BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0691.Seq
(914 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051496-1|AAK92920.1| 217|Drosophila melanogaster GH14950p pro... 31 2.2
AF274019-1|AAF90145.1| 217|Drosophila melanogaster tetraspanin ... 31 2.2
AE014134-2395|AAF53329.3| 1544|Drosophila melanogaster CG31731-P... 31 2.2
AE014134-2394|ABI31314.1| 1597|Drosophila melanogaster CG31731-P... 31 2.2
AE013599-292|AAF59303.2| 217|Drosophila melanogaster CG12840-PA... 31 2.2
BT001480-1|AAN71235.1| 339|Drosophila melanogaster LD21829p pro... 29 8.9
AE014297-78|AAF52132.1| 339|Drosophila melanogaster CG9853-PA p... 29 8.9
>AY051496-1|AAK92920.1| 217|Drosophila melanogaster GH14950p
protein.
Length = 217
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 321 MKYIIFLFRAIWLALSLLILFF 256
+KY +FLF A+W L +L+L F
Sbjct: 8 IKYSLFLFNALWAILGILVLIF 29
>AF274019-1|AAF90145.1| 217|Drosophila melanogaster tetraspanin
42El protein.
Length = 217
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 321 MKYIIFLFRAIWLALSLLILFF 256
+KY +FLF A+W L +L+L F
Sbjct: 8 IKYSLFLFNALWAILGILVLIF 29
>AE014134-2395|AAF53329.3| 1544|Drosophila melanogaster CG31731-PA,
isoform A protein.
Length = 1544
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 322 NEIYYFFIQSYMAGFIAFNTILFMHRLSLLDSTRDVSELISLMSYGMMVICFPTG 158
NE Y I + F IL MH +SL+++ + +S M G++ + PTG
Sbjct: 767 NEWLYTLIMLCIPFVCVFGAILVMHAMSLVENEEALPLKLSQMGSGVIYVHNPTG 821
>AE014134-2394|ABI31314.1| 1597|Drosophila melanogaster CG31731-PB,
isoform B protein.
Length = 1597
Score = 31.1 bits (67), Expect = 2.2
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -2
Query: 322 NEIYYFFIQSYMAGFIAFNTILFMHRLSLLDSTRDVSELISLMSYGMMVICFPTG 158
NE Y I + F IL MH +SL+++ + +S M G++ + PTG
Sbjct: 820 NEWLYTLIMLCIPFVCVFGAILVMHAMSLVENEEALPLKLSQMGSGVIYVHNPTG 874
>AE013599-292|AAF59303.2| 217|Drosophila melanogaster CG12840-PA
protein.
Length = 217
Score = 31.1 bits (67), Expect = 2.2
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -3
Query: 321 MKYIIFLFRAIWLALSLLILFF 256
+KY +FLF A+W L +L+L F
Sbjct: 8 IKYSLFLFNALWAILGILVLIF 29
>BT001480-1|AAN71235.1| 339|Drosophila melanogaster LD21829p
protein.
Length = 339
Score = 29.1 bits (62), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 200 SHVLWNDGNMFSNRHSILYCSN 135
+HV W +GN+ S RH L C +
Sbjct: 153 AHVFWTEGNIESARHHYLLCQD 174
>AE014297-78|AAF52132.1| 339|Drosophila melanogaster CG9853-PA
protein.
Length = 339
Score = 29.1 bits (62), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1
Query: 200 SHVLWNDGNMFSNRHSILYCSN 135
+HV W +GN+ S RH L C +
Sbjct: 153 AHVFWTEGNIESARHHYLLCQD 174
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,019,250
Number of Sequences: 53049
Number of extensions: 1027608
Number of successful extensions: 2316
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2316
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -