Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0723.Seq
         (765 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9KB80 Cluster: BH2048 protein; n=1; Bacillus haloduran...    40   0.051
UniRef50_A7HKP4 Cluster: GCN5-related N-acetyltransferase; n=2; ...    36   0.83 

>UniRef50_Q9KB80 Cluster: BH2048 protein; n=1; Bacillus
           halodurans|Rep: BH2048 protein - Bacillus halodurans
          Length = 638

 Score = 40.3 bits (90), Expect = 0.051
 Identities = 14/22 (63%), Positives = 19/22 (86%)
 Frame = -1

Query: 75  HHEWVDRNLRFRMWRLYQNLEF 10
           H EWVDRN+RF+++RLY+N  F
Sbjct: 414 HQEWVDRNIRFKLFRLYENSPF 435


>UniRef50_A7HKP4 Cluster: GCN5-related N-acetyltransferase; n=2;
           Thermotogaceae|Rep: GCN5-related N-acetyltransferase -
           Fervidobacterium nodosum Rt17-B1
          Length = 285

 Score = 36.3 bits (80), Expect = 0.83
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
 Frame = -2

Query: 740 RFDSMHLNIGHVGGYYTMHXNXSNLGFIKISMGIIHNLSNKKVLCNCR-KYLYKYI 576
           R++   L+IG+  GY     N  N  FI        NLSN +++CNC   YL K I
Sbjct: 192 RYNYTRLHIGNTEGYVVWGKNEDNSVFIVDLAAKSENLSNWELICNCAIDYLSKQI 247


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,793,017
Number of Sequences: 1657284
Number of extensions: 14064437
Number of successful extensions: 25857
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25857
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)