BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0723.Seq
(765 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 24 1.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 4.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 4.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 22 5.4
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 22 5.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.5
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.5
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 24.2 bits (50), Expect = 1.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 575 KYIYINTFDNYTELFYWTNY 634
KY N ++NY + Y+ NY
Sbjct: 90 KYSNYNNYNNYNKKLYYKNY 109
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 103 NNYNTNYKKLQYYNIINIE 121
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.6 bits (46), Expect = 4.1
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = -3
Query: 409 SNYNLHYEKLIFFSSANNE 353
+NYN +Y+KL +++ N E
Sbjct: 99 NNYNTNYKKLQYYNIINIE 117
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 101 NNYNNYKKLYYNINY 115
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 99 NNYNNYKKLYYNINY 113
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY +L+Y NY
Sbjct: 109 NNYNNYKKLYYNINY 123
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 89 YNYNNYNNNYKPLYYNINY 107
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 89 YNYNNYNNNYKPLYYNINY 107
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 89 YNYNNYNNNYKPLYYNINY 107
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 89 YNYNNYNNNYKPLYYNINY 107
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 9.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 128 SIAST*E*KFKKTQTLGMIDLNKNELTS 211
+IAS F+ L +DL+ NELTS
Sbjct: 418 AIASIDPLAFRNCSDLKELDLSGNELTS 445
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 322 YNYNNYNNNYKPLYYNINY 340
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 322 YNYNNYNNNYKPLYYNINY 340
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 322 YNYNNYNNNYKPLYYNINY 340
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +2
Query: 578 YIYINTFDNYTELFYWTNY 634
Y Y N +NY L+Y NY
Sbjct: 311 YNYNNYNNNYKPLYYNINY 329
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.4 bits (43), Expect = 9.5
Identities = 6/15 (40%), Positives = 10/15 (66%)
Frame = +2
Query: 590 NTFDNYTELFYWTNY 634
N ++NY + Y+ NY
Sbjct: 336 NNYNNYNKKLYYKNY 350
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,389
Number of Sequences: 438
Number of extensions: 4694
Number of successful extensions: 33
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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