Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0711.Seq
         (839 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   3.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   3.5  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   4.6  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   8.1  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 360 KYDYVFTYLHLFSNLFSAPGFYDIAK 437
           KY  V + L +FS     P FY I K
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYK 423


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 360 KYDYVFTYLHLFSNLFSAPGFYDIAK 437
           KY  V + L +FS     P FY I K
Sbjct: 398 KYQIVPSALEIFSTSMKDPAFYRIYK 423


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 290 VVPTYL*MNKLIRELELFKFEFTEI 364
           +VPT   +NK  + LELF    T I
Sbjct: 85  IVPTTQEINKPFKRLELFNITTTTI 109


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +3

Query: 693 AVVYKRRDWGKPW 731
           A +Y+R +W  PW
Sbjct: 52  AALYERVEWSGPW 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,279
Number of Sequences: 438
Number of extensions: 3797
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)