Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0729.Seq
         (370 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B pr...   125   2e-29
BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p pro...   125   2e-29
AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p pro...   125   2e-29
AL031581-5|CAA20892.1|  115|Drosophila melanogaster EG:115C2.7,F...   125   2e-29
AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD, ...   125   2e-29
AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC, ...   125   2e-29
AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB, ...   125   2e-29
AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA, ...   125   2e-29
BT001654-1|AAN71409.1|  388|Drosophila melanogaster RE44531p pro...    27   7.7  
AY119602-1|AAM50256.1|  176|Drosophila melanogaster LD22339p pro...    27   7.7  
AE014297-1136|AAF54521.1|  288|Drosophila melanogaster CG12818-P...    27   7.7  
AE014134-1121|AAN10589.1|  388|Drosophila melanogaster CG11050-P...    27   7.7  
AE014134-1120|AAN10588.1|  388|Drosophila melanogaster CG11050-P...    27   7.7  
AE014134-1119|AAF52408.1|  388|Drosophila melanogaster CG11050-P...    27   7.7  

>U20543-1|AAA63151.1|  115|Drosophila melanogaster minute(1)1B
           protein protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>BT029917-1|ABM92791.1|  115|Drosophila melanogaster GH03995p
           protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>AY070831-1|AAL48453.1|  115|Drosophila melanogaster AT29875p
           protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>AL031581-5|CAA20892.1|  115|Drosophila melanogaster
           EG:115C2.7,FBgn0002579;RpL36 protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>AE014298-77|AAN09021.1|  115|Drosophila melanogaster CG7622-PD,
           isoform D protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>AE014298-76|AAN09020.1|  115|Drosophila melanogaster CG7622-PC,
           isoform C protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>AE014298-75|AAF45531.1|  115|Drosophila melanogaster CG7622-PB,
           isoform B protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>AE014298-74|AAN09019.1|  115|Drosophila melanogaster CG7622-PA,
           isoform A protein.
          Length = 115

 Score =  125 bits (302), Expect = 2e-29
 Identities = 64/90 (71%), Positives = 75/90 (83%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   KGHKTTKISAGRKGITDKAIR-IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELL 179
           KGHKT+KI    K   DK ++ +R +RLK +QT+H+KF+RDLVREVVGHA YEKR MELL
Sbjct: 13  KGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVGHAPYEKRTMELL 71

Query: 180 KVSKDKRALKFLKRRLGTHIRAKRKVKNLA 269
           KVSKDKRALKFLKRRLGTHIRAKRK + L+
Sbjct: 72  KVSKDKRALKFLKRRLGTHIRAKRKREELS 101


>BT001654-1|AAN71409.1|  388|Drosophila melanogaster RE44531p
           protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 182
           QT  SKFV+DL R ++V  A +YEKR   LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326


>AY119602-1|AAM50256.1|  176|Drosophila melanogaster LD22339p
           protein.
          Length = 176

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 182
           QT  SKFV+DL R ++V  A +YEKR   LLK
Sbjct: 83  QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 114


>AE014297-1136|AAF54521.1|  288|Drosophila melanogaster CG12818-PA
           protein.
          Length = 288

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 17/73 (23%), Positives = 37/73 (50%)
 Frame = +3

Query: 60  IRIRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI 239
           + I P +   ++TK +  +  + R+    A  EK   E L+ ++ +  + FL+R+ G   
Sbjct: 1   MNILPKKRWHVRTKEN--IARVRRDQAAAAAEEKVRQEKLEFAESEARINFLRRQSGLPE 58

Query: 240 RAKRKVKNLATCS 278
           +A ++ +  + CS
Sbjct: 59  KASKESREESQCS 71


>AE014134-1121|AAN10589.1|  388|Drosophila melanogaster CG11050-PC,
           isoform C protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 182
           QT  SKFV+DL R ++V  A +YEKR   LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326


>AE014134-1120|AAN10588.1|  388|Drosophila melanogaster CG11050-PB,
           isoform B protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 182
           QT  SKFV+DL R ++V  A +YEKR   LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326


>AE014134-1119|AAF52408.1|  388|Drosophila melanogaster CG11050-PA,
           isoform A protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
 Frame = +3

Query: 93  QTKHSKFVRDLVR-EVVGHA-QYEKRAMELLK 182
           QT  SKFV+DL R ++V  A +YEKR   LLK
Sbjct: 295 QTAESKFVKDLDRLDMVMQAFEYEKRDNCLLK 326


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,017,008
Number of Sequences: 53049
Number of extensions: 242431
Number of successful extensions: 719
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 964005624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)