Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0703.Seq
         (577 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VKC5 Cluster: CG6770-PA; n=9; Arthropoda|Rep: CG6770-...   112   5e-24
UniRef50_A6YPH3 Cluster: DNA-binding nuclear protein p8; n=3; Pa...   111   1e-23
UniRef50_Q6WLC3 Cluster: P8 protein; n=2; Coelomata|Rep: P8 prot...    68   1e-10
UniRef50_A7T1V1 Cluster: Predicted protein; n=1; Nematostella ve...    65   1e-09
UniRef50_O60356 Cluster: Nuclear protein 1; n=5; Catarrhini|Rep:...    57   3e-07
UniRef50_Q98TC8 Cluster: XP8; n=5; Eumetazoa|Rep: XP8 - Xenopus ...    57   3e-07
UniRef50_Q9WTK0 Cluster: Nuclear protein 1; n=7; Theria|Rep: Nuc...    56   5e-07
UniRef50_UPI0000F2C4D2 Cluster: PREDICTED: similar to 4930579G22...    53   6e-06
UniRef50_UPI0001555AE4 Cluster: PREDICTED: similar to Gene produ...    48   2e-04
UniRef50_A6NF83 Cluster: Uncharacterized protein ENSP00000370281...    44   0.003
UniRef50_UPI0000E46543 Cluster: PREDICTED: hypothetical protein;...    37   0.39 
UniRef50_Q5BQT9 Cluster: SJCHGC09812 protein; n=1; Schistosoma j...    36   0.52 
UniRef50_UPI000155F4F8 Cluster: PREDICTED: hypothetical protein;...    36   0.68 
UniRef50_Q4S8P4 Cluster: Chromosome 7 SCAF14703, whole genome sh...    33   4.8  
UniRef50_A3UTD0 Cluster: Putative uncharacterized protein; n=6; ...    33   6.4  
UniRef50_A6BK95 Cluster: Putative uncharacterized protein; n=1; ...    32   8.4  

>UniRef50_Q9VKC5 Cluster: CG6770-PA; n=9; Arthropoda|Rep: CG6770-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 69

 Score =  112 bits (270), Expect = 5e-24
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = +1

Query: 79  MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQT 258
           MSEA FDEY++YNFDHDKHIF+GH GKQR K+EA+EHTNHFDP GHSRKI+TKLMN    
Sbjct: 1   MSEAHFDEYEHYNFDHDKHIFSGHSGKQRNKREANEHTNHFDPSGHSRKILTKLMNTNNN 60

Query: 259 RR 264
            +
Sbjct: 61  NK 62


>UniRef50_A6YPH3 Cluster: DNA-binding nuclear protein p8; n=3;
           Pancrustacea|Rep: DNA-binding nuclear protein p8 -
           Triatoma infestans (Assassin bug)
          Length = 73

 Score =  111 bits (266), Expect = 1e-23
 Identities = 47/72 (65%), Positives = 58/72 (80%)
 Frame = +1

Query: 79  MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQT 258
           MSE+ FDEY++YNFDHDKH+++G  GKQR+KKEASEHTNHFDP GHSRKIVTKL N E+ 
Sbjct: 1   MSESHFDEYEHYNFDHDKHMYSGASGKQRSKKEASEHTNHFDPSGHSRKIVTKLQNTEKK 60

Query: 259 RRLQTPNTRWIA 294
            +L     + +A
Sbjct: 61  TKLTNLQQKGVA 72


>UniRef50_Q6WLC3 Cluster: P8 protein; n=2; Coelomata|Rep: P8 protein
           - Branchiostoma belcheri tsingtauense
          Length = 79

 Score = 68.1 bits (159), Expect = 1e-10
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
 Frame = +1

Query: 91  FFDEYDYYNFDHDKHIFTGHG-GKQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQTRR 264
           ++DEY+YYNFD DK + +G G GK RTK+E   H+  FDP G+ R  VTK  N E+ R+
Sbjct: 15  YYDEYEYYNFDTDKIVASGQGSGKGRTKREQELHSTRFDPCGNVRITVTKFQNTERKRK 73


>UniRef50_A7T1V1 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 66

 Score = 65.3 bits (152), Expect = 1e-09
 Identities = 29/59 (49%), Positives = 40/59 (67%)
 Frame = +1

Query: 85  EAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQTR 261
           E +FDEYDYYNFD  +++  G+  K R+K+EA  +TN F P GH RK++ K  N E+ R
Sbjct: 2   EPYFDEYDYYNFD--RNVVEGNTRKGRSKREACLNTNRFCPGGHERKVLEKYRNTEKNR 58


>UniRef50_O60356 Cluster: Nuclear protein 1; n=5; Catarrhini|Rep:
           Nuclear protein 1 - Homo sapiens (Human)
          Length = 82

 Score = 57.2 bits (132), Expect = 3e-07
 Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQ-RTKKEASEHTNHFDPXGHSRKIVTK 237
           Q P     ++  DE D Y+  H    + G GG++ RTK+EA+ +TN   P GH RK+VTK
Sbjct: 13  QPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTNRPSPGGHERKLVTK 69

Query: 238 LMNAEQTRR 264
           L N+E+ +R
Sbjct: 70  LQNSERKKR 78


>UniRef50_Q98TC8 Cluster: XP8; n=5; Eumetazoa|Rep: XP8 - Xenopus
           laevis (African clawed frog)
          Length = 82

 Score = 56.8 bits (131), Expect = 3e-07
 Identities = 27/60 (45%), Positives = 37/60 (61%)
 Frame = +1

Query: 91  FFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQTRRLQ 270
           +FDEY+YYN   D++       K RTKKEA  +TN   P GH RKI +KL  +E  ++L+
Sbjct: 20  YFDEYEYYNLT-DRYSLPTAARKGRTKKEAEANTNRESPCGHERKISSKLQRSECKKKLK 78


>UniRef50_Q9WTK0 Cluster: Nuclear protein 1; n=7; Theria|Rep:
           Nuclear protein 1 - Mus musculus (Mouse)
          Length = 80

 Score = 56.4 bits (130), Expect = 5e-07
 Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
 Frame = +1

Query: 61  QMP-NVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTK 237
           Q P N+   +   DEYD Y+  H      G G K RTK+EA+ +TN   P GH RK++TK
Sbjct: 12  QQPLNLEDEDGILDEYDQYSLAHP--CVVGGGRKGRTKREAAANTNRPSPGGHERKLLTK 69

Query: 238 LMNAEQTR 261
             N+E+ +
Sbjct: 70  FQNSERKK 77


>UniRef50_UPI0000F2C4D2 Cluster: PREDICTED: similar to 4930579G22Rik
           protein; n=1; Monodelphis domestica|Rep: PREDICTED:
           similar to 4930579G22Rik protein - Monodelphis domestica
          Length = 112

 Score = 52.8 bits (121), Expect = 6e-06
 Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHG-GKQRTKKEASEHTNHFDPXGHSRKIVTK 237
           ++P  N  E  +D YDYYN    ++   G G  K RT++E    TN   P GH RKI  K
Sbjct: 33  ELPLANFEEEHYDCYDYYNLR--EYPIRGPGWSKGRTRRERELRTNRPVPAGHERKIAQK 90

Query: 238 LMNAEQTRRLQTPNTR 285
           L N+++ RR +   +R
Sbjct: 91  LYNSQRKRRQRQLQSR 106


>UniRef50_UPI0001555AE4 Cluster: PREDICTED: similar to Gene product
           with similarity to Rat P8; n=1; Ornithorhynchus
           anatinus|Rep: PREDICTED: similar to Gene product with
           similarity to Rat P8 - Ornithorhynchus anatinus
          Length = 176

 Score = 47.6 bits (108), Expect = 2e-04
 Identities = 21/43 (48%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
 Frame = +1

Query: 139 FTGHGGKQ-RTKKEASEHTNHFDPXGHSRKIVTKLMNAEQTRR 264
           F+G G ++ R+KKEA+ HTN   P GH RK++TKL N E+ ++
Sbjct: 130 FSGGGARKGRSKKEAAIHTNRPSPGGHERKLLTKLQNTEKKKQ 172


>UniRef50_A6NF83 Cluster: Uncharacterized protein ENSP00000370281;
           n=11; Eutheria|Rep: Uncharacterized protein
           ENSP00000370281 - Homo sapiens (Human)
          Length = 97

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 23/66 (34%), Positives = 33/66 (50%)
 Frame = +1

Query: 67  PNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKLMN 246
           P ++  E  +D  DYY          G   K RT++E +  TN   P GH RK+  KL+N
Sbjct: 20  PPISYEEELYDCLDYYYLRDFPACGAGRS-KGRTRREQALRTNWPAPGGHERKVAQKLLN 78

Query: 247 AEQTRR 264
            ++ RR
Sbjct: 79  GQRKRR 84


>UniRef50_UPI0000E46543 Cluster: PREDICTED: hypothetical protein;
           n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
           hypothetical protein - Strongylocentrotus purpuratus
          Length = 70

 Score = 36.7 bits (81), Expect = 0.39
 Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
 Frame = +1

Query: 79  MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKE-ASEHTNHFDPXGHSRKIVTKLMNAEQ 255
           MSE  FD+ ++YN+D    I +G  GK  +KKE A++  N+      +R +  ++ N+EQ
Sbjct: 1   MSEDHFDDLEHYNYD---PIHSGASGKGLSKKEKATKEHNNPHTTKEARLVEDQITNSEQ 57

Query: 256 TRR 264
            ++
Sbjct: 58  KKK 60


>UniRef50_Q5BQT9 Cluster: SJCHGC09812 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC09812 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 62

 Score = 36.3 bits (80), Expect = 0.52
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +1

Query: 112 YNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKI-VTKLMNAEQTRRLQ 270
           YN++ DK I  G GGK RTKK+A +H  H      + +I V   +N E+ +R Q
Sbjct: 2   YNYEEDK-IAGGKGGKNRTKKDAEDH--HKKSENRTNRIHVDHQVNNEEKQREQ 52


>UniRef50_UPI000155F4F8 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 197

 Score = 35.9 bits (79), Expect = 0.68
 Identities = 16/36 (44%), Positives = 22/36 (61%)
 Frame = +1

Query: 157 KQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQTRR 264
           K R+++E    TN   P GH RKI  KL+N ++ RR
Sbjct: 149 KGRSRRERELRTNRPVPVGHERKIAQKLVNGQRKRR 184


>UniRef50_Q4S8P4 Cluster: Chromosome 7 SCAF14703, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 7 SCAF14703, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 235

 Score = 33.1 bits (72), Expect = 4.8
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = -3

Query: 287 HLVFGV*SLLVC--SAFMSFVTIFLECPXGSKW 195
           HL+ G+   L+C  S +  F+T+ + CP GSKW
Sbjct: 202 HLIRGIAFYLLCISSLYYIFITLCVVCPPGSKW 234


>UniRef50_A3UTD0 Cluster: Putative uncharacterized protein; n=6;
           Vibrionales|Rep: Putative uncharacterized protein -
           Vibrio splendidus 12B01
          Length = 245

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
 Frame = +1

Query: 97  DEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNH-FDPXGHSRKIVTKLMNAEQTRRLQT 273
           D  D+   DH +H    H G    +    +H  H     GH    V          +L T
Sbjct: 147 DHDDHEGHDHAEHGHDDHEGHDHAEHGHDDHEGHDHSEGGHGEFTVEYHYQCSDIEKLDT 206

Query: 274 PNTRWIA 294
            NT+W +
Sbjct: 207 VNTQWFS 213


>UniRef50_A6BK95 Cluster: Putative uncharacterized protein; n=1;
           Dorea longicatena DSM 13814|Rep: Putative
           uncharacterized protein - Dorea longicatena DSM 13814
          Length = 315

 Score = 32.3 bits (70), Expect = 8.4
 Identities = 14/44 (31%), Positives = 24/44 (54%)
 Frame = -2

Query: 378 HSSGXRNSVLLSFGNSIVLLLDHSCLLISNPSSVWCLKSSCLLG 247
           H+SG +  ++   GN I +L+  +CLL+ N        + C+LG
Sbjct: 112 HTSGVKGGIITGLGNFIAILM--ACLLVRNEKMTGRKLAGCILG 153


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 486,342,343
Number of Sequences: 1657284
Number of extensions: 8170594
Number of successful extensions: 18304
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18282
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39571085965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)