Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0688.Seq
         (753 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   1.9  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   1.9  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   3.3  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   5.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   5.8  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   5.8  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/64 (29%), Positives = 29/64 (45%)
 Frame = +1

Query: 133 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID*NNGISAGLYSCSLAATKEILVSF 312
           G  P      ++ R W GV+   KR  P   S ++D       GL + +LAAT  +  + 
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD-------GLNTEALAATIFMYFAA 458

Query: 313 FSSA 324
            S+A
Sbjct: 459 LSTA 462


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 207 EPPEHHISRYRLKQRDQCWA 266
           EPP+HH SR     R +C A
Sbjct: 833 EPPKHHASRGAKPHRSRCEA 852


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +1

Query: 109 SPRPSVATGLAPSTGKRPRSRRTWTGVVATRKRNLP 216
           +P  S++ G++      P +   WTG V  RK+  P
Sbjct: 241 NPGSSLSVGVSGVGSCTPSNPLEWTGNVTVRKKRKP 276


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 118 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 240
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 118 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 240
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 195 PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +1

Query: 118 PSVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 240
           P     + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 81  PYAQPPVGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,177
Number of Sequences: 2352
Number of extensions: 11696
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)