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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0691.Seq
         (914 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P0AAU6 Cluster: Uncharacterized protein ybfB; n=3; cell...   109   1e-22
UniRef50_Q7DC26 Cluster: RhsC protein in rhs element; n=1; Esche...    63   8e-09
UniRef50_Q31U53 Cluster: Putative uncharacterized protein; n=2; ...    51   5e-05
UniRef50_P16919 Cluster: Protein rhsD precursor; n=144; Enteroba...    50   6e-05
UniRef50_P77779 Cluster: Uncharacterized protein ybfO; n=18; Ent...    50   1e-04
UniRef50_Q57ML0 Cluster: Putative uncharacterized protein yibJ; ...    40   0.067
UniRef50_Q08932 Cluster: Ribosome assembly 1 protein; n=2; Sacch...    39   0.20 
UniRef50_Q7NY44 Cluster: Probable Rhs-family protein; n=2; Chrom...    37   0.62 
UniRef50_Q7MZK7 Cluster: Similar to the N-terminal region of Rhs...    36   1.1  
UniRef50_Q00WM6 Cluster: Ubiquitin-protein ligase 2; n=1; Ostreo...    36   1.4  
UniRef50_Q8U3F9 Cluster: Integral membrane glycosyltransferase; ...    36   1.9  
UniRef50_Q395C2 Cluster: Rhs family protein; n=1; Burkholderia s...    35   2.5  
UniRef50_Q4ZLF3 Cluster: YD repeat; n=3; Pseudomonas syringae pv...    35   3.3  
UniRef50_Q58715 Cluster: Uncharacterized sodium-dependent transp...    35   3.3  
UniRef50_Q7MZK5 Cluster: Similar to Rhs-family protein; n=2; Gam...    34   4.4  
UniRef50_Q6LUC6 Cluster: Hypothetical nucleotidyltransferase; n=...    34   4.4  
UniRef50_Q6LUC4 Cluster: Putative uncharacterized protein; n=1; ...    34   4.4  
UniRef50_Q6CZ75 Cluster: Rhs-family protein; n=3; Pectobacterium...    34   4.4  
UniRef50_A6GLW0 Cluster: Rhs family protein; n=1; Limnobacter sp...    34   4.4  
UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=...    34   5.8  
UniRef50_Q74QM5 Cluster: Rhs family protein; n=7; Yersinia|Rep: ...    34   5.8  
UniRef50_Q4K3M9 Cluster: Rhs family protein; n=2; Pseudomonas fl...    34   5.8  
UniRef50_Q2SFR5 Cluster: Rhs family protein; n=2; Hahella chejue...    34   5.8  
UniRef50_Q13ML3 Cluster: YD repeat protein; n=1; Burkholderia xe...    34   5.8  
UniRef50_A7K3Q8 Cluster: Rhs family protein; n=5; Vibrio|Rep: Rh...    34   5.8  
UniRef50_A2QYX4 Cluster: Contig An12c0080, complete genome; n=1;...    34   5.8  
UniRef50_UPI000023DD5E Cluster: hypothetical protein FG03877.1; ...    33   7.7  
UniRef50_Q2SPP2 Cluster: Rhs family protein; n=3; Hahella chejue...    33   7.7  
UniRef50_Q8D1M9 Cluster: Rhs-like core protein; n=10; Enterobact...    33   7.7  
UniRef50_A7MQ44 Cluster: Putative uncharacterized protein; n=2; ...    33   7.7  
UniRef50_A1TQS0 Cluster: YD repeat protein; n=1; Acidovorax aven...    33   7.7  
UniRef50_A1TJG7 Cluster: YD repeat protein; n=3; Acidovorax aven...    33   7.7  
UniRef50_A1FBV2 Cluster: RHS protein; n=30; Pseudomonas|Rep: RHS...    33   7.7  

>UniRef50_P0AAU6 Cluster: Uncharacterized protein ybfB; n=3;
           cellular organisms|Rep: Uncharacterized protein ybfB -
           Escherichia coli O157:H7
          Length = 108

 Score =  109 bits (261), Expect = 1e-22
 Identities = 56/58 (96%), Positives = 56/58 (96%), Gaps = 2/58 (3%)
 Frame = -2

Query: 262 ILF--MHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRI 95
           ILF  MHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRI
Sbjct: 19  ILFFSMHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDIIGVRI 76



 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 23/23 (100%), Positives = 23/23 (100%)
 Frame = -3

Query: 321 MKYIIFLFRAIWLALSLLILFFS 253
           MKYIIFLFRAIWLALSLLILFFS
Sbjct: 1   MKYIIFLFRAIWLALSLLILFFS 23


>UniRef50_Q7DC26 Cluster: RhsC protein in rhs element; n=1;
           Escherichia coli O157:H7|Rep: RhsC protein in rhs
           element - Escherichia coli O157:H7
          Length = 73

 Score = 63.3 bits (147), Expect = 8e-09
 Identities = 35/55 (63%), Positives = 39/55 (70%)
 Frame = -2

Query: 718 QIYGGKSRFYHQYLCVPRW*RGLYLWWPKTNGENQKEMVYGGQVKQVMIQKKLLA 554
           QIYGG     + +  V +  +G  L   KTNGENQKEMVYGGQVKQVMIQKKLLA
Sbjct: 6   QIYGGIRSIINIF--VSQMVKGTILVVAKTNGENQKEMVYGGQVKQVMIQKKLLA 58



 Score = 41.5 bits (93), Expect = 0.029
 Identities = 27/62 (43%), Positives = 34/62 (54%)
 Frame = -3

Query: 693 SIINIFVSPDGKGDYTCGGPRPTGRIKRRWSMGAR*SK**YKRSCWPVVTSLKPIIVVWR 514
           SIINIFVS   KG       +  G  ++    G +  +   ++    VVTSLKPIIVVWR
Sbjct: 13  SIINIFVSQMVKGTILVVA-KTNGENQKEMVYGGQVKQVMIQKKLLAVVTSLKPIIVVWR 71

Query: 513 TV 508
           TV
Sbjct: 72  TV 73


>UniRef50_Q31U53 Cluster: Putative uncharacterized protein; n=2;
           Shigella boydii|Rep: Putative uncharacterized protein -
           Shigella boydii serotype 4 (strain Sb227)
          Length = 927

 Score = 50.8 bits (116), Expect = 5e-05
 Identities = 18/25 (72%), Positives = 23/25 (92%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNIDP 791
           QDP GLKGGWNFY YPL+P++++DP
Sbjct: 875 QDPIGLKGGWNFYQYPLSPVNSMDP 899


>UniRef50_P16919 Cluster: Protein rhsD precursor; n=144;
            Enterobacteriaceae|Rep: Protein rhsD precursor -
            Escherichia coli (strain K12)
          Length = 1426

 Score = 50.4 bits (115), Expect = 6e-05
 Identities = 19/25 (76%), Positives = 20/25 (80%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            QDP GLKGGWN Y YPLNP+  IDP
Sbjct: 1231 QDPMGLKGGWNLYQYPLNPLQQIDP 1255


>UniRef50_P77779 Cluster: Uncharacterized protein ybfO; n=18;
           Enterobacteriaceae|Rep: Uncharacterized protein ybfO -
           Escherichia coli (strain K12)
          Length = 477

 Score = 49.6 bits (113), Expect = 1e-04
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNID 794
           QDP GLKGGWNFY YPLNP+  ID
Sbjct: 298 QDPIGLKGGWNFYQYPLNPVQYID 321


>UniRef50_Q57ML0 Cluster: Putative uncharacterized protein yibJ;
           n=1; Salmonella choleraesuis|Rep: Putative
           uncharacterized protein yibJ - Salmonella choleraesuis
          Length = 245

 Score = 40.3 bits (90), Expect = 0.067
 Identities = 17/25 (68%), Positives = 18/25 (72%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNIDP 791
           QD  GL GG N Y YPLNP+ NIDP
Sbjct: 54  QDSIGLSGGLNPYTYPLNPVVNIDP 78


>UniRef50_Q08932 Cluster: Ribosome assembly 1 protein; n=2;
           Saccharomyces cerevisiae|Rep: Ribosome assembly 1
           protein - Saccharomyces cerevisiae (Baker's yeast)
          Length = 381

 Score = 38.7 bits (86), Expect = 0.20
 Identities = 18/59 (30%), Positives = 28/59 (47%)
 Frame = +2

Query: 20  SGLPGPLGQGEHADSFSVARVRTQDNPYANNV*YSPYKY*SNKEYYACWKTYYHHSIRH 196
           S LP P   G  +D +  ++++ Q    A N  YSP+ Y ++  Y   W T Y   + H
Sbjct: 15  SRLPKPTYSGTLSDGYDESKIKRQKTDSAFNAAYSPHMYPNSPYYEGSWNTGYTPQLHH 73


>UniRef50_Q7NY44 Cluster: Probable Rhs-family protein; n=2;
            Chromobacterium violaceum|Rep: Probable Rhs-family
            protein - Chromobacterium violaceum
          Length = 1513

 Score = 37.1 bits (82), Expect = 0.62
 Identities = 16/25 (64%), Positives = 18/25 (72%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            +DP GLKGG N Y Y LNPI  +DP
Sbjct: 1365 RDPIGLKGGINIYGYALNPIVWMDP 1389


>UniRef50_Q7MZK7 Cluster: Similar to the N-terminal region of RhsC
           protein; n=2; Enterobacteriaceae|Rep: Similar to the
           N-terminal region of RhsC protein - Photorhabdus
           luminescens subsp. laumondii
          Length = 174

 Score = 36.3 bits (80), Expect = 1.1
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = -2

Query: 862 DPDGLKGGWNFYXYPLNPISNIDP 791
           DP GLKGG N Y Y  NP++ IDP
Sbjct: 22  DPIGLKGGLNLYQYAPNPVTWIDP 45


>UniRef50_Q00WM6 Cluster: Ubiquitin-protein ligase 2; n=1;
            Ostreococcus tauri|Rep: Ubiquitin-protein ligase 2 -
            Ostreococcus tauri
          Length = 2639

 Score = 35.9 bits (79), Expect = 1.4
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = +1

Query: 649  IVPFTIWGHKDIDDRNGISPHISGTAFFHQFRPIECS---GLMHFSV 780
            + PF  W H+DID   G+SP    T     F+P +C    G+ H  +
Sbjct: 2522 VAPFEGWMHQDIDRIGGVSPSSQQTGRASDFKPFKCQIELGVSHIRI 2568


>UniRef50_Q8U3F9 Cluster: Integral membrane glycosyltransferase;
           n=2; Pyrococcus|Rep: Integral membrane
           glycosyltransferase - Pyrococcus furiosus
          Length = 700

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
 Frame = -2

Query: 316 IYYFFIQSYM----AGFIAFNTILFMHRLSLLDSTRDVSELISLMSYGMMVICFPTGIVF 149
           +YY+F+Q  +      ++ F   L++ +LS+ +   D+  L+ L S G+MV+  P   + 
Sbjct: 221 LYYYFVQYALLPAFTNYMLFLFALYILQLSIRERKPDIILLLGLTS-GVMVVTHPYQYML 279

Query: 148 FIALIFIGTVS 116
           F A+ F  T+S
Sbjct: 280 FQAVAFFTTIS 290


>UniRef50_Q395C2 Cluster: Rhs family protein; n=1; Burkholderia sp.
           383|Rep: Rhs family protein - Burkholderia sp. (strain
           383) (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086
           / R18194))
          Length = 190

 Score = 35.1 bits (77), Expect = 2.5
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNIDP 791
           QDP GLKGG N Y Y  NP++  DP
Sbjct: 44  QDPIGLKGGANSYVYAHNPVTLSDP 68


>UniRef50_Q4ZLF3 Cluster: YD repeat; n=3; Pseudomonas syringae pv.
           syringae B728a|Rep: YD repeat - Pseudomonas syringae pv.
           syringae (strain B728a)
          Length = 451

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 15/25 (60%), Positives = 17/25 (68%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNIDP 791
           QDP GL GG+N Y Y  NP + IDP
Sbjct: 286 QDPIGLLGGFNLYGYCRNPTAWIDP 310


>UniRef50_Q58715 Cluster: Uncharacterized sodium-dependent
           transporter MJ1319; n=6; Euryarchaeota|Rep:
           Uncharacterized sodium-dependent transporter MJ1319 -
           Methanococcus jannaschii
          Length = 492

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
 Frame = -2

Query: 295 SYMAGFIAFNTILFMHRLSLLDSTRDVSELISL--MSYGMMVICFP-----TGIVFFIAL 137
           S++AGF  F T+ +M   S +   + VSE I L  +++   +   P      GIVFF+AL
Sbjct: 269 SFLAGFAVFGTLGYMSYTSGIPLDKAVSEGIGLAFVTFPKALSLLPFASRLFGIVFFLAL 328

Query: 136 IFIGTVSDI 110
           +F G  S +
Sbjct: 329 VFAGISSAV 337


>UniRef50_Q7MZK5 Cluster: Similar to Rhs-family protein; n=2;
            Gammaproteobacteria|Rep: Similar to Rhs-family protein -
            Photorhabdus luminescens subsp. laumondii
          Length = 1424

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP GL GG N Y Y  NP+S IDP
Sbjct: 1272 DPIGLAGGLNLYTYAPNPMSWIDP 1295


>UniRef50_Q6LUC6 Cluster: Hypothetical nucleotidyltransferase; n=1;
            Photobacterium profundum|Rep: Hypothetical
            nucleotidyltransferase - Photobacterium profundum
            (Photobacterium sp. (strain SS9))
          Length = 1352

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            QDP GL GG N Y Y  NPI  +DP
Sbjct: 1132 QDPIGLLGGINHYRYAPNPIQWVDP 1156


>UniRef50_Q6LUC4 Cluster: Putative uncharacterized protein; n=1;
           Photobacterium profundum|Rep: Putative uncharacterized
           protein - Photobacterium profundum (Photobacterium sp.
           (strain SS9))
          Length = 532

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNIDP 791
           QDP GL GG N Y Y  NPI  +DP
Sbjct: 334 QDPIGLLGGINHYRYAPNPIQWVDP 358


>UniRef50_Q6CZ75 Cluster: Rhs-family protein; n=3; Pectobacterium
            atrosepticum|Rep: Rhs-family protein - Erwinia carotovora
            subsp. atroseptica (Pectobacterium atrosepticum)
          Length = 1427

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP G++GG N Y Y  NP++ IDP
Sbjct: 1271 DPIGIRGGLNLYAYVKNPVNWIDP 1294


>UniRef50_A6GLW0 Cluster: Rhs family protein; n=1; Limnobacter sp.
            MED105|Rep: Rhs family protein - Limnobacter sp. MED105
          Length = 1598

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 16/34 (47%), Positives = 19/34 (55%)
 Frame = -2

Query: 892  PRCRAVIPLQDPDGLKGGWNFYXYPLNPISNIDP 791
            P C      QDP GL GG N Y Y  NP++ +DP
Sbjct: 1425 PNC-GQFTTQDPIGLLGGMNTYQYAPNPMTWVDP 1457


>UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147;
          n=1; Monodelphis domestica|Rep: PREDICTED: similar to
          Ac1147 - Monodelphis domestica
          Length = 510

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 17/28 (60%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 81 TRATLKESACS-PWPRGPGNPLKLLRAG 1
          TRATL  SAC+ P P G GNPL  +R G
Sbjct: 9  TRATLTGSACAYPTPAGAGNPLNPIRDG 36


>UniRef50_Q74QM5 Cluster: Rhs family protein; n=7; Yersinia|Rep: Rhs
            family protein - Yersinia pestis
          Length = 1438

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 16/34 (47%), Positives = 20/34 (58%)
 Frame = -2

Query: 892  PRCRAVIPLQDPDGLKGGWNFYXYPLNPISNIDP 791
            P C   I  QDP GLKGG N Y + +N +  +DP
Sbjct: 1337 PACGVFIS-QDPIGLKGGLNPYQFAVNTLGWVDP 1369


>UniRef50_Q4K3M9 Cluster: Rhs family protein; n=2; Pseudomonas
            fluorescens group|Rep: Rhs family protein - Pseudomonas
            fluorescens (strain Pf-5 / ATCC BAA-477)
          Length = 1486

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 15/24 (62%), Positives = 15/24 (62%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP GL GG N Y Y  NPI  IDP
Sbjct: 1324 DPIGLAGGLNLYQYAPNPIGWIDP 1347


>UniRef50_Q2SFR5 Cluster: Rhs family protein; n=2; Hahella
           chejuensis KCTC 2396|Rep: Rhs family protein - Hahella
           chejuensis (strain KCTC 2396)
          Length = 471

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = -2

Query: 865 QDPDGLKGGWNFYXYPLNPISNIDP 791
           QDP GL GG N Y Y LNP   +DP
Sbjct: 108 QDPVGLLGGDNNYQYALNPTGWVDP 132


>UniRef50_Q13ML3 Cluster: YD repeat protein; n=1; Burkholderia
            xenovorans LB400|Rep: YD repeat protein - Burkholderia
            xenovorans (strain LB400)
          Length = 1531

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 15/24 (62%), Positives = 16/24 (66%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP GL GG N Y Y  NP+S IDP
Sbjct: 1378 DPIGLAGGVNLYRYAPNPMSWIDP 1401


>UniRef50_A7K3Q8 Cluster: Rhs family protein; n=5; Vibrio|Rep: Rhs
            family protein - Vibrio sp. Ex25
          Length = 1384

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            QDP  + GG N Y Y +NPI  IDP
Sbjct: 1104 QDPISIAGGINHYQYAINPIQWIDP 1128


>UniRef50_A2QYX4 Cluster: Contig An12c0080, complete genome; n=1;
            Aspergillus niger|Rep: Contig An12c0080, complete genome
            - Aspergillus niger
          Length = 5054

 Score = 33.9 bits (74), Expect = 5.8
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 241  SLLDSTRDVSELISLMSYGMMVICFPTGIVFFIALIFIGTVSDII 107
            +LL   +DV+EL  + +Y +M++C P G+   +  +F   V D +
Sbjct: 2366 TLLSGLQDVAELKGVDTYPLMLVCEPDGVSLHLTAVFDPAVLDAV 2410


>UniRef50_UPI000023DD5E Cluster: hypothetical protein FG03877.1; n=1;
            Gibberella zeae PH-1|Rep: hypothetical protein FG03877.1
            - Gibberella zeae PH-1
          Length = 1127

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 18/53 (33%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +1

Query: 307  NNIFHYITPVNTNLIKRPMLFPEHFILHVSKESLDQSWQFL-NSPKFIGVNIS 462
            +NI H ++P   N   + +  P H+ +H S E++DQS + + NSP F G +++
Sbjct: 855  HNISHSLSPTLHNAGFQELGLPHHYQIHES-ENVDQSVELIINSPDFGGASVT 906


>UniRef50_Q2SPP2 Cluster: Rhs family protein; n=3; Hahella chejuensis
            KCTC 2396|Rep: Rhs family protein - Hahella chejuensis
            (strain KCTC 2396)
          Length = 1434

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            QDP GL GG N Y Y  NP+  +DP
Sbjct: 1187 QDPIGLLGGANAYQYAPNPVGWVDP 1211


>UniRef50_Q8D1M9 Cluster: Rhs-like core protein; n=10;
            Enterobacteriaceae|Rep: Rhs-like core protein - Yersinia
            pestis
          Length = 1514

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP GL+GG N Y Y  NP+S +DP
Sbjct: 1353 DPIGLEGGLNPYGYVHNPVSWVDP 1376


>UniRef50_A7MQ44 Cluster: Putative uncharacterized protein; n=2;
            Enterobacter sakazakii ATCC BAA-894|Rep: Putative
            uncharacterized protein - Enterobacter sakazakii ATCC
            BAA-894
          Length = 1339

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            QDP GL GG N Y Y  NP+  +DP
Sbjct: 1185 QDPIGLAGGINLYQYAPNPLVWVDP 1209


>UniRef50_A1TQS0 Cluster: YD repeat protein; n=1; Acidovorax avenae
            subsp. citrulli AAC00-1|Rep: YD repeat protein -
            Acidovorax avenae subsp. citrulli (strain AAC00-1)
          Length = 1602

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = -2

Query: 865  QDPDGLKGGWNFYXYPLNPISNIDP 791
            +DP G  GG N + YPL+P S IDP
Sbjct: 1438 EDPIGFLGGINTFIYPLDPYSWIDP 1462


>UniRef50_A1TJG7 Cluster: YD repeat protein; n=3; Acidovorax avenae
            subsp. citrulli AAC00-1|Rep: YD repeat protein -
            Acidovorax avenae subsp. citrulli (strain AAC00-1)
          Length = 1604

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP GL GG N + Y  NP+S IDP
Sbjct: 1462 DPIGLAGGLNLHGYAANPLSWIDP 1485


>UniRef50_A1FBV2 Cluster: RHS protein; n=30; Pseudomonas|Rep: RHS
            protein - Pseudomonas putida W619
          Length = 1411

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -2

Query: 862  DPDGLKGGWNFYXYPLNPISNIDP 791
            DP GL+GG N + Y +NPI  IDP
Sbjct: 1250 DPIGLRGGVNLFRYNVNPIYWIDP 1273


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 995,104,997
Number of Sequences: 1657284
Number of extensions: 22560492
Number of successful extensions: 55379
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 52847
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55369
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 83621356644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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