Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0685.Seq
         (911 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   118   5e-29
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   118   5e-29
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   111   7e-27
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    27   0.20 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   5.8  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.8  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    22   7.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  118 bits (285), Expect = 5e-29
 Identities = 52/82 (63%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 182
           LF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPKV
Sbjct: 115 LFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKV 174

Query: 183 QKLLQDFFNGKELNKSINPDEA 248
           Q+L+ ++FNGKE  +SINPDEA
Sbjct: 175 QQLITEYFNGKEPCRSINPDEA 196


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  118 bits (285), Expect = 5e-29
 Identities = 52/82 (63%), Positives = 71/82 (86%)
 Frame = +3

Query: 3   LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 182
           LF+GID+ T+ITRARFE++N D F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPKV
Sbjct: 115 LFDGIDYSTTITRARFEDINMDYFKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKV 174

Query: 183 QKLLQDFFNGKELNKSINPDEA 248
           Q+L+ ++FNGKE  +SINPDEA
Sbjct: 175 QQLITEYFNGKEPCRSINPDEA 196


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  111 bits (267), Expect = 7e-27
 Identities = 52/82 (63%), Positives = 65/82 (79%)
 Frame = +3

Query: 3   LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKV 182
           L    DF  ++TRA+FEELN D F  T++PV+K L DA M K QI +IVLVGGSTRIPK+
Sbjct: 114 LLADYDFSETLTRAKFEELNNDQFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKI 173

Query: 183 QKLLQDFFNGKELNKSINPDEA 248
           Q+L++DFF+GKELN+ INPDEA
Sbjct: 174 QQLIKDFFDGKELNRGINPDEA 195


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = -3

Query: 138 GFEPY-PSWHHGETSPLAPW*T*TDRRSAPRSEHE 37
           GF P+ PS H G   P  PW T  D R   +  H+
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHTFYDYRPWVQHGHQ 502


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 189 LLQDFFNGKELNKSINPDE 245
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = -1

Query: 656 LPEFPGHCTTNTYKTLXTALLPL 588
           L +F G CT N Y  L  A L L
Sbjct: 409 LDDFRGLCTGNKYPILRAAKLGL 431


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.8 bits (44), Expect = 7.6
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 153 PVQYRGFEPYPSWHHGETSPLAP 85
           PV      P+ + HHG T P +P
Sbjct: 17  PVVLDVIPPHYNIHHGATPPQSP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,073
Number of Sequences: 336
Number of extensions: 4157
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25444518
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)