Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0719.Seq
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    24   5.0  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   5.0  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   8.7  

>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
 Frame = +3

Query: 123 LTADIIYLILLRTARARQHTHKTIRALQNTITDTEITXXXXXXXXXXXXXXXXXXXXXSS 302
           LTA+   ++ L+TA  R  T    RAL       E                       S 
Sbjct: 72  LTAERQRVMALQTALRRAQTQDEQRALNEGEVPPEPVANIHIPKLSELKDLKHNMIHNSQ 131

Query: 303 CR-FDCRRDTSALEGGPGT 356
            R FDC   T ++   PGT
Sbjct: 132 TRSFDCDSSTGSMASAPGT 150


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 21/79 (26%), Positives = 27/79 (34%), Gaps = 1/79 (1%)
 Frame = +3

Query: 123 LTADIIYLILLRTARARQHTHKTIRALQNTITDTEITXXXXXXXXXXXXXXXXXXXXXSS 302
           LTA+   ++ L+TA  R  T    RAL       E                       S 
Sbjct: 72  LTAERQRVMALQTALRRAQTQDEQRALNEGEVPPEPVANIHIPKLSELKDLKHNMIHNSQ 131

Query: 303 CR-FDCRRDTSALEGGPGT 356
            R FDC   T ++   PGT
Sbjct: 132 TRSFDCDSSTGSMASAPGT 150


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 424 NPGVTQLNRLAAHPPFASWRNS 489
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 797,954
Number of Sequences: 2352
Number of extensions: 15076
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)