Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0723.Seq
         (765 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450 CY...    27   0.84 
AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    26   1.1  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    26   1.1  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   3.4  

>AY176049-1|AAO19580.1|  515|Anopheles gambiae cytochrome P450
           CYP12F3 protein.
          Length = 515

 Score = 26.6 bits (56), Expect = 0.84
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = -2

Query: 308 LTIRLEIIPSS*KV*RNPKFGRLM 237
           LT +L+++PS  K    PKF RLM
Sbjct: 240 LTYQLDVLPSVWKYISTPKFNRLM 263


>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 580 YLYKYFRQLHRTFLLDKLWIIPIEILIKPRLDXF 681
           Y  ++  QL+ TF L  ++IIP+ ILI   L  F
Sbjct: 340 YTDRWQEQLYTTFTLVFMFIIPLLILIGTYLSTF 373


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 580 YLYKYFRQLHRTFLLDKLWIIPIEILIKPRLDXF 681
           Y  ++  QL+ TF L  ++IIP+ ILI   L  F
Sbjct: 341 YTDRWQEQLYTTFTLVFMFIIPLLILIGTYLSTF 374


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 441 PK*YYDG*VISVITIYIMKNLSSSVVRTTKSSQHTRRK*YAFEK 310
           PK +  G V++VI + ++  ++  ++    +S H RR+   FEK
Sbjct: 764 PKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHDRREFARFEK 807


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 774,452
Number of Sequences: 2352
Number of extensions: 16935
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)