Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0672.Seq
         (664 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-P...    30   2.4  
BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    29   4.3  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    29   4.3  
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro...    29   7.5  
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P...    29   7.5  
AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-P...    29   7.5  

>AE014298-3010|AAF50913.2| 4899|Drosophila melanogaster CG11734-PB
            protein.
          Length = 4899

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 231  SANVSVSPGCGXPTARRTNATTSFLTATI 317
            S+N + +PGC  P A   N+TTS  ++T+
Sbjct: 3957 SSNSNANPGCQSPGASMLNSTTSLSSSTV 3985


>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 308 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 409
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +2

Query: 308 RNNFSIRYWSWNYRGCWHQTCP--PIVPR*NI*SVL 409
           R+ FS  +  WNY  CW   C   P+  R N+  +L
Sbjct: 327 RHGFSGLHLDWNYPKCWQSDCSRGPVTDRPNLTKLL 362


>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
          Length = 5233

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 207  NAGSPTICSANVSVSPGCGXPTARRTN 287
            + G+P+  SA+ +V+PG G P  R+TN
Sbjct: 1747 SGGAPST-SASAAVAPGSGTPVTRKTN 1772


>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
            protein.
          Length = 5233

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 207  NAGSPTICSANVSVSPGCGXPTARRTN 287
            + G+P+  SA+ +V+PG G P  R+TN
Sbjct: 1747 SGGAPST-SASAAVAPGSGTPVTRKTN 1772


>AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-PA
           protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = -1

Query: 520 GYHIKEGSRRAN-YPLPARGGSDEK*RYGTLTRPRNRNEYTLNI-LTRNNWRASL 362
           G+H+     RAN YPL   GG+D    +GT+ RP    E ++   +  N+W  +L
Sbjct: 348 GFHV-----RANGYPL---GGTDHNHGHGTIIRPNQTTEISIQFGVQPNSWHYAL 394


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,844,400
Number of Sequences: 53049
Number of extensions: 546136
Number of successful extensions: 1084
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)