Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0672.Seq
(664 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 31 2.8
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 31 2.8
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 31 2.8
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4504 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4563
Query: 466 GG 461
GG
Sbjct: 4564 GG 4565
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 1542 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 1601
Query: 466 GG 461
GG
Sbjct: 1602 GG 1603
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 31.5 bits (68), Expect = 2.8
Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = -1
Query: 640 TASFKCLPYQLFDGSFCDYPWLSRVXG--ESGFXXRRGSLRXGYHIKEGSRRANYPLPAR 467
T+ F+C+ L P + +V G R S+ G I++ SR N PLPA
Sbjct: 4505 TSEFECVARNLMGSVLVRVPVIVQVHGGFSQWSAWRACSVTCGKGIQKRSRLCNQPLPAN 4564
Query: 466 GG 461
GG
Sbjct: 4565 GG 4566
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,774,847
Number of Sequences: 237096
Number of extensions: 1759274
Number of successful extensions: 2647
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2647
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7478817430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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