Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0711.Seq
         (839 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   6.6  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   6.6  
AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal ...    23   8.7  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 656 WVPGPRCSGEVWVVLDWL 603
           W+  P C+    V+LDWL
Sbjct: 115 WIASPACTELEVVMLDWL 132


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 656 WVPGPRCSGEVWVVLDWL 603
           W+  P C+    V+LDWL
Sbjct: 146 WIASPACTELEVVMLDWL 163


>AY187042-1|AAO39756.1|  248|Anopheles gambiae putative antennal
           carrier protein TOL-2 protein.
          Length = 248

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 111 EVHSTLHTFRFYCRIPNVFKND 46
           ++ +T  T RFY  + N+F  D
Sbjct: 172 KIKATFDTTRFYMHLTNLFNGD 193


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,367
Number of Sequences: 2352
Number of extensions: 14485
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)