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 55.6 bits (128), Expect = 3e-07
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Frame = +3
Query: 99 KHSKFVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRK 254
K+ + D+VRE+ G + YEKR +EL+KV + KR+LK+ K++LGTH R K K
Sbjct: 39 KNKDLINDVVREIAGFSPYEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAK 93
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 54.8 bits (126), Expect = 5e-07
Identities = 24/56 (42%), Positives = 38/56 (67%)
Frame = +3
Query: 102 HSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
H +FV+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK K L+
Sbjct: 29 HQEFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 54.0 bits (124), Expect = 8e-07
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +3
Query: 99 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRK 254
KH + V+ ++ ++VG + EKR E L+V K+KRALK+ K+RLG AK+K
Sbjct: 38 KHLRAVKAIIADLVGLSPLEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKK 89
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 53.6 bits (123), Expect = 1e-06
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Frame = +3
Query: 18 TKISAG-RKGITDKAIRIRPARLKGLQTKHSKF--VRDLVREVVGHAQYEKRAMELLKVS 188
T I AG KG RP+ H K V+ ++ ++VG + E+R ELL+V
Sbjct: 13 TGIIAGFNKGYKTTRRARRPSSNDRYALPHKKLRAVKAIISDLVGFSPMERRVQELLRVG 72
Query: 189 KDKRALKFLKRRLGTHIRAKRK 254
KDKRALKF K+RLG+ AK++
Sbjct: 73 KDKRALKFCKKRLGSIKAAKKR 94
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = +3
Query: 177 LKVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
LKVSKDKRALKF+K+R+GTHIRAKRK + L+
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELS 31
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 50.0 bits (114), Expect = 1e-05
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 45 ITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKV 185
+T A ++R R +G TK +K VR+LVRE+ G A YE+R MELL V
Sbjct: 20 VTKNARKMRQNRKRGAATKKTKVVRELVREITGFAPYERRMMELLLV 66
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 48.4 bits (110), Expect = 4e-05
Identities = 24/50 (48%), Positives = 34/50 (68%)
Frame = +3
Query: 51 DKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKR 200
+K ++R ++ G TKH+KF+ + RE+ G A YE RA ELLKVSK K+
Sbjct: 70 NKGHKVRHSQCHGSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 46.8 bits (106), Expect = 1e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 93 QTKHSKFVRDLVR-EVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
+T+ S+F+ V E+ G + EK+A+ LL+ + +A K L++RLG+H RA KV+ LA
Sbjct: 42 ETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLA 101
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 39.9 bits (89), Expect = 0.014
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 96 TKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKR 221
TK V D++RE G YE+ M+LL+ DK+AL + K+
Sbjct: 25 TKRKHVVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKK 66
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 36.7 bits (81), Expect = 0.13
Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 QTKHSKF-VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNL 266
+T KF + ++ G ++EK+ +K+ +++ALK K++LG RAK+K+ ++
Sbjct: 9 KTNFKKFNINVVLTSTFGLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSI 67
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 32.3 bits (70), Expect = 2.9
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 99 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKVKNL 266
K KFV DL + Q + + ++ LK ++DK+ +KF+ RRL IR + K + L
Sbjct: 112 KDYKFVNDLRK------QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q9BZF9 Cluster: Uveal autoantigen with coiled-coil domains
and ankyrin repeats; n=32; Amniota|Rep: Uveal
autoantigen with coiled-coil domains and ankyrin repeats
- Homo sapiens (Human)
Length = 1416
Score = 31.5 bits (68), Expect = 5.1
Identities = 23/110 (20%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Frame = +3
Query: 3 KGHKTTKISAGRKGITDK-AIRIRPARLKGLQTKHSKFVRDLVREVVG-HAQYEKRAMEL 176
KG K T++ K ++ K A+ I + + +++ S V + +++V ++EK E+
Sbjct: 605 KGRKVTEMEGQAKELSAKLALSIPAEKFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEI 664
Query: 177 LKVSKDKRALKFLKRRLGTHIRAKRKVKNLATCSLR*GRQPPRLITITIK 326
++ KR L+ +K +L H++ + + + + G ++ +T+K
Sbjct: 665 RQL---KRELENVKAKLAQHVKPEEHEQVKSRLEQKSGELGKKITELTLK 711
>UniRef50_Q2L2W5 Cluster: Phage protein; n=1; Bordetella avium
197N|Rep: Phage protein - Bordetella avium (strain 197N)
Length = 416
Score = 31.1 bits (67), Expect = 6.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3
Query: 60 IRIRPARLKGLQTKHSKFVRDLVREVVGHAQ 152
+R ARL G+QTKH+K D V+ AQ
Sbjct: 286 LRAAQARLAGIQTKHAKAAADAATAVIKRAQ 316
>UniRef50_A6SKL1 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 713
Score = 31.1 bits (67), Expect = 6.7
Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Frame = -2
Query: 228 PIVASRTSEHAC----LLTP*VTP*PSSHIERVRQLRVLNHGQTWSVSFED 88
P V SR + H P P PS HI+ RQ R L H QT S SF+D
Sbjct: 273 PRVVSRIATHNTPGFLFAQPARRPGPSPHIQSARQPRTLRH-QTNSFSFDD 322
>UniRef50_A1ZKV6 Cluster: Putative uncharacterized protein; n=1;
Microscilla marina ATCC 23134|Rep: Putative
uncharacterized protein - Microscilla marina ATCC 23134
Length = 292
Score = 30.7 bits (66), Expect = 8.9
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Frame = +3
Query: 42 GITDKAIRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDK--RALKFL 215
G D+ I+ R ++KGL TK+SK ++LV + A++ LKV K K + ++ L
Sbjct: 55 GQLDRVIQERETQVKGLTTKNSKRKQELVEAI--------NALKGLKVEKQKLLKNVQTL 106
Query: 216 KRRLGTHIR 242
KR ++R
Sbjct: 107 KREHNINLR 115
>UniRef50_A0U4A5 Cluster: Putative uncharacterized protein; n=1;
Burkholderia cenocepacia MC0-3|Rep: Putative
uncharacterized protein - Burkholderia cenocepacia MC0-3
Length = 1489
Score = 30.7 bits (66), Expect = 8.9
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 63 RIRPARLKGLQTKHSKFVRDLVREVVGHAQYE--KRAMELLKVSKDKRALKFLKRRLGTH 236
R+R R+ GLQ H V DL AQ E +RA E + +RA R+G H
Sbjct: 211 RLRGLRVAGLQAAHRTLVHDLEHAAQARAQQERRRRAAEHVLPQHVRRA-----ERIGDH 265
Query: 237 IRA 245
RA
Sbjct: 266 ERA 268
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,096,809
Number of Sequences: 1657284
Number of extensions: 5118257
Number of successful extensions: 13232
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 13069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13225
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13647406432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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