Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0728.Seq
         (489 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   2.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   7.9  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   7.9  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 276 LVFLTCVCVRCTTVFYMFIIIY-FEIRNFEY 365
           LVF+ C  +   TV+Y++  ++   I NF Y
Sbjct: 143 LVFVFCYFIYLFTVYYIYYSVHEASIINFGY 173


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 276 LVFLTCVCVRCTTVFYMFIIIYF 344
           L+FL C+      +F++  I YF
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYF 149


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = -2

Query: 443 VWTCTRRFDVFAVCARAFRILYINII 366
           ++  T  F  FA+C     ++ +NI+
Sbjct: 68  MYAFTHIFFFFAICCDFIALIVVNIV 93


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 222 TSALESENAVIKEKLTDV---LVFLTCVCVRCTTV 317
           T+ L+SEN   KEKL      LV  T V V    V
Sbjct: 262 TNNLKSENEEFKEKLLAANLCLVIYTLVSVSLVMV 296


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 304 VVPPCFICLLLYIL 345
           VVP C+I  L+Y++
Sbjct: 215 VVPYCYINCLIYLI 228


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = +3

Query: 222 TSALESENAVIKEKLTDV---LVFLTCVCVRCTTV 317
           T+ L+SEN   KEKL      LV  T V V    V
Sbjct: 262 TNNLKSENEEFKEKLLAANLCLVIYTLVSVSLVMV 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,584
Number of Sequences: 336
Number of extensions: 1462
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)