Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0717.Seq
         (694 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-654|AAF45968.1|  180|Drosophila melanogaster CG7038-PA ...   125   5e-29
AY071518-1|AAL49140.1|  180|Drosophila melanogaster RE56957p pro...   124   1e-28
AY118497-1|AAM49866.1|  450|Drosophila melanogaster LD07917p pro...    30   2.6  
AE014298-1517|AAF47969.1|  450|Drosophila melanogaster CG1637-PC...    30   2.6  
BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p pro...    29   6.0  
AY051681-1|AAK93105.1|  777|Drosophila melanogaster LD23102p pro...    29   6.0  
AF035275-1|AAB87630.1|  777|Drosophila melanogaster zinc finger ...    29   6.0  
AE014134-1687|AAF52805.2|  777|Drosophila melanogaster CG3998-PA...    29   6.0  
AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA ...    29   6.0  

>AE014298-654|AAF45968.1|  180|Drosophila melanogaster CG7038-PA
           protein.
          Length = 180

 Score =  125 bits (302), Expect = 5e-29
 Identities = 57/88 (64%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
 Frame = +3

Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
           K+ RV+RIK  K  PYW+ RIL +L +  +++  TVVKNIPE NA+LWKIKHLIK+TP+ 
Sbjct: 56  KLFRVQRIKPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNARLWKIKHLIKVTPVT 115

Query: 423 FPYGEPTADDINYTILKENGQCLVTKKL 506
           FPYGEPTA D+ +TILKENG+CLVTK L
Sbjct: 116 FPYGEPTAQDVRHTILKENGECLVTKDL 143



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +1

Query: 103 GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEITPSKL 252
           G+LL         +RS G KH     Y  G     ITYYPR PD++DP + P+KL
Sbjct: 4   GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPVEPAKL 57


>AY071518-1|AAL49140.1|  180|Drosophila melanogaster RE56957p
           protein.
          Length = 180

 Score =  124 bits (299), Expect = 1e-28
 Identities = 56/88 (63%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
 Frame = +3

Query: 246 KVVRVERIKSSKHFPYWQKRILDELKIH-EETRVTVVKNIPEINAKLWKIKHLIKITPIE 422
           K+ RV+RI+  K  PYW+ RIL +L +  +++  TVVKNIPE NA+LWKIKHLIK+TP+ 
Sbjct: 56  KLFRVQRIRPLKGNPYWENRILKDLGLDGKQSDFTVVKNIPENNARLWKIKHLIKVTPVT 115

Query: 423 FPYGEPTADDINYTILKENGQCLVTKKL 506
           FPYGEPTA D+ +TILKENG+CLVTK L
Sbjct: 116 FPYGEPTAQDVRHTILKENGECLVTKDL 143



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
 Frame = +1

Query: 103 GKLLRNFNPLVSIIRSKGYKHPGGIRYPGG-----ITYYPRFPDYKDPEITPSKL 252
           G+LL         +RS G KH     Y  G     ITYYPR PD++DP + P+KL
Sbjct: 4   GRLLNPLRSTACSVRSYG-KHNKKFLYKNGQKFEGITYYPRTPDHQDPPVEPAKL 57


>AY118497-1|AAM49866.1|  450|Drosophila melanogaster LD07917p
           protein.
          Length = 450

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -3

Query: 461 VVYIICSWFSIRKFNWCNFNQMLDFP*FSIDFWYIFN----HSDSGLLMNFQFIQYPFLP 294
           V Y++C      K+N+ N+    + P  +   WY FN    H  S     + F+ Y F  
Sbjct: 204 VPYMVCPGNHEEKYNFSNYRARFNMPGETDSLWYSFNLGPVHFVSFSTEVYYFLSYGFKL 263

Query: 293 VWKMF 279
           + K F
Sbjct: 264 LTKQF 268


>AE014298-1517|AAF47969.1|  450|Drosophila melanogaster CG1637-PC,
           isoform C protein.
          Length = 450

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
 Frame = -3

Query: 461 VVYIICSWFSIRKFNWCNFNQMLDFP*FSIDFWYIFN----HSDSGLLMNFQFIQYPFLP 294
           V Y++C      K+N+ N+    + P  +   WY FN    H  S     + F+ Y F  
Sbjct: 204 VPYMVCPGNHEEKYNFSNYRARFNMPGETDSLWYSFNLGPVHFVSFSTEVYYFLSYGFKL 263

Query: 293 VWKMF 279
           + K F
Sbjct: 264 LTKQF 268


>BT021374-1|AAX33522.1|  821|Drosophila melanogaster LP02965p
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 EILIHWFLSFDQKVINIQEVFVTLGA*HTIPDSQITKI 229
           E + HW+LSF Q++I I+ +F+ +   + + +S +  I
Sbjct: 194 EKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSI 231


>AY051681-1|AAK93105.1|  777|Drosophila melanogaster LD23102p
           protein.
          Length = 777

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 378 KLWKIKHLIKITPIEFPYGEPTADD--INYTILKENGQCL-VTKKLDRNSARSRP*KNLI 548
           K WK  H +KI  I  PY +   DD  +N   +KE  + + V  KLD    +      + 
Sbjct: 401 KSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIY 460

Query: 549 VIEKR 563
           ++EKR
Sbjct: 461 LVEKR 465


>AF035275-1|AAB87630.1|  777|Drosophila melanogaster zinc finger 30C
           protein.
          Length = 777

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 378 KLWKIKHLIKITPIEFPYGEPTADD--INYTILKENGQCL-VTKKLDRNSARSRP*KNLI 548
           K WK  H +KI  I  PY +   DD  +N   +KE  + + V  KLD    +      + 
Sbjct: 401 KSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIY 460

Query: 549 VIEKR 563
           ++EKR
Sbjct: 461 LVEKR 465


>AE014134-1687|AAF52805.2|  777|Drosophila melanogaster CG3998-PA
           protein.
          Length = 777

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
 Frame = +3

Query: 378 KLWKIKHLIKITPIEFPYGEPTADD--INYTILKENGQCL-VTKKLDRNSARSRP*KNLI 548
           K WK  H +KI  I  PY +   DD  +N   +KE  + + V  KLD    +      + 
Sbjct: 401 KSWKCPHCVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKIY 460

Query: 549 VIEKR 563
           ++EKR
Sbjct: 461 LVEKR 465


>AE013599-589|AAF59135.2|  821|Drosophila melanogaster CG8711-PA
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 12/38 (31%), Positives = 24/38 (63%)
 Frame = +2

Query: 116 EILIHWFLSFDQKVINIQEVFVTLGA*HTIPDSQITKI 229
           E + HW+LSF Q++I I+ +F+ +   + + +S +  I
Sbjct: 194 EKINHWWLSFCQQMIMIRSIFLYMDRTYVLQNSTVHSI 231


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,942,388
Number of Sequences: 53049
Number of extensions: 604305
Number of successful extensions: 1240
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)