Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0687.Seq
         (911 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          25   2.4  
EF519472-1|ABP73553.1|  165|Anopheles gambiae CTLMA2 protein.          25   3.2  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     25   4.2  
EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.          25   4.2  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   4.2  
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    25   4.2  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   7.4  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    24   7.4  

>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
 Frame = -3

Query: 702 NXRVFPVTTLLKRRPVNC*YDSLXGELATGPPPRRLVLSGNQEGSI---LIHQEELATTQ 532
           N   + +  L    PVN  Y++L     T P P ++     Q+  +    +HQ+     Q
Sbjct: 171 NSVTYTLDDLSNTVPVNTQYNALNDNYVTSPQPSQVTSRQLQQQQLQPNQLHQQLQQQQQ 230

Query: 531 LLSLSCPFWM 502
              LS P +M
Sbjct: 231 QQQLSSPCYM 240


>EF519472-1|ABP73553.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 358 SPCVFPCKTYTKSVVLVP 305
           +PC+ PCK + + V  +P
Sbjct: 23  NPCLCPCKPFEEKVYFIP 40


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +1

Query: 256 TMVPGFNTPVSTLPTGTVPIPPILYTSCRG 345
           T  PG   P+S L  G V   P  YT+  G
Sbjct: 453 TPSPGIGGPISPLDPGNVTPTPPAYTTLGG 482


>EF519475-1|ABP73559.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 397 LSMPSCHLPAPLTSPCVFPCKTYTKSVVLVP 305
           LS P      P  +PC+ PCK + +    +P
Sbjct: 10  LSGPHTVDDIPQQNPCLCPCKPFEEKEYFIP 40


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
 Frame = -2

Query: 424 KLTENASLKLSMPSCHLPAP--LTSPCVFPCKTYTKSVVLVPCPSAELK 284
           +L   +   L +PSC LP P  +  P   P     KS     C  + L+
Sbjct: 90  ELVTRSLSNLELPSCRLPCPNLIPRPAEVPTTPEHKSAASSSCSLSTLE 138


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = +2

Query: 248 AKKQWYLVSTHQFQLCRRARYQYHRFCIRLAGEDAGACQWGGQVAGWHR 394
           AK    +  T+  +LC    +Q H    RL G   G+    G    +HR
Sbjct: 185 AKSCGLITRTNAERLCSSLLHQAHELRPRLKGGGPGSALLNGSFRVYHR 233


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +1

Query: 415 PSALPSLRSTCHPLN-QGILVEGSNMLSPCHPEWARKRQQ 531
           P+A   + ST  P +   +L+E +NML+  H +   ++QQ
Sbjct: 707 PTATIMMISTAGPHHPHDLLIEENNMLNMTHHQHQHQQQQ 746


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 380 PPARPTDKPLRLP 342
           P +RPT KP RLP
Sbjct: 289 PRSRPTSKPKRLP 301


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 974,962
Number of Sequences: 2352
Number of extensions: 21691
Number of successful extensions: 84
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98814789
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)