Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0717.Seq
(694 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W4I3 Cluster: CG7038-PA; n=5; Diptera|Rep: CG7038-PA ... 125 9e-28
UniRef50_UPI0000D57313 Cluster: PREDICTED: similar to CG7038-PA;... 84 4e-15
UniRef50_Q56FI8 Cluster: Putative mitochondrial ribosomal protei... 76 7e-13
UniRef50_Q8TCC3 Cluster: 39S ribosomal protein L30, mitochondria... 75 2e-12
UniRef50_Q4S0N9 Cluster: Chromosome 2 SCAF14781, whole genome sh... 68 2e-10
UniRef50_UPI0000585270 Cluster: PREDICTED: hypothetical protein;... 68 3e-10
UniRef50_UPI00003C00AD Cluster: PREDICTED: similar to mitochondr... 64 3e-09
UniRef50_Q9UA63 Cluster: Putative uncharacterized protein W04B5.... 63 7e-09
UniRef50_Q5DDM7 Cluster: SJCHGC05377 protein; n=1; Schistosoma j... 52 1e-05
UniRef50_A7STG6 Cluster: Predicted protein; n=1; Nematostella ve... 47 5e-04
UniRef50_Q4CV16 Cluster: Putative uncharacterized protein; n=2; ... 40 0.058
UniRef50_UPI0000DC0A88 Cluster: UPI0000DC0A88 related cluster; n... 39 0.13
UniRef50_Q1YTF1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.31
UniRef50_Q9U0Z7 Cluster: Hypothetical transmembrane protein L568... 38 0.31
UniRef50_Q9X1J1 Cluster: 50S ribosomal protein L30; n=19; Bacter... 36 0.71
UniRef50_Q4UMR1 Cluster: 50S ribosomal protein L30; n=11; Bacter... 36 0.94
UniRef50_Q6N4V1 Cluster: 50S ribosomal protein L30; n=31; Alphap... 35 1.6
UniRef50_Q238S3 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_A0RUE6 Cluster: Ribosomal protein L30/L7E; n=2; Thermop... 34 3.8
UniRef50_UPI000049A390 Cluster: hypothetical protein 14.t00038; ... 33 5.0
UniRef50_Q3SSU8 Cluster: 50S ribosomal protein L30; n=18; Alphap... 33 5.0
UniRef50_Q8A494 Cluster: 50S ribosomal protein L30; n=39; cellul... 33 5.0
UniRef50_O25937 Cluster: DNA polymerase III epsilon subunit; n=7... 33 6.6
UniRef50_UPI00006CFEFA Cluster: Protein kinase domain containing... 33 8.8
UniRef50_A5K6S3 Cluster: RNA-binding protein, putative; n=1; Pla... 33 8.8
UniRef50_A0CT49 Cluster: Chromosome undetermined scaffold_27, wh... 33 8.8
>UniRef50_Q9W4I3 Cluster: CG7038-PA; n=5; Diptera|Rep: CG7038-PA -
Drosophila melanogaster (Fruit fly)
Length = 180
Score = 125 bits (302), Expect = 9e-28
Identities = 57/88 (64%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
K+ RV+RIK K PYW+ RIL +L + +++ TVVKNIPE NA+LWKIKHLIK+TP+
Sbjct: 56 KLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNARLWKIKHLIKVTPVT 115
Query: 423 FPYGEPTADDINYTILKENGQCLVTKKL 506
FPYGEPTA D+ +TILKENG+CLVTK L
Sbjct: 116 FPYGEPTAQDVRHTILKENGECLVTKDL 143
Score = 41.1 bits (92), Expect = 0.025
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 103 GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEITPSKL 252
G+LL +RS G KH Y G ITYYPR PD++DP + P+KL
Sbjct: 4 GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPVEPAKL 57
>UniRef50_UPI0000D57313 Cluster: PREDICTED: similar to CG7038-PA;
n=2; Tribolium castaneum|Rep: PREDICTED: similar to
CG7038-PA - Tribolium castaneum
Length = 180
Score = 83.8 bits (198), Expect = 4e-15
Identities = 41/94 (43%), Positives = 63/94 (67%), Gaps = 1/94 (1%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
KV RV+RIK+ K P+++K+IL E + +++ V +VKNIPE N +LWK+KHL++I P+
Sbjct: 54 KVFRVQRIKALKGVPHYEKKILAEFHLTGKQSDVVIVKNIPENNQRLWKVKHLVQIKPVT 113
Query: 423 FPYGEPTADDINYTILKENGQCLVTKKLDRNSAR 524
FP G P++ +LKENG+ K L+ + R
Sbjct: 114 FPDGFPSSP--KGAVLKENGELRAMKTLEPSEER 145
Score = 42.3 bits (95), Expect = 0.011
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 172 GIRYPGGITYYPRFPDYKDPEITPSKL 252
G++YPG YYPR+PD+KDP PSK+
Sbjct: 30 GVQYPG-FKYYPRYPDFKDPPYEPSKV 55
>UniRef50_Q56FI8 Cluster: Putative mitochondrial ribosomal protein
L30; n=2; Apocrita|Rep: Putative mitochondrial ribosomal
protein L30 - Lysiphlebus testaceipes (Greenbugs aphid
parastoid)
Length = 180
Score = 76.2 bits (179), Expect = 7e-13
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIHE-ETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
K++ V R K K P+W K +LD K+ E ++ +T+VKN PEI + LW+IKHLI++ P+
Sbjct: 56 KLLVVRRCKPYKGNPWWDKNVLDMFKLKESKSAITIVKNTPEICSLLWQIKHLIEVKPLH 115
Query: 423 FPYGEPTADDINYTILKENGQCLVTKKLD 509
P P D T L ENG L+ ++D
Sbjct: 116 APDKLPEKDGPQSTWLHENGDLLIAPRVD 144
Score = 36.3 bits (80), Expect = 0.71
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +1
Query: 193 ITYYPRFPDYKDPEITPSKLL 255
+ YYPR PD++DP I P+KLL
Sbjct: 38 VNYYPRHPDHEDPPIEPTKLL 58
>UniRef50_Q8TCC3 Cluster: 39S ribosomal protein L30, mitochondrial
precursor; n=27; Euteleostomi|Rep: 39S ribosomal protein
L30, mitochondrial precursor - Homo sapiens (Human)
Length = 161
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/86 (41%), Positives = 54/86 (62%)
Frame = +3
Query: 237 NSIKVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITP 416
N K+ V RIKS++ PYW+K I+ L + + V KNIP +NAKL +KHLI+I P
Sbjct: 62 NPHKLHIVTRIKSTRRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLIRIKP 121
Query: 417 IEFPYGEPTADDINYTILKENGQCLV 494
++ P G P ++++ T LK G+ +V
Sbjct: 122 LKLPQGLPAEENMSNTCLKSTGELVV 147
>UniRef50_Q4S0N9 Cluster: Chromosome 2 SCAF14781, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF14781, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 158
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +3
Query: 258 VERIKSSKHFPYWQKRILDELKIHEETRVTVV-KNIPEINAKLWKIKHLIKITPIEFPYG 434
V R++S PYW+K ++ L + +E+ V V+ KN P +N++L +KHL++I P++ PYG
Sbjct: 65 VTRVRSVIRRPYWEKDMIKHLGLEKESHVPVIHKNTPAVNSQLKFVKHLVRIQPLKTPYG 124
Query: 435 EPTADDINYTILKENGQCLVTKKL 506
P D+ T + G+ ++ + L
Sbjct: 125 LPAEQDMADTFINSKGELIIRRLL 148
>UniRef50_UPI0000585270 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 148
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/84 (35%), Positives = 53/84 (63%)
Frame = +3
Query: 258 VERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGE 437
V RI+S K PYW++ I+ +L++ + + + KN P +N+ L +++HLI+I P+ YG
Sbjct: 48 VWRIRSLKRRPYWERDIMKQLRLEDTRKPVIHKNTPLVNSLLTRVRHLIRIKPVNPVYGM 107
Query: 438 PTADDINYTILKENGQCLVTKKLD 509
P D T+L+ NG +V +K++
Sbjct: 108 PDG-DYEETLLQWNGDFIVKRKIE 130
>UniRef50_UPI00003C00AD Cluster: PREDICTED: similar to mitochondrial
ribosomal protein L30 CG7038-PA; n=1; Apis
mellifera|Rep: PREDICTED: similar to mitochondrial
ribosomal protein L30 CG7038-PA - Apis mellifera
Length = 177
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIHE-ETR--VTVVKNIPEINAKLWKIKHLIKITP 416
K++ V R+K K PYW+K+ L L E ET+ VKN PE+ LW +KHLIK+ P
Sbjct: 50 KILMVHRVKPFKGNPYWEKKTLKVLGFDEDETKRYPVFVKNTPEMCNLLWSVKHLIKVVP 109
Query: 417 IEFPYGEP-TADDINYTILKENG 482
++ P P T DD + +NG
Sbjct: 110 VKLPKNLPNTIDDFREYYIHDNG 132
>UniRef50_Q9UA63 Cluster: Putative uncharacterized protein W04B5.4;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein W04B5.4 - Caenorhabditis elegans
Length = 197
Score = 62.9 bits (146), Expect = 7e-09
Identities = 34/72 (47%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Frame = +3
Query: 288 PYWQKRILDEL--KIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYG-EPTADDIN 458
P W K+ ++ L + R+ V +N IN +LWKIKHLI++ P+EF G EPT DDI
Sbjct: 72 PKWTKKHVENLFGADFKVGRMEVFRNTELINTELWKIKHLIELRPVEFKNGVEPTEDDIF 131
Query: 459 YTILKENGQCLV 494
T L NGQC V
Sbjct: 132 STSLAPNGQCEV 143
>UniRef50_Q5DDM7 Cluster: SJCHGC05377 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC05377 protein - Schistosoma
japonicum (Blood fluke)
Length = 290
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Frame = +3
Query: 180 LPWGHNI--LSQIPRLQRS*NNSIKVVRVERIKSSKHFPYWQKRILDELKIHEETRV--- 344
L W + LS+ P + + + V R+K K ++++ IL++ + +T+
Sbjct: 51 LGWAKRLFRLSESPPAENQSDKPPLLHMVCRLKPLKGIIHYERAILEKYGLGRDTKNHSW 110
Query: 345 TVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDI 455
VVKNIP +N L++IKHL++I P+ F G P+ D+
Sbjct: 111 VVVKNIPSVNRDLYEIKHLVRIQPVIFKNGLPSESDL 147
>UniRef50_A7STG6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 82
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
K+ V I+S P+W+KR L L + + + V KN P +N L +KHL+ +TPI+
Sbjct: 22 KLHAVTLIRSGIRQPWWEKRTLKVLGLTKLHKTVVHKNTPAVNGLLRSVKHLVDVTPIK 80
>UniRef50_Q4CV16 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 236
Score = 39.9 bits (89), Expect = 0.058
Identities = 13/44 (29%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = +3
Query: 294 WQ-KRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
W+ R+L EL++ + + T+V +IP++ +LW+++H+++I ++
Sbjct: 93 WEINRMLRELRLEFKGQTTIVPDIPQVRKQLWRVRHVVRIDMLD 136
>UniRef50_UPI0000DC0A88 Cluster: UPI0000DC0A88 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0A88 UniRef100 entry -
Rattus norvegicus
Length = 149
Score = 38.7 bits (86), Expect = 0.13
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 234 NNSIKVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKIT 413
+N K+ V RI S K +W+K + EL++ + + K+I ++NAK +KHL++I
Sbjct: 80 HNPHKLHIVTRI-SIKRCLFWEKHTIKELRLQKAHSLQSHKDIQQVNAKPEVVKHLMRIQ 138
Query: 414 P 416
P
Sbjct: 139 P 139
>UniRef50_Q1YTF1 Cluster: Putative uncharacterized protein; n=1;
gamma proteobacterium HTCC2207|Rep: Putative
uncharacterized protein - gamma proteobacterium HTCC2207
Length = 923
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +3
Query: 204 SQIPRLQRS*NNSIKVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKL 383
SQ+ RL+ S N+S +VVR+E S + +LKI+ E R+ +V +PE+N+ L
Sbjct: 201 SQVTRLE-SVNSSTEVVRIEAEDSPQELRLAASWAAQQLKINPEQRIGIV--VPELNSSL 257
Query: 384 WKIKHLI 404
++ ++
Sbjct: 258 QRVARVV 264
>UniRef50_Q9U0Z7 Cluster: Hypothetical transmembrane protein
L5683.03; n=4; Trypanosomatidae|Rep: Hypothetical
transmembrane protein L5683.03 - Leishmania major
Length = 409
Score = 37.5 bits (83), Expect = 0.31
Identities = 12/44 (27%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Frame = +3
Query: 294 WQ-KRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
W+ R+L EL++ + TVV +IP + ++W+++H++++ ++
Sbjct: 271 WEVNRMLRELRLEFMGQTTVVPDIPPVRKRIWRVRHVVRVDQLD 314
>UniRef50_Q9X1J1 Cluster: 50S ribosomal protein L30; n=19;
Bacteria|Rep: 50S ribosomal protein L30 - Thermotoga
maritima
Length = 67
Score = 36.3 bits (80), Expect = 0.71
Identities = 15/59 (25%), Positives = 35/59 (59%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
K ++++ +KS + + QK + L + + +V + ++P+I + K+KHL+++ IE
Sbjct: 3 KKLKIKLVKSPIGYSWDQKDTVKRLGLKKLNQVVIKDDLPQIRGMIRKVKHLVEVEEIE 61
>UniRef50_Q4UMR1 Cluster: 50S ribosomal protein L30; n=11;
Bacteria|Rep: 50S ribosomal protein L30 - Rickettsia
felis (Rickettsia azadi)
Length = 63
Score = 35.9 bits (79), Expect = 0.94
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +3
Query: 234 NNSIKVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKI 410
NN I +++ ++KS+ Y Q+ L L +++ + +++N I + K+KHL+KI
Sbjct: 2 NNKINNIKITQVKSAIGRKYDQRLTLVGLGLNKINKSVILENTNSIKGMVEKVKHLLKI 60
>UniRef50_Q6N4V1 Cluster: 50S ribosomal protein L30; n=31;
Alphaproteobacteria|Rep: 50S ribosomal protein L30 -
Rhodopseudomonas palustris
Length = 64
Score = 35.1 bits (77), Expect = 1.6
Identities = 15/54 (27%), Positives = 34/54 (62%)
Frame = +3
Query: 249 VVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKI 410
+++VE+I S + Q+ L LK+++ RV +++ PE+ + K++HL+++
Sbjct: 7 MIKVEQIGSPIRRHHSQRETLIGLKLNKIGRVAELQDTPEVRGMIGKVQHLVRV 60
>UniRef50_Q238S3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1109
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +2
Query: 482 SMLGYKKIGPEFGQIQALEEFDSDRKKMNS 571
S L K IG E I+ E+F SDRKK+NS
Sbjct: 754 SQLSNKNIGDETNNIEIHEQFSSDRKKINS 783
>UniRef50_A0RUE6 Cluster: Ribosomal protein L30/L7E; n=2;
Thermoprotei|Rep: Ribosomal protein L30/L7E -
Cenarchaeum symbiosum
Length = 155
Score = 33.9 bits (74), Expect = 3.8
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 258 VERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI 404
V RIK P+W + L L++ ++ R T++++ L K+KH +
Sbjct: 7 VVRIKGQADVPHWAETTLKLLRLEKKHRATIIQSKENTRGMLDKVKHYV 55
>UniRef50_UPI000049A390 Cluster: hypothetical protein 14.t00038; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: hypothetical protein
14.t00038 - Entamoeba histolytica HM-1:IMSS
Length = 1194
Score = 33.5 bits (73), Expect = 5.0
Identities = 19/59 (32%), Positives = 32/59 (54%)
Frame = +3
Query: 300 KRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKITPIEFPYGEPTADDINYTILKE 476
K++ +E I + + + N N WK K L+ +T +E P GE T +++ TI+KE
Sbjct: 1058 KQLKNENTIVSDCLLDIQYNGYYDNLSYWKQKILLLLTQMETPVGEYTQNELVNTIIKE 1116
>UniRef50_Q3SSU8 Cluster: 50S ribosomal protein L30; n=18;
Alphaproteobacteria|Rep: 50S ribosomal protein L30 -
Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
Length = 64
Score = 33.5 bits (73), Expect = 5.0
Identities = 14/55 (25%), Positives = 34/55 (61%)
Frame = +3
Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKI 410
K ++VE+ S+ + Q+ L LK+++ R + +++ PEI + K++H++++
Sbjct: 6 KTIKVEQTGSAIRRHHSQRSTLVGLKLNKIGRTSELQDTPEIRGMIAKVRHIVRV 60
>UniRef50_Q8A494 Cluster: 50S ribosomal protein L30; n=39; cellular
organisms|Rep: 50S ribosomal protein L30 - Bacteroides
thetaiotaomicron
Length = 58
Score = 33.5 bits (73), Expect = 5.0
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 243 IKVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKI 410
+ ++++++KS P QKR LD L + + RV ++ I + K+KHL+ I
Sbjct: 1 MSTIKIKQVKSRIGAPADQKRTLDALGLRKLNRVVEHESTSSILGMVDKVKHLVAI 56
>UniRef50_O25937 Cluster: DNA polymerase III epsilon subunit; n=7;
Helicobacter|Rep: DNA polymerase III epsilon subunit -
Helicobacter pylori (Campylobacter pylori)
Length = 350
Score = 33.1 bits (72), Expect = 6.6
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -2
Query: 555 LSLSNSSRAWIWPNSGPIFL*PSIDHFL*GLCSLYHLQLVLHKEIQ 418
+SL+++ RAW+W G IFL P I +L L + +LHK+IQ
Sbjct: 4 ISLNSNKRAWMWWFQGVIFLNPKIVSWL--LKAYRMSDNLLHKDIQ 47
>UniRef50_UPI00006CFEFA Cluster: Protein kinase domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
kinase domain containing protein - Tetrahymena
thermophila SB210
Length = 327
Score = 32.7 bits (71), Expect = 8.8
Identities = 20/59 (33%), Positives = 33/59 (55%)
Frame = +3
Query: 234 NNSIKVVRVERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLIKI 410
N I++V+ + I H Y KRI+ +I E + + V+N EI KL K +++IK+
Sbjct: 47 NKHIQMVKNKAILQQMHEKYACKRIIYNKEISFEEQKSSVRNEIEILQKLGKYENVIKV 105
>UniRef50_A5K6S3 Cluster: RNA-binding protein, putative; n=1;
Plasmodium vivax|Rep: RNA-binding protein, putative -
Plasmodium vivax
Length = 475
Score = 32.7 bits (71), Expect = 8.8
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3
Query: 258 VERIKSSKHFPYWQKRILDELKIHEETRVTVVKNIPEINAKLWKIKHLI-KITPIEFPYG 434
VE++K+SK +K++ +E K E VVKN+ N +++K+K L +I IE +
Sbjct: 279 VEKVKASKEK---KKKLQEEKKKEENNCTIVVKNL-HYNTRVFKLKKLFEQIGEIEKIHL 334
Query: 435 EPTADDINYTILKENGQCLVTKKLDRNSARSRP*KNLIVIEKR*ILQPXKEILDIDG 605
+ N I + G VT K + N A S N +I+ R IL + L+ DG
Sbjct: 335 SKKVSEHN--IKRNRGYAFVTFK-NVNDATSALILNDSIIDGRSIL--VSKFLEDDG 386
>UniRef50_A0CT49 Cluster: Chromosome undetermined scaffold_27, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_27,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 280
Score = 32.7 bits (71), Expect = 8.8
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 145 RSKGYKHPGGIRY---PGGITYYPRFPDYKDPEITPSKLLE*SELNQANI-FHTGKKGYW 312
+ + +KH G + PG TY+ F Y E S++ + L Q NI +H GKK Y
Sbjct: 116 KKRNFKHYPGQPFSYAPGVPTYFEEFKAYHHIEHEESQVEKYQRLQQYNILYHPGKKYYM 175
Query: 313 MN 318
N
Sbjct: 176 FN 177
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 665,918,710
Number of Sequences: 1657284
Number of extensions: 13899740
Number of successful extensions: 30222
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 29305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30210
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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