Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0706.Seq
         (894 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2418|AAS64828.1| 1402|Drosophila melanogaster CG30460-P...    33   0.70 
AE013599-2417|AAS64827.1| 1520|Drosophila melanogaster CG30460-P...    33   0.70 
AE013599-2415|AAF57906.3| 1868|Drosophila melanogaster CG30460-P...    33   0.70 
AY119466-1|AAM50120.1| 1132|Drosophila melanogaster GH03957p pro...    31   2.8  
AE013599-2416|AAS64826.1| 1132|Drosophila melanogaster CG30460-P...    31   2.8  
BT010312-1|AAQ23630.1| 1482|Drosophila melanogaster AT29286p pro...    29   6.5  
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    29   6.5  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    29   6.5  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    29   6.5  
AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein...    29   8.6  

>AE013599-2418|AAS64828.1| 1402|Drosophila melanogaster CG30460-PD,
           isoform D protein.
          Length = 1402

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 110 ARDITSSRLDDGYDPFESAARQMKELMSSESNIPKK 3
           A+  ++S L D YDPF SA RQ++EL S  +  P++
Sbjct: 429 AKRRSNSGLGDKYDPFLSAKRQLEELCSPSTPPPEE 464


>AE013599-2417|AAS64827.1| 1520|Drosophila melanogaster CG30460-PA,
           isoform A protein.
          Length = 1520

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 110 ARDITSSRLDDGYDPFESAARQMKELMSSESNIPKK 3
           A+  ++S L D YDPF SA RQ++EL S  +  P++
Sbjct: 547 AKRRSNSGLGDKYDPFLSAKRQLEELCSPSTPPPEE 582


>AE013599-2415|AAF57906.3| 1868|Drosophila melanogaster CG30460-PC,
            isoform C protein.
          Length = 1868

 Score = 32.7 bits (71), Expect = 0.70
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -2

Query: 110  ARDITSSRLDDGYDPFESAARQMKELMSSESNIPKK 3
            A+  ++S L D YDPF SA RQ++EL S  +  P++
Sbjct: 895  AKRRSNSGLGDKYDPFLSAKRQLEELCSPSTPPPEE 930


>AY119466-1|AAM50120.1| 1132|Drosophila melanogaster GH03957p
           protein.
          Length = 1132

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 86  LDDGYDPFESAARQMKELMSSESNIPKK 3
           L D YDPF SA RQ++EL S  +  P++
Sbjct: 167 LGDKYDPFLSAKRQLEELCSPSTPPPEE 194


>AE013599-2416|AAS64826.1| 1132|Drosophila melanogaster CG30460-PB,
           isoform B protein.
          Length = 1132

 Score = 30.7 bits (66), Expect = 2.8
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 86  LDDGYDPFESAARQMKELMSSESNIPKK 3
           L D YDPF SA RQ++EL S  +  P++
Sbjct: 167 LGDKYDPFLSAKRQLEELCSPSTPPPEE 194


>BT010312-1|AAQ23630.1| 1482|Drosophila melanogaster AT29286p
           protein.
          Length = 1482

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -2

Query: 86  LDDGYDPFESAARQMKELMSSESNIPKK 3
           L D YDPF SA RQ++EL +  +  P++
Sbjct: 517 LGDKYDPFLSAKRQLEELCAPSTPPPEE 544


>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 378 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 491
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 26  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 378 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 491
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 63  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 100


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 378 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 491
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 41  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


>AF313480-1|AAG29546.1| 2797|Drosophila melanogaster gamma dynein
            protein.
          Length = 2797

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +1

Query: 13   ILDSDDMSSFICLAADSNGS*PSSSLELVMSRASLACRALTPASPDEL 156
            +L+S ++   IC    S GS PSS++EL+  +  L C  ++     E+
Sbjct: 2425 LLESRELMPMICFL--SLGSDPSSNIELLAKKNELKCHPISMGQGQEI 2470


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,138,010
Number of Sequences: 53049
Number of extensions: 697893
Number of successful extensions: 1342
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1342
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4341591036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)