Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0688.Seq
(753 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY333288-1|AAR03493.1| 569|Homo sapiens M6-kinase 3 protein. 31 4.5
Z99757-1|CAB75612.1| 520|Homo sapiens c394H11.1 (similar to SOX... 30 7.8
BC031797-1|AAH31797.1| 446|Homo sapiens SRY (sex determining re... 30 7.8
AF226675-1|AAF35886.1| 446|Homo sapiens transcription factor SO... 30 7.8
AF164104-1|AAF37424.1| 328|Homo sapiens transcription factor SO... 30 7.8
AE006465-6|AAK61260.1| 446|Homo sapiens SRY (sex determining re... 30 7.8
>AY333288-1|AAR03493.1| 569|Homo sapiens M6-kinase 3 protein.
Length = 569
Score = 31.1 bits (67), Expect = 4.5
Identities = 23/82 (28%), Positives = 36/82 (43%)
Frame = +3
Query: 3 ERERELVSRSYLALDGVYHPLRAALSSNPTLRSVPLAATLRRYGPGTLYGKTAPFKTNLD 182
E +R+L+ + + L Y L LS TL S+ L G YG + NL+
Sbjct: 214 ENQRDLIGKDVVCL---YQTLDNPLSKLTTLNSMHSHFILSDDGTVGKYGNEMKLRRNLE 270
Query: 183 RSRRDEKAEPPEHHISRYRLKQ 248
+ +K P I+ YRL++
Sbjct: 271 KYLSLQKIHCPGEEITVYRLEE 292
>Z99757-1|CAB75612.1| 520|Homo sapiens c394H11.1 (similar to SOX
(SRY (sex determining region Y))) protein.
Length = 520
Score = 30.3 bits (65), Expect = 7.8
Identities = 30/130 (23%), Positives = 47/130 (36%)
Frame = +3
Query: 87 PTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDQCWA 266
P L + L+ TL + + PF +R R K + P++ R K +
Sbjct: 199 PHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHS 258
Query: 267 IFLFARRY*GNPG*FLFLRLLICLNSGHSYCDVRGEILGSSQDXTSAKAFAKGVFINQER 446
+PG + L GH + D G+ G T+ K + E
Sbjct: 259 DSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPEL 318
Query: 447 KLEVRRRLDT 476
KLE RR +D+
Sbjct: 319 KLEGRRPVDS 328
>BC031797-1|AAH31797.1| 446|Homo sapiens SRY (sex determining
region Y)-box 8 protein.
Length = 446
Score = 30.3 bits (65), Expect = 7.8
Identities = 30/130 (23%), Positives = 47/130 (36%)
Frame = +3
Query: 87 PTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDQCWA 266
P L + L+ TL + + PF +R R K + P++ R K +
Sbjct: 125 PHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHS 184
Query: 267 IFLFARRY*GNPG*FLFLRLLICLNSGHSYCDVRGEILGSSQDXTSAKAFAKGVFINQER 446
+PG + L GH + D G+ G T+ K + E
Sbjct: 185 DSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPEL 244
Query: 447 KLEVRRRLDT 476
KLE RR +D+
Sbjct: 245 KLEGRRPVDS 254
>AF226675-1|AAF35886.1| 446|Homo sapiens transcription factor SOX8
protein.
Length = 446
Score = 30.3 bits (65), Expect = 7.8
Identities = 30/130 (23%), Positives = 47/130 (36%)
Frame = +3
Query: 87 PTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDQCWA 266
P L + L+ TL + + PF +R R K + P++ R K +
Sbjct: 125 PHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHS 184
Query: 267 IFLFARRY*GNPG*FLFLRLLICLNSGHSYCDVRGEILGSSQDXTSAKAFAKGVFINQER 446
+PG + L GH + D G+ G T+ K + E
Sbjct: 185 DSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPEL 244
Query: 447 KLEVRRRLDT 476
KLE RR +D+
Sbjct: 245 KLEGRRPVDS 254
>AF164104-1|AAF37424.1| 328|Homo sapiens transcription factor SOX8
protein.
Length = 328
Score = 30.3 bits (65), Expect = 7.8
Identities = 30/130 (23%), Positives = 47/130 (36%)
Frame = +3
Query: 87 PTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDQCWA 266
P L + L+ TL + + PF +R R K + P++ R K +
Sbjct: 7 PHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHS 66
Query: 267 IFLFARRY*GNPG*FLFLRLLICLNSGHSYCDVRGEILGSSQDXTSAKAFAKGVFINQER 446
+PG + L GH + D G+ G T+ K + E
Sbjct: 67 DSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPEL 126
Query: 447 KLEVRRRLDT 476
KLE RR +D+
Sbjct: 127 KLEGRRPVDS 136
>AE006465-6|AAK61260.1| 446|Homo sapiens SRY (sex determining
region Y)-box 8 protein.
Length = 446
Score = 30.3 bits (65), Expect = 7.8
Identities = 30/130 (23%), Positives = 47/130 (36%)
Frame = +3
Query: 87 PTLRSVPLAATLRRYGPGTLYGKTAPFKTNLDRSRRDEKAEPPEHHISRYRLKQRDQCWA 266
P L + L+ TL + + PF +R R K + P++ R K +
Sbjct: 125 PHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSAKAGHS 184
Query: 267 IFLFARRY*GNPG*FLFLRLLICLNSGHSYCDVRGEILGSSQDXTSAKAFAKGVFINQER 446
+PG + L GH + D G+ G T+ K + E
Sbjct: 185 DSDSGAELGPHPGGGAVYKAEAGLGDGHHHGDHTGQTHGPPTPPTTPKTELQQAGAKPEL 244
Query: 447 KLEVRRRLDT 476
KLE RR +D+
Sbjct: 245 KLEGRRPVDS 254
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,127,834
Number of Sequences: 237096
Number of extensions: 1987375
Number of successful extensions: 4011
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4011
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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