Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0691.Seq
         (914 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    31   0.037
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.4  
Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.           25   3.2  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    25   4.2  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    25   4.2  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    25   4.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   7.4  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   9.8  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 31.5 bits (68), Expect = 0.037
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
 Frame = +1

Query: 370 PEHFILHVSKESLDQ-----SWQFLNSPKFIGVNISGNTE*RGLTSLNFPFNSSPHNYYR 534
           P    + +S+ES+D      S  F   P   G +IS +    GLT+ + P     H   +
Sbjct: 642 PSTSSVELSEESMDSDGGGASGDFHCLPSATGRDISPSASAAGLTTRSPPIEL--HELQQ 699

Query: 535 FQRGHNGPAASFVSLLALPGPHRP 606
            Q+ + GP A+ + +++  GPH P
Sbjct: 700 QQQQNGGPTAT-IMMISTAGPHHP 722


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 310 NIFHYITPVNTNLIKRPMLFPEHFI 384
           N+FH+I  V +     PM+  +H+I
Sbjct: 146 NVFHHIKQVRSQKPLLPMILDQHYI 170


>Z18889-1|CAA79327.1|  274|Anopheles gambiae trypsin protein.
          Length = 274

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +2

Query: 5   ARRSFSGLPGPLGQGEHADSFSVARV 82
           A RS S L  PLG   HA   +V RV
Sbjct: 91  AGRSTSSLTVPLGTSRHASGGTVVRV 116


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 336 HRSDVMKYIIFLFRAIWLALS 274
           HRSD++  ++FL++ I + +S
Sbjct: 141 HRSDIVYGVLFLYQTIGIVMS 161


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 336 HRSDVMKYIIFLFRAIWLALS 274
           HRSD++  ++FL++ I + +S
Sbjct: 141 HRSDIVYGVLFLYQTIGIVMS 161


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -3

Query: 336 HRSDVMKYIIFLFRAIWLALS 274
           HRSD++  ++FL++ I + +S
Sbjct: 141 HRSDIVYGVLFLYQTIGIVMS 161


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -3

Query: 378 VLRK*HWTFY*ICIHRSDVMKYIIFLFRAIWL 283
           V+RK       +C  ++D+ K++  L R +WL
Sbjct: 361 VIRKSFHALRQLCASQADIPKWLGLLERTLWL 392


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 898 IMPRCRAVIPLQDPDGL 848
           I+  C+AV   QDPDGL
Sbjct: 63  IVIECQAVPSSQDPDGL 79


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,039,480
Number of Sequences: 2352
Number of extensions: 23500
Number of successful extensions: 56
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)