Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0693.Seq
         (497 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119034-1|AAM50894.1|  174|Drosophila melanogaster LP05734p pro...    28   8.1  
AY060412-1|AAL25451.1|  174|Drosophila melanogaster LD36162p pro...    28   8.1  
AY051535-1|AAK92959.1|  576|Drosophila melanogaster GH18690p pro...    28   8.1  
AE014296-1628|AAN11962.1|  174|Drosophila melanogaster CG4460-PB...    28   8.1  
AE014296-1627|AAF50290.1|  174|Drosophila melanogaster CG4460-PA...    28   8.1  

>AY119034-1|AAM50894.1|  174|Drosophila melanogaster LP05734p
           protein.
          Length = 174

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 261 EKEAKQPGTVTRYVMQRFTLPQEVIT*KITS 353
           ++EA+Q G  +R+ ++RF LP+     K+TS
Sbjct: 94  QQEAEQGGYSSRHFLRRFVLPEGYEADKVTS 124


>AY060412-1|AAL25451.1|  174|Drosophila melanogaster LD36162p
           protein.
          Length = 174

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 261 EKEAKQPGTVTRYVMQRFTLPQEVIT*KITS 353
           ++EA+Q G  +R+ ++RF LP+     K+TS
Sbjct: 94  QQEAEQGGYSSRHFLRRFVLPEGYEADKVTS 124


>AY051535-1|AAK92959.1|  576|Drosophila melanogaster GH18690p
           protein.
          Length = 576

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +2

Query: 200 KRYMNN*ELHTFLVPLSYGERKRSQTAWYRNALRN 304
           KRY  N    TFL   +Y ERK     W R   R+
Sbjct: 496 KRYYENVHYDTFLATTTYVERKERYGKWKRAVERS 530


>AE014296-1628|AAN11962.1|  174|Drosophila melanogaster CG4460-PB,
           isoform B protein.
          Length = 174

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 261 EKEAKQPGTVTRYVMQRFTLPQEVIT*KITS 353
           ++EA+Q G  +R+ ++RF LP+     K+TS
Sbjct: 94  QQEAEQGGYSSRHFLRRFVLPEGYEADKVTS 124


>AE014296-1627|AAF50290.1|  174|Drosophila melanogaster CG4460-PA,
           isoform A protein.
          Length = 174

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +3

Query: 261 EKEAKQPGTVTRYVMQRFTLPQEVIT*KITS 353
           ++EA+Q G  +R+ ++RF LP+     K+TS
Sbjct: 94  QQEAEQGGYSSRHFLRRFVLPEGYEADKVTS 124


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,595,003
Number of Sequences: 53049
Number of extensions: 316157
Number of successful extensions: 502
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)