Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0719.Seq
         (835 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0036 + 3217163-3217584,3217752-3218322                           30   2.0  
10_08_0630 - 19410852-19411235,19411370-19412257,19412440-194129...    29   4.6  
05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,582...    29   6.0  
03_05_1097 + 30393336-30393578,30393661-30393780,30393859-303940...    29   6.0  

>09_02_0036 + 3217163-3217584,3217752-3218322
          Length = 330

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 380 ITIHWPSFYNVV-TGKTLALPNLIALQH 460
           I+  W  F N+V +G TL++PN + LQH
Sbjct: 69  ISAGWSRFINLVQSGPTLSIPNYVLLQH 96


>10_08_0630 -
           19410852-19411235,19411370-19412257,19412440-19412941,
           19413662-19414135,19414982-19415040,19415468-19415629
          Length = 822

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 413 VTGKTLALPNLIALQHIPLSPAGVIAKRPAPIPFPT 520
           +TG+T+ +P +IA   I + P    +++P P P P+
Sbjct: 401 ITGQTIPMPPIIAAPAITVMPPPAPSQQPQPPPPPS 436


>05_02_0030 + 5826065-5826092,5826307-5828309,5828412-5828732,
            5828821-5828907,5828981-5829583,5829680-5829844,
            5829941-5830235,5830320-5830534,5830621-5830926,
            5831200-5831263,5831384-5831623,5831756-5831853
          Length = 1474

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +2

Query: 401  FYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIPFPTVGAXE 535
            FY+ +    +++  +    H+P  P  VI  R  P  +P+ G  E
Sbjct: 1190 FYSNLENYIISVERIKQFMHLPAEPPAVITDRRPPPSWPSAGRIE 1234


>03_05_1097 +
           30393336-30393578,30393661-30393780,30393859-30394017,
           30394184-30394225,30394336-30394508,30394600-30394705,
           30394795-30394824
          Length = 290

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -1

Query: 688 WNTTQPLSRSILLIYKGFC 632
           W+TT P+S  +L  +KGFC
Sbjct: 214 WSTTPPVSADVLHQWKGFC 232


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,672,444
Number of Sequences: 37544
Number of extensions: 401035
Number of successful extensions: 989
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 966
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)