Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0711.Seq
         (839 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0365 - 16818468-16818514,16818619-16821706,16822860-168229...    29   6.1  
04_01_0599 + 7871933-7872004,7872696-7873168,7873257-7873334,787...    29   6.1  

>11_04_0365 -
           16818468-16818514,16818619-16821706,16822860-16822919,
           16823595-16823954
          Length = 1184

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +2

Query: 311 MNKLIRELELFKFEFTEIRLCIYLPSFIFQPFFCPRFLRYRERFYAVMRQP 463
           MNK  + L+  + +F+E+  C+++P  +   F  P+ +RY    Y  M+QP
Sbjct: 706 MNK--KHLQFLQLDFSEVE-CLHMPLQLGLNF-TPKEVRYENLQYQYMQQP 752


>04_01_0599 +
           7871933-7872004,7872696-7873168,7873257-7873334,
           7873446-7873665
          Length = 280

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 755 PRRLSWVTPGFSPVTTFVNDGQWNCNTTHYRA 660
           P R++ V PG S      +DG+W   T HY+A
Sbjct: 91  PERIATV-PGSSAAAFKHDDGKWKLRTKHYKA 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,569,202
Number of Sequences: 37544
Number of extensions: 347121
Number of successful extensions: 617
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)