Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0714.Seq
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    62   2e-08
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    62   2e-08
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    62   2e-08
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    62   2e-08
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    46   7e-04
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    46   0.001
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    38   0.32 
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    38   0.32 
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    37   0.57 
UniRef50_UPI00015B9105 Cluster: UPI00015B9105 related cluster; n...    33   7.0  
UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2; ...    33   7.0  

>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEA 337
           WENPGVTQLNRLAA PPFASWRNSEEA
Sbjct: 77  WENPGVTQLNRLAAHPPFASWRNSEEA 103


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEA 337
           WENPGVTQLNRLAA PPFASWRNSEEA
Sbjct: 31  WENPGVTQLNRLAAHPPFASWRNSEEA 57


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEA 337
           WENPGVTQLNRLAA PPFASWRNSEEA
Sbjct: 35  WENPGVTQLNRLAAHPPFASWRNSEEA 61


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 61.7 bits (143), Expect = 2e-08
 Identities = 26/27 (96%), Positives = 26/27 (96%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEA 337
           WENPGVTQLNRLAA PPFASWRNSEEA
Sbjct: 17  WENPGVTQLNRLAAHPPFASWRNSEEA 43


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 46.4 bits (105), Expect = 7e-04
 Identities = 27/68 (39%), Positives = 33/68 (48%)
 Frame = +3

Query: 228 HWAVVLQRRTGKTXXXXXXXXXXXXXXSPAGVIAKRXRTDRPSQQLRXWXGRMAXCKR*Y 407
           HW       TGKT              SPAGVI++  RTDRPSQQLR    RMA   R +
Sbjct: 5   HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSLKWRMAPEWRYF 64

Query: 408 FVKIRVKF 431
            +   V++
Sbjct: 65  LLTQSVRY 72


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEAPHRSPFP 358
           WENP +TQ +RL A PPF SWR+ E A    P P
Sbjct: 24  WENPQITQYHRLEAHPPFHSWRDVESAQKDRPSP 57


>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 17/26 (65%), Positives = 19/26 (73%)
 Frame = -2

Query: 104 GAPTARRTNATTSFLTATILVYAIGA 27
           G P AR  + TTSFLTA  L+YAIGA
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGA 55


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEAPHRSPFPTVAXL 373
           W+NP +T +NRL +  P   WR+++ A    P   V  L
Sbjct: 27  WQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDAVLSL 65


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 36.7 bits (81), Expect = 0.57
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +2

Query: 257 WENPGVTQLNRLAAXPPFASWRNSEEAPHRSP 352
           W N  +T LNRL A P FASWR+   A    P
Sbjct: 23  WHNQTITHLNRLPAHPVFASWRDELAARDNLP 54


>UniRef50_UPI00015B9105 Cluster: UPI00015B9105 related cluster; n=1;
           unknown|Rep: UPI00015B9105 UniRef100 entry - unknown
          Length = 377

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +2

Query: 293 AAXPPFASWRNSEEAPHRSPFP 358
           AA  P ASWR +++AP RSP P
Sbjct: 355 AAPVPAASWRGAQDAPRRSPHP 376


>UniRef50_A5LFU4 Cluster: Putative uncharacterized protein; n=2;
          Streptococcus pneumoniae|Rep: Putative uncharacterized
          protein - Streptococcus pneumoniae SP3-BS71
          Length = 81

 Score = 33.1 bits (72), Expect = 7.0
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = +1

Query: 28 APIAYTKIVAVKKLVVAFVRRAVG 99
          APIAY K+VAVKKLVV    R  G
Sbjct: 9  APIAYIKVVAVKKLVVELWARLAG 32


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 613,339,506
Number of Sequences: 1657284
Number of extensions: 10750538
Number of successful extensions: 17925
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17922
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)