Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0687.Seq
(911 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0548 + 4099386-4099847,4100435-4101316 147 1e-35
03_01_0547 + 4093196-4093657,4094267-4095148 147 1e-35
03_01_0544 + 4082528-4082989,4083585-4084466 147 1e-35
03_01_0543 + 4076981-4077442,4078145-4079026 147 1e-35
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 56 5e-08
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 51 1e-06
04_03_0107 + 11328267-11328276,11329059-11329170,11329862-113299... 50 3e-06
02_04_0462 + 23131433-23132836 49 6e-06
02_03_0105 - 15254959-15255216,15256235-15256299,15257080-152572... 47 2e-05
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 44 1e-04
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 44 1e-04
11_06_0516 + 24502645-24504507 29 5.1
10_01_0291 + 3010685-3010838,3010954-3011489 29 6.8
10_01_0290 + 2999775-2999928,3000281-3000816 29 6.8
10_01_0204 + 2199778-2200835,2201212-2201311 29 6.8
07_03_1026 - 23369298-23370326 29 6.8
06_03_1165 - 28106604-28106915 28 9.0
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 147 bits (356), Expect = 1e-35
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = -3
Query: 252 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 73
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAAS 327
Query: 72 FTAQVIVLNHPGQISNGYTPVLDC 1
FT+QVI++NHPGQI NGY PVLDC
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 125 bits (302), Expect = 4e-29
Identities = 67/110 (60%), Positives = 75/110 (68%)
Frame = -1
Query: 584 EIKKEVSSYIKKNWLQPSCCRFRAHSGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 405
EI KEVSSY+KK P F SG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 404 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 255
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 266
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 147 bits (356), Expect = 1e-35
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = -3
Query: 252 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 73
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAAS 327
Query: 72 FTAQVIVLNHPGQISNGYTPVLDC 1
FT+QVI++NHPGQI NGY PVLDC
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 125 bits (302), Expect = 4e-29
Identities = 67/110 (60%), Positives = 75/110 (68%)
Frame = -1
Query: 584 EIKKEVSSYIKKNWLQPSCCRFRAHSGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 405
EI KEVSSY+KK P F SG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 404 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 255
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 266
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 147 bits (356), Expect = 1e-35
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = -3
Query: 252 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 73
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAAS 327
Query: 72 FTAQVIVLNHPGQISNGYTPVLDC 1
FT+QVI++NHPGQI NGY PVLDC
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 125 bits (302), Expect = 4e-29
Identities = 67/110 (60%), Positives = 75/110 (68%)
Frame = -1
Query: 584 EIKKEVSSYIKKNWLQPSCCRFRAHSGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 405
EI KEVSSY+KK P F SG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 404 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 255
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 266
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 147 bits (356), Expect = 1e-35
Identities = 64/84 (76%), Positives = 76/84 (90%)
Frame = -3
Query: 252 FAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAAD 73
F P+ +TTEVKSVEMHHEALQEA+PGDNVGFNVKNV+VK+L+RGYVA +SK++P K AA
Sbjct: 268 FGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKEAAS 327
Query: 72 FTAQVIVLNHPGQISNGYTPVLDC 1
FT+QVI++NHPGQI NGY PVLDC
Sbjct: 328 FTSQVIIMNHPGQIGNGYAPVLDC 351
Score = 125 bits (302), Expect = 4e-29
Identities = 67/110 (60%), Positives = 75/110 (68%)
Frame = -1
Query: 584 EIKKEVSSYIKKNWLQPSCCRFRAHSGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCL 405
EI KEVSSY+KK P F SG+ GDNM+E ST + W+KG L
Sbjct: 169 EIVKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYKG------------PTL 216
Query: 404 IEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 255
+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG +V
Sbjct: 217 LEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVV 266
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 55.6 bits (128), Expect = 5e-08
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = -1
Query: 419 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGT 261
DG CL++A+D + PP+R KPLRLP+ DV+ +G V + G+VE G + G+
Sbjct: 442 DGNCLLKAIDTLPPPSRDVSKPLRLPICDVFSSHKLGQVAIGGKVEVGATRSGS 495
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 50.8 bits (116), Expect = 1e-06
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Frame = -1
Query: 479 PSTKMPWFKGWQVERKEGKAD--GKC----LIEALDAILP-PARPTDKPLRLPLQDVYKI 321
P ++P +G + +G D GK L++A+D +P P R DK +P++DV+ I
Sbjct: 219 PGDEIPIIRGSALSALQGTNDEIGKNAILKLMDAVDEYIPDPVRQLDKSFLMPIEDVFSI 278
Query: 320 GGIGTVPVGRVETGVLKPG 264
G GTV GRVE G +K G
Sbjct: 279 QGRGTVVTGRVEQGTIKTG 297
Score = 31.9 bits (69), Expect = 0.73
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -3
Query: 237 ITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQV 58
+ T V VEM + L GDNVG ++ + +++RG V K K F A++
Sbjct: 311 LKTTVTGVEMFKKILDHGEAGDNVGLLLRGLKRGDVQRGQVV--CKPGTVKTYQKFEAEI 368
Query: 57 IVL 49
VL
Sbjct: 369 YVL 371
>04_03_0107 +
11328267-11328276,11329059-11329170,11329862-11329907,
11330185-11330256,11332292-11332303,11332880-11332942,
11333038-11333192,11333303-11333367,11334645-11334795,
11335230-11335335,11335440-11335575,11336310-11336374,
11337003-11337188,11337298-11337399
Length = 426
Score = 50.0 bits (114), Expect = 3e-06
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = -1
Query: 419 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 264
DG CL E LD I P R P+R+P+ D YK +GTV +G++E+G ++ G
Sbjct: 206 DGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTIREG 255
Score = 30.3 bits (65), Expect = 2.2
Identities = 15/66 (22%), Positives = 30/66 (45%)
Frame = -3
Query: 246 PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 67
P +V + + ++ A P +NV + + +++ G+V S NP +F
Sbjct: 262 PNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVL-SSIGNPVGAVTEFN 320
Query: 66 AQVIVL 49
AQ+ +L
Sbjct: 321 AQLQIL 326
>02_04_0462 + 23131433-23132836
Length = 467
Score = 48.8 bits (111), Expect = 6e-06
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Frame = -1
Query: 407 LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 255
LI+++D +P P R TD P L ++DV+ I G GTV GR+E G +K G V
Sbjct: 260 LIDSVDNYIPVPQRQTDLPFLLAVEDVFSITGRGTVATGRIERGTVKVGDTV 311
Score = 35.1 bits (77), Expect = 0.078
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = -3
Query: 225 VKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLN 46
V VEM + + +A+ GDNVG ++ + ++ RG V + P D V+ +
Sbjct: 324 VTGVEMFQKTMDDAMAGDNVGLLLRGMQKDDIERGMVLAKPASITPHTKFDAVVYVLKKD 383
Query: 45 HPGQIS---NGYTP 13
G+ S GY P
Sbjct: 384 EGGRHSPFFPGYRP 397
>02_03_0105 -
15254959-15255216,15256235-15256299,15257080-15257215,
15257314-15257419,15257642-15257792,15258817-15258881,
15258980-15259134,15259219-15259281,15259846-15259917,
15260364-15260408
Length = 371
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -1
Query: 416 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 264
G CL E LD I P R P+R+P+ D YK +GTV +G++E+G + G
Sbjct: 162 GPCLFEVLDCIQVPLRDPKGPVRMPIIDKYK--DMGTVVMGKIESGTISEG 210
Score = 36.3 bits (80), Expect = 0.034
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = -3
Query: 246 PANITTEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFT 67
P +V SV + ++ A PG+NV + + ++ G+V K NP ++F
Sbjct: 217 PNKANVKVISVHCDEDRVRSAAPGENVRVKLSGIEEDDITAGFVLSSIK-NPVSAISEFR 275
Query: 66 AQVIVL 49
AQ+ +L
Sbjct: 276 AQLQIL 281
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -1
Query: 416 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIV 255
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKV 513
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Frame = -1
Query: 416 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGT-VPVGRVETGVLKPGTIV 255
G CL++A+D++ P+R KPL LP+ DV K G G++ETG ++ G+ V
Sbjct: 459 GFCLLDAIDSLQLPSRDVSKPLILPICDVIKSQSTGQFAAFGKLETGAIRIGSKV 513
>11_06_0516 + 24502645-24504507
Length = 620
Score = 29.1 bits (62), Expect = 5.1
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 216 VEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPG 37
VE HEAL AV D V S++E+ R GD + PP + V++ G
Sbjct: 114 VEQVHEALL-AVDAD---IEVIKASIREVYRFPCDGDERRGPPPPSTAPATGVVMTRRMG 169
Query: 36 QISNG 22
+I G
Sbjct: 170 EIRRG 174
>10_01_0291 + 3010685-3010838,3010954-3011489
Length = 229
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 337 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 510
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFIAVAGQTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0290 + 2999775-2999928,3000281-3000816
Length = 229
Score = 28.7 bits (61), Expect = 6.8
Identities = 16/58 (27%), Positives = 25/58 (43%)
Frame = +1
Query: 337 CRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHPLNQGILVEGSNMLSPCHPE 510
C G+ V + G + A H+PSAL + + C P+ + I+ P PE
Sbjct: 105 CPGQEPSKIVPMSEGTFVAIAGKTHYPSALCASATICGPIKKKIIDHFHKKPVPPKPE 162
>10_01_0204 + 2199778-2200835,2201212-2201311
Length = 385
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 283 VSTLPTGTVP-IPPILYTSCRGRRRGLSVGRAGGRMASRASMRHFPSALPSLRSTCHP 453
+S +P +V + + S R RRR ++ RAG R+ SRA +R PS S+ HP
Sbjct: 202 ISFVPCPSVSSVRSAIVFSARRRRRQSAIARAGARV-SRAGVR--PSPASSILVGVHP 256
>07_03_1026 - 23369298-23370326
Length = 342
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = -1
Query: 518 RAHSGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLP 342
RAH+ GD+ P + + K+G++ G+C + + P P+ P P
Sbjct: 227 RAHAAVRGDDATPPRAIKKCKSDERRQEKDGESAGQCATTSSPRVQPSPTPSPAPAARP 285
>06_03_1165 - 28106604-28106915
Length = 103
Score = 28.3 bits (60), Expect = 9.0
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = -2
Query: 226 SQVCGDAPRSSPRSCTWRQCRFQRKERVRQGIASWLCCW 110
SQ G A SSP + R R +R E + A L CW
Sbjct: 62 SQTGGAAASSSPAAACGRAARSKRSEEEKMQKAYHLVCW 100
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,691,007
Number of Sequences: 37544
Number of extensions: 626816
Number of successful extensions: 1970
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1959
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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