Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0686.Seq
         (803 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   3.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   3.3  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    23   4.4  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    23   4.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.4  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              22   5.8  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 297 LWASLKKALMXFG 335
           LW S+KKALM  G
Sbjct: 806 LWTSVKKALMIVG 818


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 297 LWASLKKALMXFG 335
           LW S+KKALM  G
Sbjct: 844 LWTSVKKALMIVG 856


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +1

Query: 451 TYISWWVHCGARPP 492
           +++S+W+H  A PP
Sbjct: 249 SWVSFWLHMDASPP 262


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -3

Query: 339 EIQTPLKPSSARPISTLRKVQXSYSTALNG 250
           E +TP++  S R  S +R     Y T   G
Sbjct: 323 EFKTPMRNDSERNRSPVRPATVQYDTCCQG 352


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 249 HHLMQLNSFXELXVMCLWASLK 314
           H L+Q  +F ++ + C  ASLK
Sbjct: 27  HQLLQTEAFVDVTLACNEASLK 48


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 469 VHCGARPPX*AXKXLCTAS 525
           VHCG RP   + + + TA+
Sbjct: 20  VHCGTRPSFVSDEMIATAA 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,032
Number of Sequences: 438
Number of extensions: 4088
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)