Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0668.Seq
         (929 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   1.1  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   4.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.9  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    22   5.9  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    22   5.9  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    22   5.9  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    22   5.9  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    22   5.9  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    22   5.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 62  HPGVTLTFHLEQHHGTEHQRH 124
           HPG+T  +H   H+   H  H
Sbjct: 158 HPGMTFRYHFNVHNSGTHFWH 178


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 539 KAPATHHLRGRSDHIPPSCRRPAPAI 616
           K+P   HLR R D  PP   +  P +
Sbjct: 208 KSPPEKHLRLRRDTAPPQWYQHQPLL 233


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 426 RRAGRHDGCGVLVSLRHFV*STVYSD 349
           R A RHDG  + +S+   V S+VY D
Sbjct: 197 RNAFRHDGLLLTMSVLPNVNSSVYYD 222


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 16  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 57


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 11/42 (26%), Positives = 17/42 (40%)
 Frame = +2

Query: 11  PACGQGTNQQPGRWYQRHPGVTLTFHLEQHHGTEHQRHPCQH 136
           PA G G     G + Q  P    + HL+  +   H    C++
Sbjct: 60  PAPGHGLQPTMGDYTQLQPQRLASTHLQSPNTQTHPSASCKY 101


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 308 RICWAWCLL 282
           R+ W WCL+
Sbjct: 128 RVAWMWCLI 136


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 308 RICWAWCLL 282
           R+ W WCL+
Sbjct: 128 RVAWMWCLI 136


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 308 RICWAWCLL 282
           R+ W WCL+
Sbjct: 128 RVAWMWCLI 136


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -1

Query: 308 RICWAWCLL 282
           R+ W WCL+
Sbjct: 128 RVAWMWCLI 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,547
Number of Sequences: 336
Number of extensions: 4852
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26065116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)