Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0714.Seq
         (714 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   7.2  
AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding pr...    23   7.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   9.5  

>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 281 LNRLAAXPPFASWRNSEEAPHRSPFPT 361
           LNR    PP+  +R  E    + PF T
Sbjct: 52  LNRTLVLPPWVEYRKGEVRSIQVPFDT 78


>AY146732-1|AAO12092.1|  327|Anopheles gambiae odorant-binding
           protein AgamOBP44 protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
 Frame = -1

Query: 171 PAFF-RTPAHR--RYLRKRVSXTRMRCTDSAAHKCNYELFN 58
           P FF R  A+   RYL K     R R   S   KC+ E++N
Sbjct: 209 PRFFVRDAAYNDLRYLSKETKACRDRIRQSGCDKCS-EVYN 248


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -2

Query: 218 TTHYRANWVPAPPILNRRFLERRLTD 141
           T+H R +    PP L+R  LER +TD
Sbjct: 384 TSHLRGS--RTPPELDREVLERIVTD 407


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,525
Number of Sequences: 2352
Number of extensions: 11324
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)