Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0710.Seq
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.4  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   7.4  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   7.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   9.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +1

Query: 457 CRR*ITKATFYFSYSIAVLAGPE 525
           CR  +    FY+++S+A+L  P+
Sbjct: 114 CRDRVNPYLFYYAFSVALLHRPD 136


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +1

Query: 55  TVTELLNNAESNTINFSYKLWTTGHQNIVQSCFPLEFRLILDD 183
           T  E L N  S+   +  ++WTTG    V++     +R+IL +
Sbjct: 428 TQKEYLENLPSD--KYIIQIWTTGSDPQVRNLLDNGYRVILSN 468


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 265 THMATRTTIR--TVGSLCPRGNRTEFISKSLTRNTINV 372
           T+ A R  I   T+ SL P+G + + + KSL   + NV
Sbjct: 211 TYRAPRPWIHNETIYSLTPQGRKEQKVLKSLHSFSNNV 248


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 265 THMATRTTI--RTVGSLCPRGNRTEFISKSLTRNTINV 372
           T+ A R  I   T+ SL P+G + + + KSL   + NV
Sbjct: 211 TYRAPRPWIYNETIYSLTPQGRKEQKVLKSLHSFSNNV 248


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = -1

Query: 453 TIDLCCL*HRQMRTLYAHRPSQDHPFSNVDCISG 352
           T +  C  +R  +T+Y HRP Q    +    + G
Sbjct: 517 TGEAACDPYRPWQTVYNHRPWQQLHLNKKQILGG 550


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,896
Number of Sequences: 336
Number of extensions: 4205
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)