Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0703.Seq
         (577 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-2140|AAF53151.1|   69|Drosophila melanogaster CG6770-PA...   112   3e-25
AF184229-1|AAD55740.1|  919|Drosophila melanogaster BcDNA.LD2797...    29   6.0  
AE014297-2297|AAF55382.1|  968|Drosophila melanogaster CG5208-PA...    29   6.0  

>AE014134-2140|AAF53151.1|   69|Drosophila melanogaster CG6770-PA
           protein.
          Length = 69

 Score =  112 bits (270), Expect = 3e-25
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = +1

Query: 79  MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKLMNAEQT 258
           MSEA FDEY++YNFDHDKHIF+GH GKQR K+EA+EHTNHFDP GHSRKI+TKLMN    
Sbjct: 1   MSEAHFDEYEHYNFDHDKHIFSGHSGKQRNKREANEHTNHFDPSGHSRKILTKLMNTNNN 60

Query: 259 RR 264
            +
Sbjct: 61  NK 62


>AF184229-1|AAD55740.1|  919|Drosophila melanogaster BcDNA.LD27979
           protein.
          Length = 919

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKL 240
           Q+  +N    + D+Y Y  F   K    G     +  K+   +     P GH++ I+ +L
Sbjct: 469 QLSQLNTDTPYIDDYYYTVFRERKAQQNGQMRNSQAHKDNQLNHPLTQPRGHAQLILVQL 528

Query: 241 MNAEQTR 261
            N   TR
Sbjct: 529 GNKNGTR 535


>AE014297-2297|AAF55382.1|  968|Drosophila melanogaster CG5208-PA
           protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 17/67 (25%), Positives = 28/67 (41%)
 Frame = +1

Query: 61  QMPNVNMSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPXGHSRKIVTKL 240
           Q+  +N    + D+Y Y  F   K    G     +  K+   +     P GH++ I+ +L
Sbjct: 518 QLSQLNTDTPYIDDYYYTVFRERKAQQNGQMRNSQAHKDNQLNHPLTQPRGHAQLILVQL 577

Query: 241 MNAEQTR 261
            N   TR
Sbjct: 578 GNKNGTR 584


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,270,255
Number of Sequences: 53049
Number of extensions: 400744
Number of successful extensions: 859
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2276053890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)