Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0695.Seq
         (895 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC113701-1|AAI13702.1|  814|Homo sapiens G protein-coupled recep...    32   3.2  
AF488739-1|AAN03795.1|  814|Homo sapiens GABAB-related G-protein...    32   3.2  

>BC113701-1|AAI13702.1|  814|Homo sapiens G protein-coupled receptor
           156 protein.
          Length = 814

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = -2

Query: 261 INLLILFVFLCNNTKRLVVSWPRVVRAGVSESGFGFVASSCVNAVYWRSVARSFSSTAS* 82
           +NLL+L   L     R + SWP +V  G++  G  FV ++ +N   +    + + +    
Sbjct: 264 VNLLVLAAGLLFVVTRYLHSWPNLV-FGLTSGGI-FVCTTTINCFIFIPQLKQWKAFEEE 321

Query: 81  DASERSVAWMYF*TPTRDFFRASNELE 1
           + + R +A  YF TP + F     E E
Sbjct: 322 NQTIRRMA-KYFSTPNKSFHTQYGEEE 347


>AF488739-1|AAN03795.1|  814|Homo sapiens GABAB-related G-protein
           coupled receptor protein.
          Length = 814

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 24/87 (27%), Positives = 41/87 (47%)
 Frame = -2

Query: 261 INLLILFVFLCNNTKRLVVSWPRVVRAGVSESGFGFVASSCVNAVYWRSVARSFSSTAS* 82
           +NLL+L   L     R + SWP +V  G++  G  FV ++ +N   +    + + +    
Sbjct: 264 VNLLVLAAGLLFVVTRYLHSWPNLV-FGLTSGGI-FVCTTTINCFIFIPQLKQWKAFEEE 321

Query: 81  DASERSVAWMYF*TPTRDFFRASNELE 1
           + + R +A  YF TP + F     E E
Sbjct: 322 NQTIRRMA-KYFSTPNKSFHTQYGEEE 347


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,769,733
Number of Sequences: 237096
Number of extensions: 2706240
Number of successful extensions: 5394
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5394
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)