Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0719.Seq
         (835 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    27   0.18 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    24   1.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   5.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.2  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   6.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.1  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 9/35 (25%), Positives = 20/35 (57%)
 Frame = +2

Query: 8   ILFIYLYIYTHAYIRSFLIFIVYPISHALARVCRD 112
           +L ++LYI+T+  +  ++ +   PI H  + +  D
Sbjct: 132 VLQLFLYIFTYLSVTCYVTYAWSPIDHTESNIIND 166


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 4   KYFIYLFIYIYACI 45
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 4   KYFIYLFIYIYACI 45
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 4   KYFIYLFIYIYACI 45
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 4   KYFIYLFIYIYACI 45
           +YFIY+F+ ++ C+
Sbjct: 295 RYFIYMFVSVWKCL 308


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 464 PLSPAGVIAKRPAPIPFPTVGA 529
           P +   V+ K P   PF TVGA
Sbjct: 185 PTNKPVVVTKPPQAPPFATVGA 206


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -1

Query: 529 CANCWEGDRCGP 494
           C NC E +R GP
Sbjct: 293 CPNCQEAERLGP 304


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 516 GKGIGAGLFAITPAGERGM 460
           G G+GA L+ I   G RG+
Sbjct: 609 GYGLGAELYQIQEDGSRGV 627


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 688 WNTTQPLSRSILLIYKGFCRFRP 620
           WN     SR  L + K F  FRP
Sbjct: 272 WNVVFNGSRKNLDVMKSFVNFRP 294


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +1

Query: 625 EIGKIPYKSKE*TEIGVEWCSSLGTRVH*LKERG 726
           E GK+PY  K    +G E   S+  ++  +K +G
Sbjct: 329 EHGKVPYAYKGNQWVGYEDPESVQIKMDWIKSKG 362


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,696
Number of Sequences: 336
Number of extensions: 3656
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22932949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)