Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0700.Seq
         (533 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.           23   8.5  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   8.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   8.5  

>EF519369-1|ABP68478.1|  506|Anopheles gambiae LRIM1 protein.
          Length = 506

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 14/52 (26%), Positives = 24/52 (46%)
 Frame = +3

Query: 234 EDVGNGESAIAELKERRXSSLQAIKKYIAAQYKVDAEKLAPFIRKYLKNAVE 389
           E V NG  A AEL      ++  I+   A + +   + L   +++Y +  VE
Sbjct: 396 EQVSNGRRAHAELDGTLQQAVGQIELQHATEEQSPLQPLRAIVKRYEEMYVE 447


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -2

Query: 148 PELEFQSQQRYLPSXXXXXXXXLYTHTQKHKRFQY 44
           PE  FQS + ++P            H  K + F +
Sbjct: 207 PEFHFQSHKEWVPQPQWLEEDQHVFHVVKSRNFDH 241


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 22.6 bits (46), Expect = 8.5
 Identities = 9/35 (25%), Positives = 14/35 (40%)
 Frame = -2

Query: 148 PELEFQSQQRYLPSXXXXXXXXLYTHTQKHKRFQY 44
           PE  FQS + ++P            H  K + F +
Sbjct: 207 PEFHFQSHKEWVPQPQWLEEDQHVFHVVKSRNFDH 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,709
Number of Sequences: 2352
Number of extensions: 6247
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)