Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0664.Seq
(688 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56C52 Cluster: PREDICTED: similar to CG16940-PA... 116 5e-25
UniRef50_Q4SNY9 Cluster: Chromosome 15 SCAF14542, whole genome s... 102 9e-21
UniRef50_Q8NF60 Cluster: FLJ00327 protein; n=2; Catarrhini|Rep: ... 99 5e-20
UniRef50_Q17L93 Cluster: Ribonuclease; n=2; Culicidae|Rep: Ribon... 95 1e-18
UniRef50_UPI0000E47D53 Cluster: PREDICTED: hypothetical protein,... 94 2e-18
UniRef50_A7S1B6 Cluster: Predicted protein; n=1; Nematostella ve... 94 3e-18
UniRef50_UPI000065FEE8 Cluster: DIS3 mitotic control homolog (S.... 93 4e-18
UniRef50_UPI0000DB782F Cluster: PREDICTED: similar to CG16940-PA... 91 2e-17
UniRef50_Q00X95 Cluster: Exosomal 3'-5' exoribonuclease complex,... 87 4e-16
UniRef50_A7PKV4 Cluster: Chromosome chr7 scaffold_20, whole geno... 84 4e-15
UniRef50_Q5KDY7 Cluster: SSD1 protein, putative; n=2; Filobasidi... 84 4e-15
UniRef50_Q0CT74 Cluster: Mitotic control protein dis3; n=16; Asc... 84 4e-15
UniRef50_Q8IRJ7 Cluster: CG16940-PC, isoform C; n=4; Sophophora|... 82 1e-14
UniRef50_Q09568 Cluster: Uncharacterized ribonuclease F48E8.6; n... 82 1e-14
UniRef50_UPI00015B4E71 Cluster: PREDICTED: similar to ribonuclea... 82 1e-14
UniRef50_Q23DE7 Cluster: RNB-like protein; n=1; Tetrahymena ther... 82 1e-14
UniRef50_Q54XT5 Cluster: Putative uncharacterized protein; n=1; ... 81 2e-14
UniRef50_A7NV97 Cluster: Chromosome chr18 scaffold_1, whole geno... 79 8e-14
UniRef50_Q9SNK4 Cluster: EST AU068209(C12438) corresponds to a r... 78 2e-13
UniRef50_Q4P861 Cluster: Putative uncharacterized protein; n=2; ... 77 3e-13
UniRef50_Q960A7 Cluster: SD10981p; n=13; Coelomata|Rep: SD10981p... 77 5e-13
UniRef50_P37202 Cluster: Mitotic control protein dis3; n=1; Schi... 77 5e-13
UniRef50_UPI000049906F Cluster: exosome complex exonuclease; n=1... 76 7e-13
UniRef50_P24276 Cluster: Protein SSD1; n=6; Saccharomycetales|Re... 76 7e-13
UniRef50_Q4RNE5 Cluster: Chromosome undetermined SCAF15013, whol... 75 1e-12
UniRef50_Q4DG23 Cluster: RRP44p homologue, putative; n=4; Trypan... 75 2e-12
UniRef50_A2FUQ4 Cluster: RNB-like protein; n=1; Trichomonas vagi... 75 2e-12
UniRef50_A6QWR5 Cluster: Putative uncharacterized protein; n=1; ... 75 2e-12
UniRef50_Q7QUJ8 Cluster: GLP_436_41516_39297; n=1; Giardia lambl... 75 2e-12
UniRef50_A0CC06 Cluster: Chromosome undetermined scaffold_166, w... 75 2e-12
UniRef50_Q9Y2L1 Cluster: Exosome complex exonuclease RRP44; n=35... 74 3e-12
UniRef50_Q4Q8N7 Cluster: Rrp44p homologue, putative; n=3; Leishm... 73 5e-12
UniRef50_O13327 Cluster: Protein phosphatase Ssd1 homolog; n=6; ... 73 7e-12
UniRef50_A5E347 Cluster: Protein SSD1; n=1; Lodderomyces elongis... 73 7e-12
UniRef50_Q69Z56 Cluster: MKIAA1955 protein; n=17; Euteleostomi|R... 73 9e-12
UniRef50_Q8WTU9 Cluster: DIS3 mitotic control homolog (S. cerevi... 73 9e-12
UniRef50_A6RWQ8 Cluster: Putative uncharacterized protein; n=1; ... 72 2e-11
UniRef50_A7S7H2 Cluster: Predicted protein; n=2; Nematostella ve... 71 2e-11
UniRef50_UPI0000E4632C Cluster: PREDICTED: similar to mKIAA1955 ... 71 3e-11
UniRef50_Q5BYU7 Cluster: SJCHGC07896 protein; n=1; Schistosoma j... 71 4e-11
UniRef50_Q4UH40 Cluster: Exosome complex exonuclease rrp44, puta... 71 4e-11
UniRef50_Q54BH9 Cluster: Putative uncharacterized protein; n=1; ... 69 8e-11
UniRef50_Q6MYZ1 Cluster: Protein phosphatase ssd1 homologue, put... 69 8e-11
UniRef50_Q6C1S7 Cluster: Yarrowia lipolytica chromosome F of str... 68 2e-10
UniRef50_Q08162 Cluster: Exosome complex exonuclease RRP44; n=12... 68 2e-10
UniRef50_A0BWE7 Cluster: Chromosome undetermined scaffold_131, w... 67 4e-10
UniRef50_Q4T2G1 Cluster: Chromosome undetermined SCAF10273, whol... 66 6e-10
UniRef50_Q00YG1 Cluster: Exosomal 3'-5' exoribonuclease complex,... 66 8e-10
UniRef50_A7AWK8 Cluster: RNB-like domain containing protein; n=1... 66 8e-10
UniRef50_Q55FB1 Cluster: Putative uncharacterized protein; n=1; ... 66 1e-09
UniRef50_A3FQ82 Cluster: Mitotic control protein dis3, putative;... 64 2e-09
UniRef50_UPI00006CBEC4 Cluster: RNB-like protein; n=1; Tetrahyme... 64 3e-09
UniRef50_Q17632 Cluster: Probable exosome complex exonuclease RR... 64 4e-09
UniRef50_O14040 Cluster: Ribonuclease II (RNB) family; n=2; Schi... 63 5e-09
UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmo... 61 3e-08
UniRef50_Q00VG4 Cluster: Exosomal 3'-5' exoribonuclease complex,... 60 5e-08
UniRef50_Q8SW47 Cluster: Similarity to DIS3 PROTEIN; n=1; Enceph... 57 5e-07
UniRef50_Q6MQN7 Cluster: Ribonuclease R; n=1; Bdellovibrio bacte... 56 8e-07
UniRef50_Q4YNU8 Cluster: Mitotic control protein dis3 homologue,... 56 1e-06
UniRef50_Q384J0 Cluster: Exosome complex exonuclease RRP44, puta... 56 1e-06
UniRef50_O32231 Cluster: Ribonuclease R; n=63; Firmicutes|Rep: R... 55 1e-06
UniRef50_Q8IDB6 Cluster: Mitotic control protein dis3 homologue,... 55 2e-06
UniRef50_Q4Q8M6 Cluster: Ribonuclease II-like protein, putative;... 55 2e-06
UniRef50_O67834 Cluster: Ribonuclease R; n=2; Aquifex aeolicus|R... 54 3e-06
UniRef50_A4EAC1 Cluster: Putative uncharacterized protein; n=1; ... 54 4e-06
UniRef50_A7RTS2 Cluster: Predicted protein; n=1; Nematostella ve... 54 4e-06
UniRef50_UPI0000E47D08 Cluster: PREDICTED: similar to PPAR-alpha... 53 6e-06
UniRef50_Q9A5J4 Cluster: Exoribonuclease, VacB and RNase II fami... 53 8e-06
UniRef50_Q88YG8 Cluster: Ribonuclease R; n=11; Lactobacillales|R... 53 8e-06
UniRef50_Q6ALZ0 Cluster: Related to ribonuclease R; n=1; Desulfo... 52 1e-05
UniRef50_Q11IM6 Cluster: Ribonuclease R; n=2; Alphaproteobacteri... 52 1e-05
UniRef50_Q01VX0 Cluster: Ribonuclease R; n=1; Solibacter usitatu... 52 1e-05
UniRef50_A6GC79 Cluster: Ribonuclease R; n=1; Plesiocystis pacif... 52 1e-05
UniRef50_Q5FLT5 Cluster: Ribonuclease R; n=3; Lactobacillus|Rep:... 52 2e-05
UniRef50_Q5CV75 Cluster: Ssd1p/F48E8.6-like RNAseII; n=2; Crypto... 52 2e-05
UniRef50_Q4T9U5 Cluster: Chromosome undetermined SCAF7493, whole... 51 2e-05
UniRef50_Q8PZF0 Cluster: Exoribonuclease II; n=1; Methanosarcina... 51 2e-05
UniRef50_Q8XKU6 Cluster: Ribonuclease R; n=11; Firmicutes|Rep: R... 51 3e-05
UniRef50_Q1VM63 Cluster: Ribonuclease R; n=1; Psychroflexus torq... 51 3e-05
UniRef50_Q14Q19 Cluster: Probable ribonuclease r protein; n=1; S... 51 3e-05
UniRef50_O84402 Cluster: Ribonuclease R; n=8; Chlamydiaceae|Rep:... 51 3e-05
UniRef50_Q7VIS0 Cluster: Putative uncharacterized protein; n=1; ... 50 4e-05
UniRef50_Q6F1Q7 Cluster: Virulence associated protein, ribonucle... 50 4e-05
UniRef50_Q30T59 Cluster: Exoribonuclease II; n=1; Thiomicrospira... 50 4e-05
UniRef50_Q2AEI5 Cluster: 3'-5' exoribonuclease, VacB and RNase I... 50 4e-05
UniRef50_Q1MQS9 Cluster: Exoribonuclease R; n=1; Lawsonia intrac... 50 4e-05
UniRef50_Q1DGB6 Cluster: 3'-5' exoribonuclease, VacB/RNase II fa... 50 4e-05
UniRef50_Q0BU01 Cluster: Ribonuclease R; n=1; Granulibacter beth... 50 4e-05
UniRef50_Q0AQ64 Cluster: Ribonuclease R; n=3; Rhodobacterales|Re... 50 4e-05
UniRef50_A6DBI2 Cluster: RNB-like protein; n=1; Caminibacter med... 50 4e-05
UniRef50_Q8EW72 Cluster: 3'-5' exoribonuclease RNase R; n=1; Myc... 50 5e-05
UniRef50_Q7NB22 Cluster: VacB; n=1; Mycoplasma gallisepticum|Rep... 50 5e-05
UniRef50_Q7P474 Cluster: Exoribonuclease II; n=3; Fusobacterium ... 50 5e-05
UniRef50_A6NVY9 Cluster: Putative uncharacterized protein; n=1; ... 50 5e-05
UniRef50_A6BJ76 Cluster: Putative uncharacterized protein; n=2; ... 50 5e-05
UniRef50_UPI0000E47E78 Cluster: PREDICTED: similar to PPAR-alpha... 50 7e-05
UniRef50_Q9RXG0 Cluster: Ribonuclease; n=3; Deinococcus|Rep: Rib... 50 7e-05
UniRef50_Q3A2L6 Cluster: Exoribonuclease RNase R; n=1; Pelobacte... 50 7e-05
UniRef50_Q2RPE7 Cluster: Ribonuclease R; n=7; Alphaproteobacteri... 50 7e-05
UniRef50_A6EL71 Cluster: Exoribonuclease II; n=15; Bacteroidetes... 50 7e-05
UniRef50_A4YWH1 Cluster: Ribonuclease R; n=31; Alphaproteobacter... 50 7e-05
UniRef50_A3YBG8 Cluster: Ribonuclease R; n=1; Marinomonas sp. ME... 50 7e-05
UniRef50_Q9CH00 Cluster: Ribonuclease R 1; n=46; Lactobacillales... 50 7e-05
UniRef50_UPI0000E4A47E Cluster: PREDICTED: similar to CG9425-PB,... 49 9e-05
UniRef50_Q6FZS0 Cluster: Exoribonuclease, VacB and RNase II fami... 49 9e-05
UniRef50_Q2S2D1 Cluster: Ribonuclease R; n=1; Salinibacter ruber... 49 9e-05
UniRef50_Q6SG71 Cluster: RNB-like family protein; n=4; Bacteria|... 49 9e-05
UniRef50_Q28VI9 Cluster: Ribonuclease R; n=27; Alphaproteobacter... 49 9e-05
UniRef50_A6VV57 Cluster: Ribonuclease R; n=1; Marinomonas sp. MW... 49 9e-05
UniRef50_A6CFY5 Cluster: Ribonuclease R; n=1; Planctomyces maris... 49 9e-05
UniRef50_A1AWH7 Cluster: Ribonuclease R; n=2; sulfur-oxidizing s... 49 9e-05
UniRef50_Q3SL56 Cluster: Exoribonuclease II; n=1; Thiobacillus d... 49 1e-04
UniRef50_Q3IK27 Cluster: Cold-shock RNAse R; n=13; Gammaproteoba... 49 1e-04
UniRef50_Q1Q6K5 Cluster: Similar to ribonuclease R; n=1; Candida... 49 1e-04
UniRef50_Q1NL99 Cluster: 3'-5' exoribonuclease, VacB and RNase I... 49 1e-04
UniRef50_Q1AVL2 Cluster: Exoribonuclease II; n=1; Rubrobacter xy... 49 1e-04
UniRef50_A7AQY3 Cluster: RNB-like protein; n=1; Babesia bovis|Re... 49 1e-04
UniRef50_Q6MCC7 Cluster: Putative ribonuclease R; n=1; Candidatu... 48 2e-04
UniRef50_A0Y7J7 Cluster: Ribonuclease R; n=1; marine gamma prote... 48 2e-04
UniRef50_Q67SL9 Cluster: Ribonulease R; n=7; Firmicutes|Rep: Rib... 48 2e-04
UniRef50_Q5SJU8 Cluster: Exoribonuclease; n=2; Thermus thermophi... 48 2e-04
UniRef50_Q1IJI5 Cluster: Ribonuclease R; n=1; Acidobacteria bact... 48 2e-04
UniRef50_Q0B076 Cluster: Exoribonuclease II; n=1; Syntrophomonas... 48 2e-04
UniRef50_A1K401 Cluster: Exoribonuclease II; n=32; Bacteria|Rep:... 48 2e-04
UniRef50_P56123 Cluster: Ribonuclease R; n=4; Helicobacter|Rep: ... 48 2e-04
UniRef50_Q7MQZ6 Cluster: RIBONUCLEASE; n=2; Epsilonproteobacteri... 48 3e-04
UniRef50_Q6F7U9 Cluster: Exoribonuclease R; n=5; Moraxellaceae|R... 48 3e-04
UniRef50_Q4C5D6 Cluster: Exoribonuclease II; n=6; Chroococcales|... 48 3e-04
UniRef50_Q1K2V6 Cluster: Ribonuclease R; n=1; Desulfuromonas ace... 48 3e-04
UniRef50_A6Q7D2 Cluster: Ribonuclease; n=1; Sulfurovum sp. NBC37... 48 3e-04
UniRef50_Q4UGX2 Cluster: Possible ribonuclease ii family protein... 48 3e-04
UniRef50_Q31FJ1 Cluster: Ribonuclease R; n=1; Thiomicrospira cru... 47 4e-04
UniRef50_Q1D4N8 Cluster: Ribonuclease R; n=3; Deltaproteobacteri... 47 4e-04
UniRef50_A4IWL1 Cluster: Ribonuclease R; n=11; Francisella tular... 47 4e-04
UniRef50_P75529 Cluster: Ribonuclease R; n=5; Mycoplasma|Rep: Ri... 47 4e-04
UniRef50_Q8A378 Cluster: Ribonuclease R; n=9; Bacteroidales|Rep:... 47 5e-04
UniRef50_Q4A6A7 Cluster: VACB-like ribonuclease II; n=2; Mycopla... 47 5e-04
UniRef50_Q0EWH9 Cluster: Exoribonuclease II; n=1; Mariprofundus ... 47 5e-04
UniRef50_A5KIG0 Cluster: Putative uncharacterized protein; n=2; ... 47 5e-04
UniRef50_A3ZQN3 Cluster: Ribonuclease R; n=1; Blastopirellula ma... 47 5e-04
UniRef50_Q02146 Cluster: Ribonuclease R 2; n=3; Lactococcus lact... 47 5e-04
UniRef50_Q74D34 Cluster: Ribonuclease R, putative; n=7; Desulfur... 46 7e-04
UniRef50_Q29XV9 Cluster: Possible RNAase; n=17; Campylobacter|Re... 46 7e-04
UniRef50_Q0VMF7 Cluster: Ribonuclease R; n=1; Alcanivorax borkum... 46 7e-04
UniRef50_A7HAA8 Cluster: Ribonuclease R; n=4; cellular organisms... 46 7e-04
UniRef50_A3EPY9 Cluster: Exoribonuclease R; n=1; Leptospirillum ... 46 7e-04
UniRef50_Q8KF23 Cluster: Ribonuclease II family protein; n=10; C... 46 9e-04
UniRef50_Q11XW5 Cluster: Exoribonuclease II; n=5; cellular organ... 46 9e-04
UniRef50_Q04E22 Cluster: Exoribonuclease R; n=2; Oenococcus oeni... 46 9e-04
UniRef50_Q7REV4 Cluster: Rhoptry protein; n=4; Plasmodium (Vinck... 46 9e-04
UniRef50_Q7UFR0 Cluster: Ribonuclease R; n=1; Pirellula sp.|Rep:... 46 0.001
UniRef50_Q39GY3 Cluster: 3'-5' exoribonuclease, VacB and RNase I... 46 0.001
UniRef50_Q1GTS6 Cluster: Ribonuclease R; n=8; Sphingomonadales|R... 46 0.001
UniRef50_A6SZV8 Cluster: Exoribonuclease RNAse R; n=20; Burkhold... 46 0.001
UniRef50_A3VTQ9 Cluster: 3'-5' exoribonuclease, VacB and RNase I... 46 0.001
UniRef50_A1WUS9 Cluster: Ribonuclease R; n=2; Ectothiorhodospira... 46 0.001
UniRef50_Q9PR88 Cluster: Ribonuclease R; n=1; Ureaplasma parvum|... 46 0.001
UniRef50_Q9WZI1 Cluster: Ribonuclease R; n=5; Thermotogaceae|Rep... 46 0.001
UniRef50_A5IXZ7 Cluster: Ribonuclease R (VacB-like (Shigella fle... 45 0.002
UniRef50_A1VBI0 Cluster: Ribonuclease R; n=3; Desulfovibrio|Rep:... 45 0.002
UniRef50_A4CUF3 Cluster: Exoribonuclease II; n=4; Synechococcus|... 45 0.002
UniRef50_A5K6D1 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_P57628 Cluster: Ribonuclease R; n=2; Buchnera aphidicol... 45 0.002
UniRef50_Q6KI25 Cluster: Vacb-like ribonuclease II; n=2; cellula... 44 0.003
UniRef50_A6DIQ3 Cluster: Exoribonuclease, VacB/RNB family protei... 44 0.003
UniRef50_A5EVE2 Cluster: Ribonuclease R; n=1; Dichelobacter nodo... 44 0.003
UniRef50_Q0GXV6 Cluster: Putative ribonuclease; n=1; Lactococcus... 44 0.003
UniRef50_Q8I389 Cluster: Putative uncharacterized protein PFI029... 44 0.003
UniRef50_Q98QL0 Cluster: Ribonuclease R; n=1; Mycoplasma pulmoni... 44 0.003
UniRef50_Q2S7B5 Cluster: Exoribonuclease R; n=1; Hahella chejuen... 44 0.005
UniRef50_A4BI97 Cluster: Exoribonuclease R; n=1; Reinekea sp. ME... 44 0.005
UniRef50_Q7R054 Cluster: GLP_56_56502_53413; n=1; Giardia lambli... 44 0.005
UniRef50_Q4XZG1 Cluster: Putative uncharacterized protein; n=1; ... 44 0.005
UniRef50_Q9PBZ8 Cluster: VacB protein; n=16; Xanthomonadaceae|Re... 43 0.006
UniRef50_O94525 Cluster: Ribonuclease II (RNB) family; n=1; Schi... 43 0.006
UniRef50_Q8F9Z7 Cluster: VacB protein; n=4; Leptospira|Rep: VacB... 43 0.008
UniRef50_Q4AAR6 Cluster: VACB-like ribonuclease II; n=5; Mycopla... 43 0.008
UniRef50_Q46KZ5 Cluster: Exoribonuclease R/ribonuclease II; n=2;... 43 0.008
UniRef50_Q0RY19 Cluster: Exoribonuclease R; n=3; Rhodococcus sp.... 43 0.008
UniRef50_P40611 Cluster: Ribonuclease R; n=137; Proteobacteria|R... 43 0.008
UniRef50_A6DTA8 Cluster: Putative ribonuclease R; n=1; Lentispha... 42 0.011
UniRef50_A0Y8Y7 Cluster: Exoribonuclease R; n=1; marine gamma pr... 42 0.011
UniRef50_Q1N135 Cluster: Exoribonuclease R; n=1; Oceanobacter sp... 42 0.014
UniRef50_Q5V0M7 Cluster: Ribonuclease R; n=6; Halobacteriaceae|R... 42 0.014
UniRef50_UPI0000ECA91C Cluster: Peroxisomal proliferator-activat... 42 0.019
UniRef50_Q8YXH3 Cluster: Zam protein; n=6; Cyanobacteria|Rep: Za... 42 0.019
UniRef50_Q7U6W2 Cluster: Probable ribonuclease II; n=3; Cyanobac... 42 0.019
UniRef50_A2AS03 Cluster: Novel protein (Possible orthologue of h... 41 0.025
UniRef50_Q4D9D0 Cluster: Mitochondrial exoribonuclease DSS-1, pu... 41 0.033
UniRef50_A2QYG4 Cluster: Contig An12c0030, complete genome; n=7;... 41 0.033
UniRef50_Q9KLE1 Cluster: Exoribonuclease 2; n=37; Bacteria|Rep: ... 41 0.033
UniRef50_A4HS28 Cluster: Mitochondrial exoribonuclease DSS-1, pu... 40 0.043
UniRef50_A6F7X7 Cluster: Exoribonuclease II; n=1; Moritella sp. ... 40 0.057
UniRef50_A1U792 Cluster: VacB and RNase II family 3'-5' exoribon... 40 0.057
UniRef50_Q54N92 Cluster: Putative uncharacterized protein; n=1; ... 40 0.057
UniRef50_Q9BYK8 Cluster: Peroxisomal proliferator-activated rece... 40 0.057
UniRef50_A1IC27 Cluster: Exoribonuclease II; n=1; Candidatus Des... 40 0.075
UniRef50_A1AXH8 Cluster: Ribonuclease II; n=2; sulfur-oxidizing ... 40 0.075
UniRef50_A5GTC0 Cluster: Exoribonuclease R/ribonuclease II; n=1;... 39 0.099
UniRef50_Q38EM3 Cluster: Mitochondrial exoribonuclease DSS-1; n=... 39 0.099
UniRef50_P47950 Cluster: Mitochondrial protein cyt-4; n=1; Neuro... 39 0.099
UniRef50_Q5SI46 Cluster: Ribonuclease II family protein; n=3; De... 39 0.13
UniRef50_Q3AVJ3 Cluster: Exoribonuclease II; n=3; Synechococcus|... 39 0.13
UniRef50_Q6CBW1 Cluster: Similar to sp|P39112| Saccharomyces cer... 39 0.13
UniRef50_Q9RYD0 Cluster: Ribonuclease II family protein; n=1; De... 38 0.17
UniRef50_Q73MY5 Cluster: RNB-like family protein; n=1; Treponema... 38 0.17
UniRef50_Q2FP21 Cluster: Ribonuclease II; n=1; Methanospirillum ... 38 0.17
UniRef50_UPI00006A279F Cluster: Peroxisomal proliferator-activat... 38 0.23
UniRef50_A5GLA4 Cluster: Exoribonuclease R/ribonuclease II; n=2;... 38 0.23
UniRef50_Q010V1 Cluster: Ribonuclease II; n=2; Ostreococcus|Rep:... 38 0.23
UniRef50_A3RLY2 Cluster: Chloroplast ribonuclease; n=1; Chlamydo... 38 0.23
UniRef50_A7BS43 Cluster: Exoribonuclease II; n=1; Beggiatoa sp. ... 38 0.30
UniRef50_A1SWZ6 Cluster: Exoribonuclease II; n=2; Psychromonas|R... 38 0.30
UniRef50_A0LG74 Cluster: Exoribonuclease II; n=1; Syntrophobacte... 38 0.30
UniRef50_Q6NQJ6 Cluster: At5g02250; n=3; core eudicotyledons|Rep... 38 0.30
UniRef50_Q2R1C7 Cluster: S1 self-incompatibility locus-linked po... 38 0.30
UniRef50_P59107 Cluster: Exoribonuclease 2; n=42; Gammaproteobac... 38 0.30
UniRef50_P44440 Cluster: Exoribonuclease 2; n=21; Pasteurellacea... 38 0.30
UniRef50_UPI0000F1E528 Cluster: PREDICTED: similar to KIAA1769 p... 37 0.40
UniRef50_O83783 Cluster: Exoribonuclease II; n=1; Treponema pall... 37 0.40
UniRef50_Q0RYH9 Cluster: Probable exoribonuclease II; n=1; Rhodo... 37 0.40
UniRef50_A6F5G1 Cluster: Exoribonuclease R; n=1; Marinobacter al... 37 0.40
UniRef50_Q2HG64 Cluster: Putative uncharacterized protein; n=1; ... 37 0.53
UniRef50_Q0W6Z1 Cluster: Ribonuclease II family protein, C-termi... 37 0.53
UniRef50_P57354 Cluster: Exoribonuclease 2; n=6; Gammaproteobact... 37 0.53
UniRef50_A0Z0P5 Cluster: Exoribonuclease R; n=3; Bacteria|Rep: E... 36 0.70
UniRef50_Q0V5W7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.70
UniRef50_A6PKV3 Cluster: Ribonuclease II; n=1; Victivallis vaden... 36 0.93
UniRef50_Q54IW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.93
UniRef50_UPI000023E806 Cluster: hypothetical protein FG01251.1; ... 36 1.2
UniRef50_Q31MZ3 Cluster: Putative ribonuclease II; n=3; Synechoc... 36 1.2
UniRef50_Q01V71 Cluster: Exoribonuclease II; n=1; Solibacter usi... 36 1.2
UniRef50_A7JFK7 Cluster: Ribonuclease II family protein; n=10; F... 36 1.2
UniRef50_Q22Z15 Cluster: Zinc finger domain, LSD1 subclass famil... 36 1.2
UniRef50_Q46363 Cluster: Acetazolamide conferring resistance pro... 36 1.2
UniRef50_P73177 Cluster: Uncharacterized ribonuclease sll1290; n... 36 1.2
UniRef50_Q129F3 Cluster: Exoribonuclease II; n=6; cellular organ... 35 1.6
UniRef50_A7I6H4 Cluster: Ribonuclease II; n=1; Candidatus Methan... 35 1.6
UniRef50_Q5MZZ6 Cluster: Protein conferring resistance to acetaz... 35 2.1
UniRef50_Q7VBX3 Cluster: Exoribonuclease R/ribonuclease II; n=1;... 34 2.8
UniRef50_A3S2U2 Cluster: Exoribonuclease R/ribonuclease II; n=1;... 34 2.8
UniRef50_A3PCZ0 Cluster: Probable ribonuclease II; n=5; Prochlor... 34 3.7
UniRef50_Q6WIX2 Cluster: S1 self-incompatibility locus-linked po... 33 4.9
UniRef50_Q553P9 Cluster: Putative uncharacterized protein; n=1; ... 33 4.9
UniRef50_A6XH07 Cluster: Estrogen receptor variant; n=1; Homo sa... 33 6.5
UniRef50_Q1DPE6 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q2JIR4 Cluster: Exoribonuclease, VacB/RNB family; n=3; ... 33 8.6
UniRef50_A7EG05 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
UniRef50_A4QVD5 Cluster: Putative uncharacterized protein; n=1; ... 33 8.6
>UniRef50_UPI0000D56C52 Cluster: PREDICTED: similar to CG16940-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG16940-PA, isoform A - Tribolium castaneum
Length = 844
Score = 116 bits (279), Expect = 5e-25
Identities = 52/77 (67%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
Frame = +1
Query: 28 YVGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRY 204
Y+ D+ K R +VLN L AKPM RA+YFCA A +++ ++ HYAL++P+YTHFTSPIRRY
Sbjct: 615 YISEDDFGKARMIVLNHLLAKPMKRARYFCAGALEEELDYSHYALSIPIYTHFTSPIRRY 674
Query: 205 ADIMVHRLLAASLNYRE 255
ADIMVHRLLAASLNYRE
Sbjct: 675 ADIMVHRLLAASLNYRE 691
Score = 77.0 bits (181), Expect = 4e-13
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ L P W ++V IA CN+QKY+AK+AGE S++L+ ++E N P++ V
Sbjct: 683 LAASLNYREKPTWAPEEVATIAETCNRQKYHAKRAGEASSDLFLAHFVEKNQPVIENAVV 742
Query: 408 VDIREKYIDVIIVSMGLNRRIF 473
VD +E+ IDVI++ G RI+
Sbjct: 743 VDAKERSIDVIVIRTGSVVRIY 764
>UniRef50_Q4SNY9 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 15 SCAF14542, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 213
Score = 102 bits (244), Expect = 9e-21
Identities = 47/77 (61%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDE-FQHYALNVPLYTHFTSPIRRYA 207
VG D R VL +C++PM A YFC + +++ F+HYALNVPLYTHFTSPIRRYA
Sbjct: 69 VGDDKYSSARKEVLTHMCSRPMQMALYFCTGSFSEEKLFKHYALNVPLYTHFTSPIRRYA 128
Query: 208 DIMVHRLLAASLNYREL 258
D++VHRLLAASL YR L
Sbjct: 129 DVVVHRLLAASLKYRGL 145
>UniRef50_Q8NF60 Cluster: FLJ00327 protein; n=2; Catarrhini|Rep:
FLJ00327 protein - Homo sapiens (Human)
Length = 266
Score = 99 bits (238), Expect = 5e-20
Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 NSARAXYVGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFT 186
N + G D R VL +C++PM A YFC+ D +F+HYALNVPLYTHFT
Sbjct: 90 NKSLTQTFGDDKYSLARKEVLTNMCSRPMQMALYFCSGLLQDPAQFRHYALNVPLYTHFT 149
Query: 187 SPIRRYADIMVHRLLAASLNYRE 255
SPIRR+AD++VHRLLAA+L YRE
Sbjct: 150 SPIRRFADVLVHRLLAAALGYRE 172
>UniRef50_Q17L93 Cluster: Ribonuclease; n=2; Culicidae|Rep:
Ribonuclease - Aedes aegypti (Yellowfever mosquito)
Length = 1210
Score = 95.1 bits (226), Expect = 1e-18
Identities = 42/65 (64%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAA-ACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
VLN++ AKPMTRA+YFC+A A D +EF H+AL +P+YTHFTSPIRRYAD +VHR+LA +L
Sbjct: 957 VLNIMIAKPMTRARYFCSAFASDPEEFHHFALAIPMYTHFTSPIRRYADCLVHRVLAGAL 1016
Query: 244 NYREL 258
E+
Sbjct: 1017 AVDEV 1021
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/76 (30%), Positives = 43/76 (56%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
++ L + P D++ + CN +KYNAK AG+ S+ LY Y++ + + E AV
Sbjct: 1012 LAGALAVDEVPTRSPDELSKLTGICNIKKYNAKLAGDASSLLYFKHYLKQRTSLEAEAAV 1071
Query: 408 VDIREKYIDVIIVSMG 455
+DI + I+++++ G
Sbjct: 1072 LDIGPQQIELVLIETG 1087
>UniRef50_UPI0000E47D53 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 807
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/60 (68%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDE-FQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
VL +L +KPM +A+YFC A+ +D+E ++HYALNVPLYTHFTSPIRRY DI+VHR+LA+SL
Sbjct: 614 VLTVLYSKPMQKARYFCCASLEDEEMYRHYALNVPLYTHFTSPIRRYPDILVHRMLASSL 673
Score = 45.6 bits (103), Expect = 0.001
Identities = 29/122 (23%), Positives = 65/122 (53%), Gaps = 2/122 (1%)
Frame = +3
Query: 258 PAWQEDDVRMI--AAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYI 431
P + D R+ A +CN K +AK+ + S++L+ ++++ P+V + V+ + ++
Sbjct: 677 PVMERDPERLQRQAMRCNDAKDSAKEVSDKSSDLFFCQFVKECGPLVEKAIVMAVLDRSF 736
Query: 432 DVIIVSMGLNRRIFFQ**FSWRV*VYRHEELAKLARMELKWKPVE*IARNXTXLIXVFSH 611
DV+I+++G +R++ + + +AK + L+W+ E ++ T +I +FS
Sbjct: 737 DVLIINLGQVKRVYCN---AIPLKKLIAVPIAKYYELTLEWED-EAGSKGVTQVIKMFSQ 792
Query: 612 CT 617
T
Sbjct: 793 VT 794
>UniRef50_A7S1B6 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 766
Score = 93.9 bits (223), Expect = 3e-18
Identities = 46/84 (54%), Positives = 57/84 (67%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 NSARAXYVGPDNTDKGRAM--VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHF 183
NS+++ V G A +L L KPM A YFCA +++E+ HYAL+VPLYTHF
Sbjct: 552 NSSKSIQVSLAQFPSGSAQHEILVQLTMKPMKNALYFCAGTVEEEEYGHYALSVPLYTHF 611
Query: 184 TSPIRRYADIMVHRLLAASLNYRE 255
TSPIRRYAD++VHRLLAASL E
Sbjct: 612 TSPIRRYADVIVHRLLAASLELAE 635
Score = 52.0 bits (119), Expect = 1e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +3
Query: 276 DVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVIIVSMG 455
DV IA CN K AK AGE+S+EL+ ++ P+ +G V+ I + DV + ++G
Sbjct: 643 DVDSIAGHCNDCKLAAKTAGELSSELFFAIFVRECGPLEEDGYVLGIMDMSFDVFVPALG 702
Query: 456 LNRRIF 473
+ +RI+
Sbjct: 703 VTKRIY 708
>UniRef50_UPI000065FEE8 Cluster: DIS3 mitotic control homolog (S.
cerevisiae)-like 2; n=5; Euteleostomi|Rep: DIS3 mitotic
control homolog (S. cerevisiae)-like 2 - Takifugu
rubripes
Length = 811
Score = 93.5 bits (222), Expect = 4e-18
Identities = 43/71 (60%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
Frame = +1
Query: 34 GPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYAD 210
G D R VL +C++PM A YFC A + + F+HYALNVPLYTHFTSPIRRYAD
Sbjct: 601 GDDKYSSARKEVLTHMCSRPMQMALYFCTGAFNKETNFKHYALNVPLYTHFTSPIRRYAD 660
Query: 211 IMVHRLLAASL 243
++VHRLL ASL
Sbjct: 661 VIVHRLLVASL 671
Score = 48.8 bits (111), Expect = 1e-04
Identities = 24/94 (25%), Positives = 54/94 (57%)
Frame = +3
Query: 273 DDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVIIVSM 452
D V+ A+ CN +K +K+ E+S+EL+ +++ P+ +E V+ + ++ DV+++
Sbjct: 682 DQVQKQASHCNDKKKVSKRVQELSSELFFGVFVKECGPLDSEAMVMGVLDQSFDVLVLRY 741
Query: 453 GLNRRIFFQ**FSWRV*VYRHEELAKLARMELKW 554
G+ +RI+ + + +RH ++ K + + L W
Sbjct: 742 GVQKRIYCK----VGLVSFRHHKVGKKSELVLLW 771
>UniRef50_UPI0000DB782F Cluster: PREDICTED: similar to CG16940-PA,
isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG16940-PA, isoform A - Apis mellifera
Length = 786
Score = 91.5 bits (217), Expect = 2e-17
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 1/72 (1%)
Frame = +1
Query: 46 TDKGRAMVLNLLCAKPMTRAKYFCAAACD-DDEFQHYALNVPLYTHFTSPIRRYADIMVH 222
T K R MV+N LC+K MTRA Y C++ ++E +HYALNVPLYTHFTSPIRRY+D +VH
Sbjct: 576 TMKYRMMVINSLCSKAMTRATYICSSTVTAEEELRHYALNVPLYTHFTSPIRRYSDCVVH 635
Query: 223 RLLAASLNYREL 258
RLL +++ E+
Sbjct: 636 RLLYSTMKNVEM 647
Score = 64.1 bits (149), Expect = 3e-09
Identities = 29/69 (42%), Positives = 44/69 (63%)
Frame = +3
Query: 264 WQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVII 443
W + + IAA CN +KY+AK A E S+ELY I+ PIVT G V+++ E +I+VI+
Sbjct: 651 WSKKLCKSIAANCNIKKYSAKMAQERSSELYFTYLIDLKGPIVTMGIVLNVNENFINVIL 710
Query: 444 VSMGLNRRI 470
+G+ R+
Sbjct: 711 CQLGIKLRV 719
>UniRef50_Q00X95 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp44/Dis3; n=2; Ostreococcus|Rep: Exosomal
3'-5' exoribonuclease complex, subunit Rrp44/Dis3 -
Ostreococcus tauri
Length = 609
Score = 87.0 bits (206), Expect = 4e-16
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ LL KPM AKYFC D++ + HYAL P YTHFTSPIRRY DI+VHRLLAA++
Sbjct: 331 IVQLLATKPMQLAKYFCTGTIDEEHWHHYALAAPFYTHFTSPIRRYPDIIVHRLLAAAIE 390
Query: 247 Y 249
+
Sbjct: 391 H 391
Score = 36.3 bits (80), Expect = 0.70
Identities = 19/64 (29%), Positives = 32/64 (50%)
Frame = +3
Query: 288 IAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVIIVSMGLNRR 467
+A CN +K AK A E S L+ KY++ N +V V + +Y+ + S G +
Sbjct: 419 VANHCNDRKLAAKYAQERSQHLFLCKYLQKNH-LVARAIVRQLGVQYVIAYLPSYGFEIK 477
Query: 468 IFFQ 479
I+ +
Sbjct: 478 IYLE 481
>UniRef50_A7PKV4 Cluster: Chromosome chr7 scaffold_20, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr7 scaffold_20, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 943
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/64 (57%), Positives = 46/64 (71%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ +L + MT+A YFC+ EF HY L PLYTHFTSPIRRYAD++VHRLLAASL
Sbjct: 748 LIRILATRCMTQAVYFCSGDLSPPEFHHYGLAAPLYTHFTSPIRRYADVIVHRLLAASLG 807
Query: 247 YREL 258
+L
Sbjct: 808 LYKL 811
>UniRef50_Q5KDY7 Cluster: SSD1 protein, putative; n=2; Filobasidiella
neoformans|Rep: SSD1 protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1671
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/65 (56%), Positives = 47/65 (72%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D A+ ++LL K + RA+YFCA D +F H+ LN PLYTHFTSPIRRYAD++VHR+
Sbjct: 1387 DNDSALCIDLLRKKVIQRARYFCAGMLDIAKFAHWGLNTPLYTHFTSPIRRYADVLVHRM 1446
Query: 229 LAASL 243
L A L
Sbjct: 1447 LDACL 1451
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 273 DDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYI----EXNSPIVTEGAVVDIREKYIDVI 440
D V A QCN +K +AK A E S L+ I E P+V E V ++ E DVI
Sbjct: 1466 DQVAKAAQQCNMKKQSAKLAEEQSVHLFLCILINDLTEHYGPVVREARVTNVLETAFDVI 1525
Query: 441 IVSMGLNRRI 470
I G+ +R+
Sbjct: 1526 IPEFGVEKRV 1535
>UniRef50_Q0CT74 Cluster: Mitotic control protein dis3; n=16;
Ascomycota|Rep: Mitotic control protein dis3 -
Aspergillus terreus (strain NIH 2624)
Length = 1034
Score = 83.8 bits (198), Expect = 4e-15
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ +L + MT A+YFCA A + EF+HY L P+YTHFTSPIRRYAD++VHR LA+++
Sbjct: 795 LVRILATRCMTSAEYFCAGAHGESEFRHYGLASPIYTHFTSPIRRYADLLVHRQLASAIG 854
Query: 247 YRELQHGR 270
Y E + GR
Sbjct: 855 Y-EGEDGR 861
>UniRef50_Q8IRJ7 Cluster: CG16940-PC, isoform C; n=4; Sophophora|Rep:
CG16940-PC, isoform C - Drosophila melanogaster (Fruit
fly)
Length = 1044
Score = 82.2 bits (194), Expect = 1e-14
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L+ L KPM RA YFC+ + + HYAL++P+YTHFTSPIRRY DI+VHRLLAA+L
Sbjct: 851 LSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
Query: 247 Y 249
Y
Sbjct: 911 Y 911
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ LK P DD+ + N++KYNAKKAGE S LY +Y+ I V
Sbjct: 905 LAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVV 964
Query: 408 VDIREKYIDVIIVSMG 455
++I + ++V+ + G
Sbjct: 965 IEIFQHMMNVVTLESG 980
>UniRef50_Q09568 Cluster: Uncharacterized ribonuclease F48E8.6; n=2;
Caenorhabditis|Rep: Uncharacterized ribonuclease F48E8.6
- Caenorhabditis elegans
Length = 817
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/76 (51%), Positives = 47/76 (61%)
Frame = +1
Query: 28 YVGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYA 207
Y G D V++ L KPM +AKYFC + H+ALNV YTHFTSPIRRY
Sbjct: 583 YQGKSRLDMCIRQVISSLTIKPMQQAKYFCTFEMPLSFYHHFALNVDHYTHFTSPIRRYP 642
Query: 208 DIMVHRLLAASLNYRE 255
D++VHR LAA+L Y E
Sbjct: 643 DVIVHRQLAAALGYNE 658
>UniRef50_UPI00015B4E71 Cluster: PREDICTED: similar to ribonuclease;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
ribonuclease - Nasonia vitripennis
Length = 961
Score = 81.8 bits (193), Expect = 1e-14
Identities = 40/66 (60%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Frame = +1
Query: 64 MVLNLLCAKPMTRAKYFCAAACDDDE-FQHYALNVPLYTHFTSPIRRYADIMVHRLLAAS 240
MV+N LCAK MTRA Y C+A+ E +HYALN YTHFTSPIRRY D +VHRLL AS
Sbjct: 757 MVINSLCAKSMTRAVYKCSASVKTKEALRHYALNAEYYTHFTSPIRRYPDCVVHRLLYAS 816
Query: 241 LNYREL 258
+ + L
Sbjct: 817 IKNQPL 822
Score = 46.0 bits (104), Expect = 9e-04
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 264 WQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVII 443
W +A CN +KY AK A E S LY ++ + V+D++E+ D ++
Sbjct: 826 WSSKICARVATNCNTKKYLAKMAQEQSNALYFTYMLDLRGSMNALAIVMDVKERSADAML 885
Query: 444 VSMGLNRRIFF 476
GL R++F
Sbjct: 886 CDTGLKVRLYF 896
>UniRef50_Q23DE7 Cluster: RNB-like protein; n=1; Tetrahymena
thermophila SB210|Rep: RNB-like protein - Tetrahymena
thermophila SB210
Length = 946
Score = 81.8 bits (193), Expect = 1e-14
Identities = 34/60 (56%), Positives = 44/60 (73%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ ++ + M A YFC A D EF HY L PLYTHFTSPIRRYAD++VHRLLAA+++
Sbjct: 748 LVRIMTTRSMNEATYFCTADADYPEFYHYGLAAPLYTHFTSPIRRYADVLVHRLLAAAID 807
>UniRef50_Q54XT5 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1343
Score = 81.4 bits (192), Expect = 2e-14
Identities = 36/66 (54%), Positives = 48/66 (72%)
Frame = +1
Query: 46 TDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHR 225
TD M + LL + M A+YFC+ ++++++HYALN P YTHFTSPIRRYADI+VHR
Sbjct: 1118 TDINILMAIQLLSIRSMKLAEYFCSNNEEEEDWRHYALNAPFYTHFTSPIRRYADIIVHR 1177
Query: 226 LLAASL 243
LL S+
Sbjct: 1178 LLDLSI 1183
Score = 41.5 bits (93), Expect = 0.019
Identities = 19/67 (28%), Positives = 35/67 (52%)
Frame = +3
Query: 273 DDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVIIVSM 452
+ + I CN++K NA+KA E S +++ +E N P TE ++ YI I+
Sbjct: 1200 ESITAICKNCNEKKLNARKAQERSDKVFLCVLLE-NHPTTTEAVALNTGASYIVCIVPQF 1258
Query: 453 GLNRRIF 473
G ++++
Sbjct: 1259 GSEQKVY 1265
>UniRef50_A7NV97 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=5; core eudicotyledons|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 844
Score = 79.4 bits (187), Expect = 8e-14
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDD--EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAAS 240
+L ++PM A YFC+ D+ E+ HYAL VPLYTHFTSP+RRY DI+VHR LAA+
Sbjct: 550 ILLSYASRPMQLATYFCSGDLKDNKNEWSHYALAVPLYTHFTSPLRRYPDIIVHRTLAAA 609
Query: 241 LNYRE--LQHGRKM 276
+ E L+HG K+
Sbjct: 610 IEAEELYLKHGAKI 623
>UniRef50_Q9SNK4 Cluster: EST AU068209(C12438) corresponds to a
region of the predicted gene; n=2; Magnoliophyta|Rep:
EST AU068209(C12438) corresponds to a region of the
predicted gene - Oryza sativa subsp. japonica (Rice)
Length = 908
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/72 (50%), Positives = 47/72 (65%)
Frame = +1
Query: 43 NTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVH 222
N D ++ +L + MT+A YFC+ E+ HY L LYTHFTSPIRRYAD++VH
Sbjct: 719 NDDPYFNKLIRILATRCMTQAVYFCSGDLTFSEYYHYGLAASLYTHFTSPIRRYADVIVH 778
Query: 223 RLLAASLNYREL 258
RLLAA+L +L
Sbjct: 779 RLLAAALEIAKL 790
>UniRef50_Q4P861 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1012
Score = 77.4 bits (182), Expect = 3e-13
Identities = 33/73 (45%), Positives = 46/73 (63%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
D D ++ ++ + M A+YFC+ + D F HY L +YTHFTSPIRRYAD++
Sbjct: 797 DPKDPAFNTLVRIMATRCMLSAEYFCSGSVARDTFSHYGLAAGMYTHFTSPIRRYADVLA 856
Query: 220 HRLLAASLNYREL 258
HR LAA++NY L
Sbjct: 857 HRQLAAAINYEPL 869
>UniRef50_Q960A7 Cluster: SD10981p; n=13; Coelomata|Rep: SD10981p -
Drosophila melanogaster (Fruit fly)
Length = 982
Score = 76.6 bits (180), Expect = 5e-13
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
++ +L + M +A YF + + +EF HY L P+YTHFTSPIRRY+DIMVHRLLAAS+
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
>UniRef50_P37202 Cluster: Mitotic control protein dis3; n=1;
Schizosaccharomyces pombe|Rep: Mitotic control protein
dis3 - Schizosaccharomyces pombe (Fission yeast)
Length = 970
Score = 76.6 bits (180), Expect = 5e-13
Identities = 31/64 (48%), Positives = 45/64 (70%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+L +L + M A+YFC+ +F+HY L P+YTHFTSPIRRYAD++ HR LAA+++
Sbjct: 769 LLRILTTRCMLSAEYFCSGTFAPPDFRHYGLASPIYTHFTSPIRRYADVLAHRQLAAAID 828
Query: 247 YREL 258
Y +
Sbjct: 829 YETI 832
>UniRef50_UPI000049906F Cluster: exosome complex exonuclease; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: exosome complex
exonuclease - Entamoeba histolytica HM-1:IMSS
Length = 901
Score = 76.2 bits (179), Expect = 7e-13
Identities = 33/72 (45%), Positives = 48/72 (66%)
Frame = +1
Query: 43 NTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVH 222
N D ++ +L + M +AKYF + +EF+HY L +YTHFTSPIRRYAD+MVH
Sbjct: 703 NEDPIIGKIMRILVTRCMQQAKYFSSGYFSYNEFRHYGLAAEIYTHFTSPIRRYADVMVH 762
Query: 223 RLLAASLNYREL 258
RLLA ++ + ++
Sbjct: 763 RLLAQAIGFDQI 774
>UniRef50_P24276 Cluster: Protein SSD1; n=6; Saccharomycetales|Rep:
Protein SSD1 - Saccharomyces cerevisiae (Baker's yeast)
Length = 1250
Score = 76.2 bits (179), Expect = 7e-13
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+ +L K M RA+YF A D D++ HYALN+P+YTHFT+P+RRYAD +VHR L A ++
Sbjct: 957 IEILLFKTMPRARYFIAGKVDPDQYGHYALNLPIYTHFTAPMRRYADHVVHRQLKAVIH 1015
>UniRef50_Q4RNE5 Cluster: Chromosome undetermined SCAF15013, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF15013,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 855
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/63 (53%), Positives = 45/63 (71%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+L +L + M +A YFC+ D +F HY L P+YTHFTSPIRRYADI+VHRLLA + +
Sbjct: 652 LLRILATRCMMQAVYFCSGM--DSDFHHYGLASPIYTHFTSPIRRYADIVVHRLLAVACS 709
Query: 247 YRE 255
R+
Sbjct: 710 RRQ 712
>UniRef50_Q4DG23 Cluster: RRP44p homologue, putative; n=4;
Trypanosoma|Rep: RRP44p homologue, putative - Trypanosoma
cruzi
Length = 972
Score = 74.9 bits (176), Expect = 2e-12
Identities = 36/97 (37%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ +L + + +A+YF ++ DEF H+ L +P+YTHFTSPIRRYAD++VHR LAA+L
Sbjct: 737 LIRILVTRCLRQAQYFSSSEVSQDEFYHFGLAMPIYTHFTSPIRRYADVIVHRQLAAALG 796
Query: 247 YREL--QHGRKMMYA**LLNVTNRSTMLKRLVKCQQN 351
++ +H + N+ R +R + QN
Sbjct: 797 IMQVSEKHTDSVKMEAVAANINYRHEQAQRAGRDSQN 833
>UniRef50_A2FUQ4 Cluster: RNB-like protein; n=1; Trichomonas
vaginalis G3|Rep: RNB-like protein - Trichomonas
vaginalis G3
Length = 863
Score = 74.9 bits (176), Expect = 2e-12
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ ++ + M AKYF A + F+HY L +P+YTHFTSPIRRYAD++VHR LAA++
Sbjct: 674 IVRIMTTRCMQFAKYFAAGTQSYENFRHYGLAMPIYTHFTSPIRRYADLIVHRQLAAAIG 733
Query: 247 Y 249
Y
Sbjct: 734 Y 734
>UniRef50_A6QWR5 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative uncharacterized
protein - Ajellomyces capsulatus NAm1
Length = 1344
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
+ L K M RAKY+ A +D+ QHY LN+P+YTHFT+P RRYADI+VHR L A L+
Sbjct: 993 METLLLKAMQRAKYYVAGNMTEDQRQHYVLNLPVYTHFTNPSRRYADIIVHRQLEAVLSN 1052
Query: 250 RE 255
E
Sbjct: 1053 SE 1054
Score = 36.3 bits (80), Expect = 0.70
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Frame = +3
Query: 273 DDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYI-----EXNSPIVTEGAVVDIREKYIDV 437
+++ A QCN +K +A+ A E S + + + + E +++EG V+ + E DV
Sbjct: 1060 ENLTKTAEQCNNKKDSAQTAQEQSVHIESCRIMDKKRSEIGGDLISEGIVLCVYESAFDV 1119
Query: 438 IIVSMGLNRRI 470
+I G +R+
Sbjct: 1120 LIPEYGFEKRV 1130
>UniRef50_Q7QUJ8 Cluster: GLP_436_41516_39297; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_436_41516_39297 - Giardia lamblia
ATCC 50803
Length = 739
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/64 (51%), Positives = 45/64 (70%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D + ++ + + M AKYF ++ DEF HY L +P+YTHFTSPIRRY+DI+VHRL
Sbjct: 506 DMKQISIVRQMLTRCMMLAKYFVSSEYTVDEFYHYGLALPIYTHFTSPIRRYSDILVHRL 565
Query: 229 LAAS 240
LAA+
Sbjct: 566 LAAA 569
>UniRef50_A0CC06 Cluster: Chromosome undetermined scaffold_166,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_166,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 897
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/64 (51%), Positives = 42/64 (65%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ ++ + M A Y C A D E HY L LYTHFTSPIRRYAD++VHRLLAAS++
Sbjct: 714 LIRMITTRCMNEALYVCTADVDYPELYHYGLAAELYTHFTSPIRRYADVLVHRLLAASID 773
Query: 247 YREL 258
L
Sbjct: 774 LESL 777
>UniRef50_Q9Y2L1 Cluster: Exosome complex exonuclease RRP44; n=35;
Coelomata|Rep: Exosome complex exonuclease RRP44 - Homo
sapiens (Human)
Length = 958
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/59 (54%), Positives = 44/59 (74%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+L +L + M +A YFC+ D++F HY L P+YTHFTSPIRRYAD++VHRLLA ++
Sbjct: 739 LLRILATRCMMQAVYFCSGM--DNDFHHYGLASPIYTHFTSPIRRYADVIVHRLLAVAI 795
>UniRef50_Q4Q8N7 Cluster: Rrp44p homologue, putative; n=3;
Leishmania|Rep: Rrp44p homologue, putative - Leishmania
major
Length = 920
Score = 73.3 bits (172), Expect = 5e-12
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ +L + + +A+YF + DEF H+ L +P+YTHFTSPIRRYAD++VHR LAA++
Sbjct: 670 LIRILTTRCLRQAQYFSSGGIPKDEFYHFGLAMPIYTHFTSPIRRYADVLVHRQLAAAIG 729
Query: 247 YREL 258
+
Sbjct: 730 IESI 733
>UniRef50_O13327 Cluster: Protein phosphatase Ssd1 homolog; n=6;
Saccharomycetales|Rep: Protein phosphatase Ssd1 homolog -
Candida albicans (Yeast)
Length = 1262
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/66 (48%), Positives = 43/66 (65%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D + + L K M+R +Y+ A D D + HY N+PLYTHFT+P+RRYAD++VHR
Sbjct: 937 DPVKRKCVETLLYKCMSRGRYYVAGKQDTDSYAHYYFNLPLYTHFTAPLRRYADLIVHRQ 996
Query: 229 LAASLN 246
L A LN
Sbjct: 997 LKAVLN 1002
>UniRef50_A5E347 Cluster: Protein SSD1; n=1; Lodderomyces elongisporus
NRRL YB-4239|Rep: Protein SSD1 - Lodderomyces
elongisporus (Yeast) (Saccharomyces elongisporus)
Length = 1404
Score = 72.9 bits (171), Expect = 7e-12
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D + + +L K M+R KY+ A D D + HY LN+PLYTHF++P+RRYAD++VHR
Sbjct: 1049 DPVKRQCVEILLYKCMSRGKYYVAGKQDPDTYGHYYLNLPLYTHFSAPLRRYADLIVHRQ 1108
Query: 229 LAASLN 246
L A L+
Sbjct: 1109 LKAVLS 1114
>UniRef50_Q69Z56 Cluster: MKIAA1955 protein; n=17; Euteleostomi|Rep:
MKIAA1955 protein - Mus musculus (Mouse)
Length = 1073
Score = 72.5 bits (170), Expect = 9e-12
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+L + + M+ A YF +C ++EF HY L + YTHFTSPIRRY+DI+VHRLL A+++
Sbjct: 777 LLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS 836
>UniRef50_Q8WTU9 Cluster: DIS3 mitotic control homolog (S.
cerevisiae)-like; n=15; Eutheria|Rep: DIS3 mitotic
control homolog (S. cerevisiae)-like - Homo sapiens
(Human)
Length = 971
Score = 72.5 bits (170), Expect = 9e-12
Identities = 30/60 (50%), Positives = 43/60 (71%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+L + + M+ A YF +C ++EF HY L + YTHFTSPIRRY+DI+VHRLL A+++
Sbjct: 674 LLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS 733
>UniRef50_A6RWQ8 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 826
Score = 71.7 bits (168), Expect = 2e-11
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ ++ + M A+YFC+ EF+HY L +YTHFTSPIRRYAD++ HR LAA+++
Sbjct: 625 LVRIMATRCMMSAEYFCSGTQAYPEFRHYGLASEIYTHFTSPIRRYADLVAHRQLAAAID 684
Query: 247 YREL 258
Y L
Sbjct: 685 YEPL 688
>UniRef50_A7S7H2 Cluster: Predicted protein; n=2; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1048
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/59 (54%), Positives = 41/59 (69%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+L +L + M+ A YF + DEF HY L + YTHFTSPIRRYAD++VHRLL A+L
Sbjct: 759 LLRILAVQAMSSALYFSTGSVSVDEFVHYGLALDRYTHFTSPIRRYADVIVHRLLMAAL 817
>UniRef50_UPI0000E4632C Cluster: PREDICTED: similar to mKIAA1955
protein; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to mKIAA1955 protein -
Strongylocentrotus purpuratus
Length = 887
Score = 70.9 bits (166), Expect = 3e-11
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
D D +L L K M+ A YF + D+F HY L + YTHFTSPIRRYADI+V
Sbjct: 744 DRRDPVFNKILRSLATKAMSNALYFSTGSLSVDQFFHYGLAMDRYTHFTSPIRRYADIIV 803
Query: 220 HRLLAASL-NYRELQHG 267
HRLL A++ RE + G
Sbjct: 804 HRLLLAAVEEEREAEIG 820
>UniRef50_Q5BYU7 Cluster: SJCHGC07896 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07896 protein - Schistosoma
japonicum (Blood fluke)
Length = 184
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/70 (52%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDD--DEFQHYALNVPLYTHFTSPIRRYADI 213
D D V+ L + MT A YF + + D+F HY L + LYTHFTSPIRRYADI
Sbjct: 96 DPNDPEVNKVVRQLVTRTMTNALYFSTGSSNMTLDQFSHYGLALNLYTHFTSPIRRYADI 155
Query: 214 MVHRLLAASL 243
+VHRLL ASL
Sbjct: 156 IVHRLLLASL 165
>UniRef50_Q4UH40 Cluster: Exosome complex exonuclease rrp44,
putative; n=2; Theileria|Rep: Exosome complex
exonuclease rrp44, putative - Theileria annulata
Length = 955
Score = 70.5 bits (165), Expect = 4e-11
Identities = 32/61 (52%), Positives = 44/61 (72%)
Frame = +1
Query: 76 LLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRE 255
+L + M++A Y + D+DEF+HY L YTHFTSPIRRYAD++VHRLLA++L+
Sbjct: 776 ILTTRTMSQALYRNSNDLDEDEFKHYGLCCEYYTHFTSPIRRYADVIVHRLLASALDLAP 835
Query: 256 L 258
L
Sbjct: 836 L 836
>UniRef50_Q54BH9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1006
Score = 69.3 bits (162), Expect = 8e-11
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
D D + ++ + M+ AKYF + + ++F HY L +YTHFTSPIRRY DI+V
Sbjct: 734 DKNDSYFNTLCRIMTTRCMSPAKYFSSGSLPYEDFNHYGLATDIYTHFTSPIRRYPDIIV 793
Query: 220 HRLLAASLNYREL 258
HRLLA+++ + +
Sbjct: 794 HRLLASAIGIQSV 806
>UniRef50_Q6MYZ1 Cluster: Protein phosphatase ssd1 homologue,
putative; n=18; Pezizomycotina|Rep: Protein phosphatase
ssd1 homologue, putative - Aspergillus fumigatus
(Sartorya fumigata)
Length = 1388
Score = 69.3 bits (162), Expect = 8e-11
Identities = 29/49 (59%), Positives = 38/49 (77%)
Frame = +1
Query: 100 RAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
RAKY+ A+ D++ HY LN+P+YTHFT+P RRYADI+VHR L A L+
Sbjct: 1053 RAKYYVASTVQDEQRHHYTLNLPVYTHFTNPSRRYADIIVHRQLEAVLS 1101
Score = 32.7 bits (71), Expect = 8.6
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Frame = +3
Query: 273 DDVRMI---AAQCNKQKYNAKKAGEMSTELYTLKYI-----EXNSPIVTEGAVVDIREKY 428
DDV + A CN +K +A A E S + + + E +++EG V+ + E
Sbjct: 1109 DDVESLSKTADLCNTKKDSAHNAQEQSVHIQACRSMDKKRQEIGGDLISEGIVLCVYESA 1168
Query: 429 IDVIIVSMGLNRRI 470
DV+I G +R+
Sbjct: 1169 FDVLIPEFGFEKRV 1182
>UniRef50_Q6C1S7 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 1212
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/59 (55%), Positives = 40/59 (67%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L L K M RAKY+ A DE HY LNVP+YTHF +P+RRYAD++VHR L A L+
Sbjct: 909 LETLLLKCMNRAKYYVADK--SDELAHYFLNVPVYTHFNAPLRRYADLIVHRQLKAVLS 965
>UniRef50_Q08162 Cluster: Exosome complex exonuclease RRP44; n=12;
Ascomycota|Rep: Exosome complex exonuclease RRP44 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 1001
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/64 (43%), Positives = 42/64 (65%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ ++ + M A+YF + A +F+HY L V +YTHFTSPIRRY D++ HR LA ++
Sbjct: 804 LVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSPIRRYCDVVAHRQLAGAIG 863
Query: 247 YREL 258
Y L
Sbjct: 864 YEPL 867
>UniRef50_A0BWE7 Cluster: Chromosome undetermined scaffold_131, whole
genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_131, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 1184
Score = 66.9 bits (156), Expect = 4e-10
Identities = 30/65 (46%), Positives = 42/65 (64%)
Frame = +1
Query: 64 MVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
++L K M A+YF + E++HYAL+ +YTHFTSPIRRY DI+VHR L +L
Sbjct: 975 LILGFRLLKLMEAAQYFVVDETPETEWRHYALDFDVYTHFTSPIRRYPDILVHRRLQIAL 1034
Query: 244 NYREL 258
+E+
Sbjct: 1035 EQQEI 1039
Score = 38.3 bits (85), Expect = 0.17
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +3
Query: 273 DDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVIIVSM 452
D ++ I CN + NA++ + +L+ ++ N P+ +G ++ + + I+VII
Sbjct: 1047 DKLKAIMQHCNDCRLNARRVSDQCDQLFLALLLKAN-PVEVDGYILSLNRQQIEVIIPKY 1105
Query: 453 GLNRRI 470
L R++
Sbjct: 1106 NLERKV 1111
>UniRef50_Q4T2G1 Cluster: Chromosome undetermined SCAF10273, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF10273, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1074
Score = 66.5 bits (155), Expect = 6e-10
Identities = 32/63 (50%), Positives = 45/63 (71%), Gaps = 3/63 (4%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDD--DEFQ-HYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
+L ++ M++A YF A D D++Q HY L + YTHFTSPIRRYAD++VHRLLAA
Sbjct: 764 LLRMMATSAMSQALYFSTGAQDQAQDQYQYHYGLALEKYTHFTSPIRRYADMVVHRLLAA 823
Query: 238 SLN 246
+++
Sbjct: 824 AIS 826
>UniRef50_Q00YG1 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp44/Dis3; n=2; Ostreococcus|Rep: Exosomal
3'-5' exoribonuclease complex, subunit Rrp44/Dis3 -
Ostreococcus tauri
Length = 975
Score = 66.1 bits (154), Expect = 8e-10
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+L L + M++A Y + E HY L +PLYTHFTSPIRRYAD++VHRLL+A++
Sbjct: 778 LLRLQATRCMSQAVYCSSGQYAGPERMHYGLAMPLYTHFTSPIRRYADVIVHRLLSAAI 836
>UniRef50_A7AWK8 Cluster: RNB-like domain containing protein; n=1;
Babesia bovis|Rep: RNB-like domain containing protein -
Babesia bovis
Length = 951
Score = 66.1 bits (154), Expect = 8e-10
Identities = 29/59 (49%), Positives = 42/59 (71%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L ++ + M++A Y + F+HY L+ LYTHFTSPIRRYAD++VHR+LAA+L+
Sbjct: 770 LRIMTTRCMSQAVYCHSGEAGVTSFKHYGLSSELYTHFTSPIRRYADVIVHRMLAAALD 828
>UniRef50_Q55FB1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1504
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+L L ++ A YF + + EF HY L + YTHFTSPIRRY+DI+VHR L SLN
Sbjct: 1014 ILKLKIVNVVSEAVYFSTGSVNVSEFYHYGLAIDKYTHFTSPIRRYSDIIVHRQLWNSLN 1073
Query: 247 YRELQHGRK 273
+ G K
Sbjct: 1074 QSNGKFGGK 1082
>UniRef50_A3FQ82 Cluster: Mitotic control protein dis3, putative; n=3;
Cryptosporidium|Rep: Mitotic control protein dis3,
putative - Cryptosporidium parvum Iowa II
Length = 922
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/64 (48%), Positives = 41/64 (64%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ +L + M +A YF + F HY L +YTHFTSPIRRYADI+VHRLL+AS+
Sbjct: 848 LVRILTTRTMNQALYFTTCKSVEGTF-HYGLAEEIYTHFTSPIRRYADIIVHRLLSASIG 906
Query: 247 YREL 258
L
Sbjct: 907 LEPL 910
>UniRef50_UPI00006CBEC4 Cluster: RNB-like protein; n=1; Tetrahymena
thermophila SB210|Rep: RNB-like protein - Tetrahymena
thermophila SB210
Length = 1250
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/54 (48%), Positives = 39/54 (72%)
Frame = +1
Query: 94 MTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRE 255
+ +A YF A E++H+ALN +YTHFTSPIRRY D++VHR++ + L Y++
Sbjct: 1046 LEQALYFVADQLPPSEWKHFALNFDVYTHFTSPIRRYPDLLVHRVMYSILQYKQ 1099
>UniRef50_Q17632 Cluster: Probable exosome complex exonuclease
RRP44; n=2; Caenorhabditis|Rep: Probable exosome complex
exonuclease RRP44 - Caenorhabditis elegans
Length = 1029
Score = 63.7 bits (148), Expect = 4e-09
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 115 CAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHG 267
C ++QH+ L +YTHFTSPIRRYAD++VHRLLAA++ ++Q G
Sbjct: 835 CLGTVPVPQYQHFGLACAIYTHFTSPIRRYADVIVHRLLAAAIGADDIQSG 885
>UniRef50_O14040 Cluster: Ribonuclease II (RNB) family; n=2;
Schizosaccharomyces pombe|Rep: Ribonuclease II (RNB)
family - Schizosaccharomyces pombe (Fission yeast)
Length = 927
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +1
Query: 79 LCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+ + + RA+YFC + ++ HYAL+ YTHFTSPIRRY DI+VHRLL SL
Sbjct: 730 MAVRSLNRAEYFCTGDFGEKTDWHHYALSFNHYTHFTSPIRRYPDIIVHRLLERSL 785
>UniRef50_Q7RID0 Cluster: RNB-like protein, putative; n=8; Plasmodium
(Vinckeia)|Rep: RNB-like protein, putative - Plasmodium
yoelii yoelii
Length = 2804
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 5/71 (7%)
Frame = +1
Query: 49 DKGRAMVLNLLCA---KPMTRAKYFCAAACDDDEFQ--HYALNVPLYTHFTSPIRRYADI 213
+K + + +CA K M RA+Y D++ HYAL+ LYTHFTSPIRRY DI
Sbjct: 2500 NKTKKSIFETVCAFVKKKMVRAEYHTYKYIKDNDMSTYHYALSFLLYTHFTSPIRRYPDI 2559
Query: 214 MVHRLLAASLN 246
+VHR++ +N
Sbjct: 2560 LVHRIIKRIIN 2570
>UniRef50_Q00VG4 Cluster: Exosomal 3'-5' exoribonuclease complex,
subunit Rrp44/Dis3; n=3; Ostreococcus|Rep: Exosomal
3'-5' exoribonuclease complex, subunit Rrp44/Dis3 -
Ostreococcus tauri
Length = 1157
Score = 60.1 bits (139), Expect = 5e-08
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Frame = +1
Query: 79 LCAKPMTRAKYFCAAACDDDE--FQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYR 252
L + M+ A+Y + + E F HY L + YTHFTSPIRRYADI+VHR L A++
Sbjct: 482 LATRAMSEAQYVSSGSISATESSFGHYGLALTYYTHFTSPIRRYADIVVHRQLIAAVEAT 541
Query: 253 ELQ 261
E++
Sbjct: 542 EME 544
>UniRef50_Q8SW47 Cluster: Similarity to DIS3 PROTEIN; n=1;
Encephalitozoon cuniculi|Rep: Similarity to DIS3 PROTEIN
- Encephalitozoon cuniculi
Length = 835
Score = 56.8 bits (131), Expect = 5e-07
Identities = 29/74 (39%), Positives = 41/74 (55%)
Frame = +1
Query: 10 NSARAXYVGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTS 189
+S RA + + R + + + M +A Y + + HY L P+YTHFTS
Sbjct: 623 SSPRALSESLEKMEGVRKDLAKRMLIRSMNQAVYVVSG--ETPSLHHYGLATPIYTHFTS 680
Query: 190 PIRRYADIMVHRLL 231
PIRRYADI+VHR+L
Sbjct: 681 PIRRYADIIVHRIL 694
>UniRef50_Q6MQN7 Cluster: Ribonuclease R; n=1; Bdellovibrio
bacteriovorus|Rep: Ribonuclease R - Bdellovibrio
bacteriovorus
Length = 858
Score = 56.0 bits (129), Expect = 8e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +1
Query: 61 AMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A +LN+L + M++AKY + + H+ L YTHFTSPIRRY D++VHRLL
Sbjct: 453 AQILNILTLRSMSQAKY------NMNNVGHFGLGFEFYTHFTSPIRRYPDLIVHRLL 503
>UniRef50_Q4YNU8 Cluster: Mitotic control protein dis3 homologue,
putative; n=9; Plasmodium|Rep: Mitotic control protein
dis3 homologue, putative - Plasmodium berghei
Length = 1015
Score = 55.6 bits (128), Expect = 1e-06
Identities = 29/62 (46%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAAC-DDDEFQHYALNVPLYTHFTSPIRRYADIMVHR 225
DK + +L L K M A + ++D +HY L +YT FTSPIRRYADIMVHR
Sbjct: 813 DKILSNILKTLVTKCMNEAIFISGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHR 872
Query: 226 LL 231
+L
Sbjct: 873 IL 874
>UniRef50_Q384J0 Cluster: Exosome complex exonuclease RRP44,
putative; n=3; Trypanosoma|Rep: Exosome complex
exonuclease RRP44, putative - Trypanosoma brucei
Length = 895
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGR 270
HYAL + YTHFTSPIRRYADI+VHR L +L + G+
Sbjct: 623 HYALGLEWYTHFTSPIRRYADIIVHRQLLCALEIESIVKGK 663
>UniRef50_O32231 Cluster: Ribonuclease R; n=63; Firmicutes|Rep:
Ribonuclease R - Bacillus subtilis
Length = 779
Score = 55.2 bits (127), Expect = 1e-06
Identities = 29/94 (30%), Positives = 50/94 (53%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D+ V++ + + M +AKY D H+ L+ YTHFTSPIRRY D++VHRL
Sbjct: 518 DRPEETVISTVMLRSMKQAKY------DPQSLGHFGLSTEFYTHFTSPIRRYPDLIVHRL 571
Query: 229 LAASLNYRELQHGRKMMYA**LLNVTNRSTMLKR 330
+ L ++ + +A L ++ ++ ++R
Sbjct: 572 IRTYLINGKVDEATQEKWAERLPDIAEHTSSMER 605
>UniRef50_Q8IDB6 Cluster: Mitotic control protein dis3 homologue,
putative; n=1; Plasmodium falciparum 3D7|Rep: Mitotic
control protein dis3 homologue, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1062
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAAC-DDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+L ++ K M A + ++D +HY L +YT FTSPIRRYADIMVHR+L
Sbjct: 877 ILKVMVTKCMNEAVFISGYNVHNNDMLRHYGLAADIYTFFTSPIRRYADIMVHRILNHIY 936
Query: 244 NYREL 258
EL
Sbjct: 937 QIEEL 941
>UniRef50_Q4Q8M6 Cluster: Ribonuclease II-like protein, putative;
n=4; Leishmania|Rep: Ribonuclease II-like protein,
putative - Leishmania major
Length = 942
Score = 54.8 bits (126), Expect = 2e-06
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1
Query: 103 AKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKM 276
A+Y + D H+A+ P YTHFTSPIRRY D+MVHR L +L +M
Sbjct: 620 AEYIANDPTEKDIRSHFAVAAPWYTHFTSPIRRYCDLMVHRQLRVALELERCMEEAQM 677
>UniRef50_O67834 Cluster: Ribonuclease R; n=2; Aquifex aeolicus|Rep:
Ribonuclease R - Aquifex aeolicus
Length = 705
Score = 54.0 bits (124), Expect = 3e-06
Identities = 28/72 (38%), Positives = 39/72 (54%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ L + M RAKY H+ L + Y HFTSPIRRY DI+VHRLL +L
Sbjct: 514 LVRFLTLRAMARAKY------SPHNVGHFGLALEHYAHFTSPIRRYPDIIVHRLLKKALR 567
Query: 247 YRELQHGRKMMY 282
E+ + + + Y
Sbjct: 568 GEEIDYEKTLAY 579
>UniRef50_A4EAC1 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 711
Score = 53.6 bits (123), Expect = 4e-06
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H+AL P Y HFTSPIRRY D++VHR+L L Y +L
Sbjct: 534 HFALAAPCYCHFTSPIRRYPDLVVHRVLKLQLAYEQL 570
>UniRef50_A7RTS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella vectensis
Length = 2837
Score = 53.6 bits (123), Expect = 4e-06
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +1
Query: 43 NTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVH 222
+TD GRA+ + + R++Y ++ + H+ L + YTHFTSP+RRY DI+V
Sbjct: 1876 DTD-GRALEAHCRLSSLQERSQYVLSSKVGPAGYGHFTLGLDAYTHFTSPLRRYFDIVVQ 1934
Query: 223 RLLAASLNYRELQH 264
R+L A + EL +
Sbjct: 1935 RMLVAVMLDEELPY 1948
>UniRef50_UPI0000E47D08 Cluster: PREDICTED: similar to PPAR-alpha
interacting complex protein 285; n=8; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to PPAR-alpha
interacting complex protein 285 - Strongylocentrotus
purpuratus
Length = 3249
Score = 53.2 bits (122), Expect = 6e-06
Identities = 24/55 (43%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +1
Query: 82 CAKPMTRAKYFCAAA-CDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
C M A+Y + + ++ +HY+L + YTHFTSPIRRY D++VHR+L A +
Sbjct: 2254 CYDIMESAEYIDSTSQTKPEKREHYSLQMRAYTHFTSPIRRYIDLVVHRMLVACI 2308
>UniRef50_Q9A5J4 Cluster: Exoribonuclease, VacB and RNase II family;
n=2; Alphaproteobacteria|Rep: Exoribonuclease, VacB and
RNase II family - Caulobacter crescentus (Caulobacter
vibrioides)
Length = 760
Score = 52.8 bits (121), Expect = 8e-06
Identities = 28/79 (35%), Positives = 42/79 (53%)
Frame = +1
Query: 7 PNSARAXYVGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFT 186
P +AR + + + A ++N + + +A Y D H+ LN+ Y HFT
Sbjct: 518 PQTARFNKLLEETRESPNAAIINEVVLRTQMQAHYSA------DNIGHFGLNLAKYAHFT 571
Query: 187 SPIRRYADIMVHRLLAASL 243
SPIRRYAD++VHR L +L
Sbjct: 572 SPIRRYADLIVHRGLIRAL 590
>UniRef50_Q88YG8 Cluster: Ribonuclease R; n=11; Lactobacillales|Rep:
Ribonuclease R - Lactobacillus plantarum
Length = 811
Score = 52.8 bits (121), Expect = 8e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K +++++ + M +A+Y D H+ L P YTHFTSPIRRY D+MVHRL+
Sbjct: 527 KPEEAMVSVMMLRSMKQARYA------DQSLGHFGLAAPYYTHFTSPIRRYPDMMVHRLI 580
>UniRef50_Q6ALZ0 Cluster: Related to ribonuclease R; n=1;
Desulfotalea psychrophila|Rep: Related to ribonuclease R
- Desulfotalea psychrophila
Length = 721
Score = 52.4 bits (120), Expect = 1e-05
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 7 PNSARAXYVGPDNTDKG--RAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTH 180
P+++ A + KG + V+N L + M +AKY D H+ L YTH
Sbjct: 518 PDNSPAWFGRVIEESKGSEKEFVVNNLLLRSMKQAKYSA------DNVGHFGLAATDYTH 571
Query: 181 FTSPIRRYADIMVHRLLAASLNY 249
FTSPIRRY D+MVHR L + Y
Sbjct: 572 FTSPIRRYPDLMVHRELCRLVGY 594
>UniRef50_Q11IM6 Cluster: Ribonuclease R; n=2;
Alphaproteobacteria|Rep: Ribonuclease R - Mesorhizobium
sp. (strain BNC1)
Length = 765
Score = 52.4 bits (120), Expect = 1e-05
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
H+ LN+ Y HFTSPIRRYAD++VHR L ++N+
Sbjct: 566 HFGLNLRRYAHFTSPIRRYADLIVHRALITAMNF 599
>UniRef50_Q01VX0 Cluster: Ribonuclease R; n=1; Solibacter usitatus
Ellin6076|Rep: Ribonuclease R - Solibacter usitatus
(strain Ellin6076)
Length = 762
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/64 (42%), Positives = 37/64 (57%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K +L+ L + + +A+Y + H+AL YTHFTSPIRRY D++VHRLL
Sbjct: 564 KPEERILSFLMLRSLRQARY------STENTGHFALAADTYTHFTSPIRRYPDLIVHRLL 617
Query: 232 AASL 243
A L
Sbjct: 618 RAVL 621
>UniRef50_A6GC79 Cluster: Ribonuclease R; n=1; Plesiocystis pacifica
SIR-1|Rep: Ribonuclease R - Plesiocystis pacifica SIR-1
Length = 660
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/62 (43%), Positives = 36/62 (58%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K A LN+L + M +A+Y + H+AL P Y HFTSPIRRY D++ HR+L
Sbjct: 457 KSFASALNMLMLRAMAQAQYAV------ENVGHFALASPAYVHFTSPIRRYPDLISHRVL 510
Query: 232 AA 237
A
Sbjct: 511 KA 512
>UniRef50_Q5FLT5 Cluster: Ribonuclease R; n=3; Lactobacillus|Rep:
Ribonuclease R - Lactobacillus acidophilus
Length = 782
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/57 (40%), Positives = 36/57 (63%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
V+ ++ + + +A+Y +D H+ L YTHFTSPIRRY+D+MVHR++ A
Sbjct: 538 VVQMMMLRSLKQARY------SEDALGHFGLAAEYYTHFTSPIRRYSDLMVHRMIHA 588
>UniRef50_Q5CV75 Cluster: Ssd1p/F48E8.6-like RNAseII; n=2;
Cryptosporidium|Rep: Ssd1p/F48E8.6-like RNAseII -
Cryptosporidium parvum Iowa II
Length = 1031
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRK 273
H+ALN+ LYTHFTSPIRR ADI+VH+++ L+ E + +K
Sbjct: 772 HFALNMNLYTHFTSPIRRAADILVHQMVYDILDNMEKRPDKK 813
>UniRef50_Q4T9U5 Cluster: Chromosome undetermined SCAF7493, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF7493, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 2483
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQH 264
HY+LNVP+YT TSPIRRY DI++ RLL A ++ +Q+
Sbjct: 1765 HYSLNVPIYTQATSPIRRYMDIVLQRLLHAFISGSHVQY 1803
>UniRef50_Q8PZF0 Cluster: Exoribonuclease II; n=1; Methanosarcina
mazei|Rep: Exoribonuclease II - Methanosarcina mazei
(Methanosarcina frisia)
Length = 605
Score = 51.2 bits (117), Expect = 2e-05
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA 285
H+ LN+ YTHFTSPIRRYAD++ H+ + A + L H ++ + A
Sbjct: 275 HFGLNLGAYTHFTSPIRRYADLVNHQQIRAYIRKEPLPHSKEEIQA 320
>UniRef50_Q8XKU6 Cluster: Ribonuclease R; n=11; Firmicutes|Rep:
Ribonuclease R - Clostridium perfringens
Length = 751
Score = 50.8 bits (116), Expect = 3e-05
Identities = 25/65 (38%), Positives = 35/65 (53%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K MV+N L + M +A+Y D H+ L Y HFTSPIRRY D+ +HR++
Sbjct: 516 KNEEMVINTLLLRSMMQARY------SPDCAGHFGLAAEYYCHFTSPIRRYPDLQIHRII 569
Query: 232 AASLN 246
+N
Sbjct: 570 KEYIN 574
>UniRef50_Q1VM63 Cluster: Ribonuclease R; n=1; Psychroflexus torquis
ATCC 700755|Rep: Ribonuclease R - Psychroflexus torquis
ATCC 700755
Length = 286
Score = 50.8 bits (116), Expect = 3e-05
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A + D +HYALN Y+HFTSPIRRY D++VHR +
Sbjct: 103 ATYEADVAEHYALNYAHYSHFTSPIRRYPDLLVHRAI 139
>UniRef50_Q14Q19 Cluster: Probable ribonuclease r protein; n=1;
Spiroplasma citri|Rep: Probable ribonuclease r protein -
Spiroplasma citri
Length = 705
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/61 (45%), Positives = 35/61 (57%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
DK V++ L + M +AKY D H+ L YTHFTSPIRRY D++VHRL
Sbjct: 514 DKENFKVISALVLRSMEKAKY------SDINDGHFGLASWCYTHFTSPIRRYPDLVVHRL 567
Query: 229 L 231
L
Sbjct: 568 L 568
>UniRef50_O84402 Cluster: Ribonuclease R; n=8; Chlamydiaceae|Rep:
Ribonuclease R - Chlamydia trachomatis
Length = 694
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRE 255
HY L + YTHFTSPIRRY D++VHRLL L+ E
Sbjct: 494 HYGLCLDYYTHFTSPIRRYVDLIVHRLLFHPLSVEE 529
>UniRef50_Q7VIS0 Cluster: Putative uncharacterized protein; n=1;
Helicobacter hepaticus|Rep: Putative uncharacterized
protein - Helicobacter hepaticus
Length = 614
Score = 50.4 bits (115), Expect = 4e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Frame = +1
Query: 106 KYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
K F A H+ L YTHFTSPIRRY+D++VHR+L A L+
Sbjct: 456 KSFAKATYSVINIGHFGLGFESYTHFTSPIRRYSDLIVHRILKALLH 502
>UniRef50_Q6F1Q7 Cluster: Virulence associated protein, ribonuclease
R; n=3; Mollicutes|Rep: Virulence associated protein,
ribonuclease R - Mesoplasma florum (Acholeplasma florum)
Length = 704
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
+LNL + M +AKY + + H+ L+ YTHFTSPIRRY+D++VHR L
Sbjct: 521 LLNLSLLRYMAKAKY------ELENIGHFGLSSKCYTHFTSPIRRYSDLIVHRYL 569
>UniRef50_Q30T59 Cluster: Exoribonuclease II; n=1; Thiomicrospira
denitrificans ATCC 33889|Rep: Exoribonuclease II -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 649
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
H+ L YTHFTSPIRRY+D++VHRLL A N+
Sbjct: 502 HFGLGFDEYTHFTSPIRRYSDLIVHRLLKAISNH 535
>UniRef50_Q2AEI5 Cluster: 3'-5' exoribonuclease, VacB and RNase
II:Ribonuclease R; n=3; Clostridia|Rep: 3'-5'
exoribonuclease, VacB and RNase II:Ribonuclease R -
Halothermothrix orenii H 168
Length = 706
Score = 50.4 bits (115), Expect = 4e-05
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA**LLN 300
A D H+ L + YTHFTSPIRRY D+M+HR++ + L R+ L
Sbjct: 533 AVYSDQNIGHFGLALDYYTHFTSPIRRYPDLMIHRIIKEVIKKGYLPARRQEELEEKLFE 592
Query: 301 VTNRSTMLKR 330
V S++ +R
Sbjct: 593 VAEHSSLQER 602
>UniRef50_Q1MQS9 Cluster: Exoribonuclease R; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Exoribonuclease R -
Lawsonia intracellularis (strain PHE/MN1-00)
Length = 813
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +1
Query: 58 RAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
+ +++ + + M +AKY + +H+ L PLY HFTSPIRRYAD++VHR +
Sbjct: 580 QTFLISRMVLRSMMQAKY------SPEPGEHFGLASPLYCHFTSPIRRYADLLVHRAVKF 633
Query: 238 SL 243
+L
Sbjct: 634 AL 635
>UniRef50_Q1DGB6 Cluster: 3'-5' exoribonuclease, VacB/RNase II
family; n=2; Cystobacterineae|Rep: 3'-5'
exoribonuclease, VacB/RNase II family - Myxococcus
xanthus (strain DK 1622)
Length = 631
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYR 252
H+ L PLY HFTSPIRRYAD+ VHR L L R
Sbjct: 472 HFGLAAPLYLHFTSPIRRYADLAVHRTLKGYLRGR 506
>UniRef50_Q0BU01 Cluster: Ribonuclease R; n=1; Granulibacter
bethesdensis CGDNIH1|Rep: Ribonuclease R - Granulobacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1)
Length = 812
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A + D H+ L + Y HFTSPIRRYAD++VHR L A L
Sbjct: 605 AEYNPDNIGHFGLALSRYAHFTSPIRRYADLLVHRALIAGL 645
>UniRef50_Q0AQ64 Cluster: Ribonuclease R; n=3; Rhodobacterales|Rep:
Ribonuclease R - Maricaulis maris (strain MCS10)
Length = 754
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A D + H+ LN+ Y HFTSPIRRYAD+ VHR L +L
Sbjct: 547 AVYDTENEGHFGLNLQRYAHFTSPIRRYADLTVHRALIRAL 587
>UniRef50_A6DBI2 Cluster: RNB-like protein; n=1; Caminibacter
mediatlanticus TB-2|Rep: RNB-like protein - Caminibacter
mediatlanticus TB-2
Length = 650
Score = 50.4 bits (115), Expect = 4e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRE 255
H+AL YTHFTSPIRRY+D+ +HRLL A++ ++
Sbjct: 505 HFALGFDRYTHFTSPIRRYSDLTLHRLLKATIKNQQ 540
>UniRef50_Q8EW72 Cluster: 3'-5' exoribonuclease RNase R; n=1;
Mycoplasma penetrans|Rep: 3'-5' exoribonuclease RNase R
- Mycoplasma penetrans
Length = 727
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
++N++ + M +AKY A H+ L++ YTHFTSPIRR AD++VH LL
Sbjct: 538 LINMILLRTMAKAKYQTA------NLGHFGLSISNYTHFTSPIRRLADVIVHYLL 586
>UniRef50_Q7NB22 Cluster: VacB; n=1; Mycoplasma gallisepticum|Rep:
VacB - Mycoplasma gallisepticum
Length = 707
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
+N D + ++N L + M +A Y + +H++L YTHFTSPIRRYAD +V
Sbjct: 523 NNADHKQIKLINKLLLRSMNKAYYSV------ENTRHFSLASKHYTHFTSPIRRYADNIV 576
Query: 220 HRLL 231
HR+L
Sbjct: 577 HRIL 580
>UniRef50_Q7P474 Cluster: Exoribonuclease II; n=3; Fusobacterium
nucleatum|Rep: Exoribonuclease II - Fusobacterium
nucleatum subsp. vincentii ATCC 49256
Length = 701
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/37 (54%), Positives = 29/37 (78%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
++ H+ L YTHFTSPIRRYAD+MVHR+L ++++
Sbjct: 536 EDIGHFGLASSHYTHFTSPIRRYADLMVHRVLFSTID 572
>UniRef50_A6NVY9 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 710
Score = 50.0 bits (114), Expect = 5e-05
Identities = 25/68 (36%), Positives = 36/68 (52%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
D K A +++ + + + +A+Y D H+ L Y HFTSPIRRY D+MV
Sbjct: 452 DTKGKPEAPIISTMVLRSLMKARY------DVQNLGHFGLAAKYYCHFTSPIRRYPDLMV 505
Query: 220 HRLLAASL 243
HR+L L
Sbjct: 506 HRVLTQVL 513
>UniRef50_A6BJ76 Cluster: Putative uncharacterized protein; n=2;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 741
Score = 50.0 bits (114), Expect = 5e-05
Identities = 31/94 (32%), Positives = 49/94 (52%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D +++ L + M +AKY ++D H+ L YTHFTSPIRRY D+ +HR+
Sbjct: 542 DTPEEAMISRLALRSMKQAKY----TAENDG--HFGLAANYYTHFTSPIRRYPDLQIHRI 595
Query: 229 LAASLNYRELQHGRKMMYA**LLNVTNRSTMLKR 330
+ +L R + + Y L V RS+ ++R
Sbjct: 596 IKDNLRGR-MNESKIEHYQSILPEVAKRSSEMER 628
>UniRef50_UPI0000E47E78 Cluster: PREDICTED: similar to PPAR-alpha
interacting complex protein 285; n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to PPAR-alpha
interacting complex protein 285 - Strongylocentrotus
purpuratus
Length = 3256
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +1
Query: 94 MTRAKYFCAAACDDDEFQ-HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
M A+Y + + E Q HY+L + YT FTSPIRRY D++VHR+L A +
Sbjct: 2236 MESAEYVVSTSETTPEKQEHYSLQMRAYTQFTSPIRRYIDLVVHRMLVACM 2286
>UniRef50_Q9RXG0 Cluster: Ribonuclease; n=3; Deinococcus|Rep:
Ribonuclease - Deinococcus radiodurans
Length = 760
Score = 49.6 bits (113), Expect = 7e-05
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +1
Query: 55 GRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLA 234
GR V+N L + M +AKY + H+ L Y HFTSPIRRY D++VHR L
Sbjct: 523 GRESVVNTLLLRSMQQAKYA------GENLGHFGLAFDEYLHFTSPIRRYPDLVVHRTLK 576
Query: 235 ASLN 246
L+
Sbjct: 577 KVLS 580
>UniRef50_Q3A2L6 Cluster: Exoribonuclease RNase R; n=1; Pelobacter
carbinolicus DSM 2380|Rep: Exoribonuclease RNase R -
Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
Length = 720
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D+ ++N + M +A+Y D H+ L Y HFTSPIRRY D++VHR+
Sbjct: 514 DRPEERMVNQFLLRSMKQARY------SSDNLGHFGLASDCYCHFTSPIRRYPDLVVHRI 567
Query: 229 LAASLN 246
L+ +L+
Sbjct: 568 LSRALS 573
>UniRef50_Q2RPE7 Cluster: Ribonuclease R; n=7;
Alphaproteobacteria|Rep: Ribonuclease R - Rhodospirillum
rubrum (strain ATCC 11170 / NCIB 8255)
Length = 842
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
D H+ L + Y HFTSPIRRYAD++VHR L A L
Sbjct: 600 DNIGHFGLALRRYAHFTSPIRRYADLLVHRALIAGL 635
>UniRef50_A6EL71 Cluster: Exoribonuclease II; n=15;
Bacteroidetes|Rep: Exoribonuclease II - unidentified
eubacterium SCB49
Length = 741
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
D K +++ L + M++A Y + HY L Y+HFTSPIRRY D+MV
Sbjct: 549 DVVGKKEQNLIDTLAIRSMSKAVY------TTNNIGHYGLAFDYYSHFTSPIRRYPDVMV 602
Query: 220 HRLL 231
HRLL
Sbjct: 603 HRLL 606
>UniRef50_A4YWH1 Cluster: Ribonuclease R; n=31;
Alphaproteobacteria|Rep: Ribonuclease R - Bradyrhizobium
sp. (strain ORS278)
Length = 799
Score = 49.6 bits (113), Expect = 7e-05
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A + + H+ LN+ Y HFTSPIRRYAD++VHR L +L
Sbjct: 551 AEYSSENYGHFGLNLRRYAHFTSPIRRYADLVVHRGLLRAL 591
>UniRef50_A3YBG8 Cluster: Ribonuclease R; n=1; Marinomonas sp.
MED121|Rep: Ribonuclease R - Marinomonas sp. MED121
Length = 874
Score = 49.6 bits (113), Expect = 7e-05
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A D H+ LN YTHFTSPIRRY D++VHR +
Sbjct: 561 AVYSPDNLGHFGLNYDAYTHFTSPIRRYPDLLVHRAI 597
>UniRef50_Q9CH00 Cluster: Ribonuclease R 1; n=46;
Lactobacillales|Rep: Ribonuclease R 1 - Lactococcus
lactis subsp. lactis (Streptococcus lactis)
Length = 817
Score = 49.6 bits (113), Expect = 7e-05
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1
Query: 64 MVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
MVL+ + + M +A+Y ++ H+ L YTHFTSPIRRY D++VHRL+
Sbjct: 533 MVLSTMLLRSMQQARY------SENNEGHFGLAAENYTHFTSPIRRYPDLLVHRLI 582
>UniRef50_UPI0000E4A47E Cluster: PREDICTED: similar to CG9425-PB,
partial; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to CG9425-PB, partial -
Strongylocentrotus purpuratus
Length = 3748
Score = 49.2 bits (112), Expect = 9e-05
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 16/84 (19%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKP---------------MTRAKYFCAAACDDDEFQ-HYALNVPL 171
+NT K V+N++C P M R++Y + E + H++L +
Sbjct: 2801 ENTQKAVDKVINMVCMDPNHPLQAVALSQFHRIMERSEYVNSGDQPGPEQKAHFSLKLKA 2860
Query: 172 YTHFTSPIRRYADIMVHRLLAASL 243
Y HFTSPIRR+ D++VHR+L ASL
Sbjct: 2861 YVHFTSPIRRFIDLVVHRMLIASL 2884
>UniRef50_Q6FZS0 Cluster: Exoribonuclease, VacB and RNase II family;
n=3; Bartonella|Rep: Exoribonuclease, VacB and RNase II
family - Bartonella quintana (Rochalimaea quintana)
Length = 758
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ LN+ YTHFTSPIRRYAD+++HR L
Sbjct: 563 HFGLNLHNYTHFTSPIRRYADLIIHRAL 590
>UniRef50_Q2S2D1 Cluster: Ribonuclease R; n=1; Salinibacter ruber
DSM 13855|Rep: Ribonuclease R - Salinibacter ruber
(strain DSM 13855)
Length = 666
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/28 (71%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
HY L Y+HFTSPIRRY D+MVHRLL
Sbjct: 508 HYGLGFDYYSHFTSPIRRYPDLMVHRLL 535
>UniRef50_Q6SG71 Cluster: RNB-like family protein; n=4;
Bacteria|Rep: RNB-like family protein - uncultured
bacterium 562
Length = 495
Score = 49.2 bits (112), Expect = 9e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 139 EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
E H+ L + Y+HFTSPIRRY D+M HRL+ LN +L
Sbjct: 327 EVGHFGLQLERYSHFTSPIRRYPDLMTHRLIKNILNKGDL 366
>UniRef50_Q28VI9 Cluster: Ribonuclease R; n=27;
Alphaproteobacteria|Rep: Ribonuclease R - Jannaschia sp.
(strain CCS1)
Length = 778
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/35 (57%), Positives = 26/35 (74%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAAS 240
+ F H+ L + Y HFTSPIRRYAD++VHR L A+
Sbjct: 557 ENFGHFGLALKSYAHFTSPIRRYADLIVHRALIAA 591
>UniRef50_A6VV57 Cluster: Ribonuclease R; n=1; Marinomonas sp.
MWYL1|Rep: Ribonuclease R - Marinomonas sp. MWYL1
Length = 880
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
D H+ LN YTHFTSPIRRY D++VHR +
Sbjct: 580 DNLGHFGLNYEAYTHFTSPIRRYPDLLVHRAI 611
>UniRef50_A6CFY5 Cluster: Ribonuclease R; n=1; Planctomyces maris
DSM 8797|Rep: Ribonuclease R - Planctomyces maris DSM
8797
Length = 758
Score = 49.2 bits (112), Expect = 9e-05
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 133 DDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
D E HYAL V Y HFTSPIRRY D+ +HR++
Sbjct: 544 DKELGHYALAVDHYCHFTSPIRRYPDLTIHRMI 576
>UniRef50_A1AWH7 Cluster: Ribonuclease R; n=2; sulfur-oxidizing
symbionts|Rep: Ribonuclease R - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 705
Score = 49.2 bits (112), Expect = 9e-05
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA**LLNVTNR 312
H+ L YTHFTSPIRRY D++VHR + L+ + + +KM+ L++T R
Sbjct: 546 HFGLAFENYTHFTSPIRRYPDLLVHRAIKRVLDKKSRKPSKKMLEIGAHLSMTER 600
>UniRef50_Q3SL56 Cluster: Exoribonuclease II; n=1; Thiobacillus
denitrificans ATCC 25259|Rep: Exoribonuclease II -
Thiobacillus denitrificans (strain ATCC 25259)
Length = 758
Score = 48.8 bits (111), Expect = 1e-04
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
D H+ L YTHFTSPIRRY D++VHR + A LN +L
Sbjct: 568 DNKGHFGLAYEAYTHFTSPIRRYPDLLVHRGIKAVLNGEKL 608
>UniRef50_Q3IK27 Cluster: Cold-shock RNAse R; n=13;
Gammaproteobacteria|Rep: Cold-shock RNAse R -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 749
Score = 48.8 bits (111), Expect = 1e-04
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA**LLNV-TNRSTML 324
H+ L Y HFTSPIRRYAD++ HR + A + ++ Q+G + + LNV N+++ +
Sbjct: 559 HFGLAYDAYAHFTSPIRRYADLVTHRAIRAKIQAKQ-QNGLQRAIS--FLNVFANKASSV 615
Query: 325 KRLVK 339
+L K
Sbjct: 616 SKLAK 620
>UniRef50_Q1Q6K5 Cluster: Similar to ribonuclease R; n=1; Candidatus
Kuenenia stuttgartiensis|Rep: Similar to ribonuclease R
- Candidatus Kuenenia stuttgartiensis
Length = 730
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K A ++NL+ K M +A Y E H+AL + Y HFTSPIRRY D+++HR L
Sbjct: 518 KPEAHMVNLVLLKSMKQAVYSAT------ESGHFALALENYAHFTSPIRRYPDLIIHRTL 571
>UniRef50_Q1NL99 Cluster: 3'-5' exoribonuclease, VacB and RNase
II:Ribonuclease R; n=1; delta proteobacterium
MLMS-1|Rep: 3'-5' exoribonuclease, VacB and RNase
II:Ribonuclease R - delta proteobacterium MLMS-1
Length = 782
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLA 234
H+ L YTHFTSPIRRY D+MVHR+LA
Sbjct: 610 HFGLAATHYTHFTSPIRRYPDLMVHRILA 638
>UniRef50_Q1AVL2 Cluster: Exoribonuclease II; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Exoribonuclease II -
Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 535
Score = 48.8 bits (111), Expect = 1e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
HY L + YTHFTSPIRRYAD++VHR L
Sbjct: 382 HYGLALEDYTHFTSPIRRYADVLVHRAL 409
>UniRef50_A7AQY3 Cluster: RNB-like protein; n=1; Babesia bovis|Rep:
RNB-like protein - Babesia bovis
Length = 983
Score = 48.8 bits (111), Expect = 1e-04
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMM 279
H+ L +P+Y HFTSPIRRY+D+ HR+L + ++ + K++
Sbjct: 746 HWGLALPMYLHFTSPIRRYSDLYTHRMLKSVISNTHCEQSLKVL 789
>UniRef50_Q6MCC7 Cluster: Putative ribonuclease R; n=1; Candidatus
Protochlamydia amoebophila UWE25|Rep: Putative
ribonuclease R - Protochlamydia amoebophila (strain
UWE25)
Length = 775
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
AA + HY L++ Y HFTSPIRRY D++VHR+L
Sbjct: 556 AAYSAENIGHYGLSLTHYCHFTSPIRRYVDLVVHRIL 592
>UniRef50_A0Y7J7 Cluster: Ribonuclease R; n=1; marine gamma
proteobacterium HTCC2143|Rep: Ribonuclease R - marine
gamma proteobacterium HTCC2143
Length = 821
Score = 48.4 bits (110), Expect = 2e-04
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A + H+ LN P Y HFTSPIRRY D++VHR +
Sbjct: 555 AVYQPENLGHFGLNYPAYGHFTSPIRRYPDLLVHRAI 591
>UniRef50_Q67SL9 Cluster: Ribonulease R; n=7; Firmicutes|Rep:
Ribonulease R - Symbiobacterium thermophilum
Length = 834
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
A ++ H+ L Y HFTSPIRRY D++VHR+L A L +
Sbjct: 533 ARYSEERLGHFGLAAEYYCHFTSPIRRYPDLVVHRVLRAHLQH 575
>UniRef50_Q5SJU8 Cluster: Exoribonuclease; n=2; Thermus
thermophilus|Rep: Exoribonuclease - Thermus thermophilus
(strain HB8 / ATCC 27634 / DSM 579)
Length = 744
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRK 273
H+ L + Y HFTSPIRRY D++VHR+L A+L R L RK
Sbjct: 516 HFGLAMEHYLHFTSPIRRYPDLVVHRVLKAALR-RTLTPARK 556
>UniRef50_Q1IJI5 Cluster: Ribonuclease R; n=1; Acidobacteria
bacterium Ellin345|Rep: Ribonuclease R - Acidobacteria
bacterium (strain Ellin345)
Length = 827
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K +L+ L + + +A+Y + H+AL YTHFTSPIRRY D++VHR+L
Sbjct: 582 KPEERILSYLMLRSLRQARY------SEKNEGHFALAATSYTHFTSPIRRYPDLIVHRIL 635
>UniRef50_Q0B076 Cluster: Exoribonuclease II; n=1; Syntrophomonas
wolfei subsp. wolfei str. Goettingen|Rep:
Exoribonuclease II - Syntrophomonas wolfei subsp. wolfei
(strain Goettingen)
Length = 705
Score = 48.0 bits (109), Expect = 2e-04
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
H+ L P Y HFTSPIRRY D++VHR+L++ L+
Sbjct: 540 HFGLASPYYCHFTSPIRRYPDLIVHRVLSSLLD 572
>UniRef50_A1K401 Cluster: Exoribonuclease II; n=32; Bacteria|Rep:
Exoribonuclease II - Azoarcus sp. (strain BH72)
Length = 993
Score = 48.0 bits (109), Expect = 2e-04
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A D H+ L YTHFTSPIRRY D++VHR + A L
Sbjct: 533 AVYSPDNVGHFGLAYEAYTHFTSPIRRYPDLLVHRAIKAVL 573
>UniRef50_P56123 Cluster: Ribonuclease R; n=4; Helicobacter|Rep:
Ribonuclease R - Helicobacter pylori (Campylobacter
pylori)
Length = 644
Score = 48.0 bits (109), Expect = 2e-04
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYR 252
H+ L YTHFTSPIRRY+D+ +HRLL L Y+
Sbjct: 497 HFGLGFASYTHFTSPIRRYSDLALHRLLKELLFYQ 531
>UniRef50_Q7MQZ6 Cluster: RIBONUCLEASE; n=2;
Epsilonproteobacteria|Rep: RIBONUCLEASE - Wolinella
succinogenes
Length = 653
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+ L Y+HFTSPIRRY+D+++HRLL A L
Sbjct: 502 HFGLGFEEYSHFTSPIRRYSDLVLHRLLKAEL 533
>UniRef50_Q6F7U9 Cluster: Exoribonuclease R; n=5; Moraxellaceae|Rep:
Exoribonuclease R - Acinetobacter sp. (strain ADP1)
Length = 817
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYR 252
HY L YTHFTSPIRRY D+++HR + A L +
Sbjct: 567 HYGLAYEAYTHFTSPIRRYPDLLLHRAIKAHLQQK 601
>UniRef50_Q4C5D6 Cluster: Exoribonuclease II; n=6;
Chroococcales|Rep: Exoribonuclease II - Crocosphaera
watsonii
Length = 633
Score = 47.6 bits (108), Expect = 3e-04
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
H+AL +P YTHFTSPIRR AD + HR+L A
Sbjct: 282 HFALALPAYTHFTSPIRRVADYVNHRILKA 311
>UniRef50_Q1K2V6 Cluster: Ribonuclease R; n=1; Desulfuromonas
acetoxidans DSM 684|Rep: Ribonuclease R - Desulfuromonas
acetoxidans DSM 684
Length = 722
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/61 (40%), Positives = 35/61 (57%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
+N + + M +A+Y D + H+ L Y HFTSPIRRY D++VHRLL L+
Sbjct: 521 VNRILLRSMKQARY------DAENSGHFGLASDAYCHFTSPIRRYPDLLVHRLLLQILDG 574
Query: 250 R 252
R
Sbjct: 575 R 575
>UniRef50_A6Q7D2 Cluster: Ribonuclease; n=1; Sulfurovum sp.
NBC37-1|Rep: Ribonuclease - Sulfurovum sp. (strain
NBC37-1)
Length = 655
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRE 255
H+ L Y+HFTSPIRRYAD+++HRL+ L E
Sbjct: 506 HFGLGFSHYSHFTSPIRRYADLILHRLIKTQLTNNE 541
>UniRef50_Q4UGX2 Cluster: Possible ribonuclease ii family protein;
n=2; Theileria|Rep: Possible ribonuclease ii family
protein - Theileria annulata
Length = 1062
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 139 EFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
E +H+ L +P+Y HFTSPIRRY D+ HR+L
Sbjct: 781 EVKHWGLALPVYLHFTSPIRRYPDLYTHRML 811
>UniRef50_Q31FJ1 Cluster: Ribonuclease R; n=1; Thiomicrospira
crunogena XCL-2|Rep: Ribonuclease R - Thiomicrospira
crunogena (strain XCL-2)
Length = 818
Score = 47.2 bits (107), Expect = 4e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A D H+ LN Y HFTSPIRRY D+++HR +
Sbjct: 584 AVYQPDNLGHFGLNYEYYAHFTSPIRRYPDLLIHRAI 620
>UniRef50_Q1D4N8 Cluster: Ribonuclease R; n=3;
Deltaproteobacteria|Rep: Ribonuclease R - Myxococcus
xanthus (strain DK 1622)
Length = 1182
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
HY L Y HFTSPIRRY D++VHRLL A
Sbjct: 638 HYGLAAEHYLHFTSPIRRYPDLLVHRLLKA 667
>UniRef50_A4IWL1 Cluster: Ribonuclease R; n=11; Francisella
tularensis|Rep: Ribonuclease R - Francisella tularensis
subsp. tularensis (strain WY96-3418)
Length = 765
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHG 267
H+ L YTHFTSPIRRY D++VHR++ + + E +HG
Sbjct: 559 HFGLAYSEYTHFTSPIRRYPDLVVHRIIKSIIG--EYEHG 596
>UniRef50_P75529 Cluster: Ribonuclease R; n=5; Mycoplasma|Rep:
Ribonuclease R - Mycoplasma pneumoniae
Length = 726
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+++ YTHFTSPIRRYAD+ VHRLL +L
Sbjct: 561 HFSIGSHHYTHFTSPIRRYADLTVHRLLWMNL 592
>UniRef50_Q8A378 Cluster: Ribonuclease R; n=9; Bacteroidales|Rep:
Ribonuclease R - Bacteroides thetaiotaomicron
Length = 718
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
HY L YTHFTSPIRR+ D+MVHRL+
Sbjct: 558 HYGLAFDYYTHFTSPIRRFPDMMVHRLV 585
>UniRef50_Q4A6A7 Cluster: VACB-like ribonuclease II; n=2; Mycoplasma
synoviae 53|Rep: VACB-like ribonuclease II - Mycoplasma
synoviae (strain 53)
Length = 735
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
+NLL + M +A Y + H+ L Y HFTSPIRRY D++VHR+L L
Sbjct: 534 INLLFLRTMQKAIYSL------NNIGHFGLASEFYCHFTSPIRRYPDLLVHRILTMHLEG 587
Query: 250 RELQ 261
+ Q
Sbjct: 588 KSSQ 591
>UniRef50_Q0EWH9 Cluster: Exoribonuclease II; n=1; Mariprofundus
ferrooxydans PV-1|Rep: Exoribonuclease II -
Mariprofundus ferrooxydans PV-1
Length = 707
Score = 46.8 bits (106), Expect = 5e-04
Identities = 27/59 (45%), Positives = 33/59 (55%)
Frame = +1
Query: 61 AMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
A VL+ L + M +AKY H+ L Y HFTSPIRRYAD++VHR L A
Sbjct: 520 AHVLHRLVLRSMQQAKYTPV------NVGHFGLAYDSYAHFTSPIRRYADLIVHRRLKA 572
>UniRef50_A5KIG0 Cluster: Putative uncharacterized protein; n=2;
Ruminococcus|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 735
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYR 252
H+ L YTHFTSPIRRY D+ +HR++ +L R
Sbjct: 573 HFGLAAKYYTHFTSPIRRYPDLQIHRIIKENLRGR 607
>UniRef50_A3ZQN3 Cluster: Ribonuclease R; n=1; Blastopirellula
marina DSM 3645|Rep: Ribonuclease R - Blastopirellula
marina DSM 3645
Length = 770
Score = 46.8 bits (106), Expect = 5e-04
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRK 273
A +E HYAL Y HFTSPIRRY D+ +HR+ Y +L G+K
Sbjct: 545 AVYSPEEIGHYALASECYCHFTSPIRRYPDLTIHRM------YNDLATGKK 589
>UniRef50_Q02146 Cluster: Ribonuclease R 2; n=3; Lactococcus
lactis|Rep: Ribonuclease R 2 - Lactococcus lactis subsp.
lactis (Streptococcus lactis)
Length = 665
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A + +H+ L YTHFTSPIRRY D+++HRLL
Sbjct: 489 AVYSEKNTKHFGLAATNYTHFTSPIRRYPDLIIHRLL 525
>UniRef50_Q74D34 Cluster: Ribonuclease R, putative; n=7;
Desulfuromonadales|Rep: Ribonuclease R, putative -
Geobacter sulfurreducens
Length = 763
Score = 46.4 bits (105), Expect = 7e-04
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +1
Query: 52 KGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
K ++N + + M +A+Y + H+ L YTHFTSPIRRY D++VHR+L
Sbjct: 514 KPEERMINEVLLRCMKQARY------SHENLGHFGLAARCYTHFTSPIRRYPDLVVHRIL 567
>UniRef50_Q29XV9 Cluster: Possible RNAase; n=17; Campylobacter|Rep:
Possible RNAase - Campylobacter jejuni
Length = 515
Score = 46.4 bits (105), Expect = 7e-04
Identities = 18/30 (60%), Positives = 24/30 (80%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
H+ L Y+HFTSPIRRY+D+++HRLL A
Sbjct: 367 HFGLGFDKYSHFTSPIRRYSDLILHRLLKA 396
>UniRef50_Q0VMF7 Cluster: Ribonuclease R; n=1; Alcanivorax
borkumensis SK2|Rep: Ribonuclease R - Alcanivorax
borkumensis (strain SK2 / ATCC 700651 / DSM 11573)
Length = 828
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
V+ + + M++AKY + + H+ L YTHFTSPIRRY D++VHR +
Sbjct: 557 VIQTMMLRTMSQAKY------EAENKGHFGLAYKAYTHFTSPIRRYPDLLVHRAI 605
>UniRef50_A7HAA8 Cluster: Ribonuclease R; n=4; cellular
organisms|Rep: Ribonuclease R - Anaeromyxobacter sp.
Fw109-5
Length = 910
Score = 46.4 bits (105), Expect = 7e-04
Identities = 28/68 (41%), Positives = 35/68 (51%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
LN L + M +A Y + HY L Y HFTSPIRRY D++VHRLL
Sbjct: 540 LNQLLLRAMMQAVYAT------ENIGHYGLAAQHYLHFTSPIRRYPDLVVHRLLKEEWAR 593
Query: 250 RELQHGRK 273
R+ Q R+
Sbjct: 594 RQGQPVRE 601
>UniRef50_A3EPY9 Cluster: Exoribonuclease R; n=1; Leptospirillum sp.
Group II UBA|Rep: Exoribonuclease R - Leptospirillum sp.
Group II UBA
Length = 744
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L + YTHFTSPIRRY D++VHRLL
Sbjct: 549 HFGLAMDDYTHFTSPIRRYPDLIVHRLL 576
>UniRef50_Q8KF23 Cluster: Ribonuclease II family protein; n=10;
Chlorobiaceae|Rep: Ribonuclease II family protein -
Chlorobium tepidum
Length = 720
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L YTHFTSPIRRY D++VHR+L
Sbjct: 552 HFGLGFEHYTHFTSPIRRYPDLIVHRIL 579
>UniRef50_Q11XW5 Cluster: Exoribonuclease II; n=5; cellular
organisms|Rep: Exoribonuclease II - Cytophaga
hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 750
Score = 46.0 bits (104), Expect = 9e-04
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
VL L + M++A Y + + D H+ L Y+HFTSPIRRY D+M HRLL
Sbjct: 546 VLQSLAIRTMSKAIY----SIEPD--MHFGLAFKHYSHFTSPIRRYPDVMAHRLL 594
>UniRef50_Q04E22 Cluster: Exoribonuclease R; n=2; Oenococcus
oeni|Rep: Exoribonuclease R - Oenococcus oeni (strain
BAA-331 / PSU-1)
Length = 726
Score = 46.0 bits (104), Expect = 9e-04
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ + YTHFTSPIRRY D++VHRL+
Sbjct: 503 HFGIAAKFYTHFTSPIRRYPDLVVHRLI 530
>UniRef50_Q7REV4 Cluster: Rhoptry protein; n=4; Plasmodium
(Vinckeia)|Rep: Rhoptry protein - Plasmodium yoelii
yoelii
Length = 1559
Score = 46.0 bits (104), Expect = 9e-04
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 130 DDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
+++ H+ LN+ Y HFTSPIRRY DI+ HR+L
Sbjct: 1052 NNENTYHFGLNLNNYIHFTSPIRRYIDIITHRIL 1085
>UniRef50_Q7UFR0 Cluster: Ribonuclease R; n=1; Pirellula sp.|Rep:
Ribonuclease R - Rhodopirellula baltica
Length = 764
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
HYAL+ Y HFTSPIRRY D+ VHRL+
Sbjct: 564 HYALDKEHYCHFTSPIRRYPDLSVHRLV 591
>UniRef50_Q39GY3 Cluster: 3'-5' exoribonuclease, VacB and RNase
II/Ribonuclease R; n=33; Burkholderiales|Rep: 3'-5'
exoribonuclease, VacB and RNase II/Ribonuclease R -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 828
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/66 (36%), Positives = 34/66 (51%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
D+ A +L + + M +A Y D H+ L Y HFTSPIRRY D++ HR
Sbjct: 520 DRPDAQMLQPMLLRSMQQAVY------SPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRA 573
Query: 229 LAASLN 246
+ A L+
Sbjct: 574 IYAILS 579
>UniRef50_Q1GTS6 Cluster: Ribonuclease R; n=8; Sphingomonadales|Rep:
Ribonuclease R - Sphingopyxis alaskensis (Sphingomonas
alaskensis)
Length = 766
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAAS 240
H+ L + Y HFTSPIRRYAD++VHR L S
Sbjct: 553 HFGLALGSYAHFTSPIRRYADLIVHRALVDS 583
>UniRef50_A6SZV8 Cluster: Exoribonuclease RNAse R; n=20;
Burkholderiales|Rep: Exoribonuclease RNAse R -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 816
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 37 PDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIM 216
P ++ A++L + + M +A Y + H+ L+ Y HFTSPIRRY D++
Sbjct: 516 PKIKNRPDALLLQTMLLRSMQQAVY------SPENIGHFGLSYEAYAHFTSPIRRYPDLL 569
Query: 217 VHRLLAASL 243
HR + A L
Sbjct: 570 THRAIKAIL 578
>UniRef50_A3VTQ9 Cluster: 3'-5' exoribonuclease, VacB and RNase
II/Ribonuclease R; n=1; Parvularcula bermudensis
HTCC2503|Rep: 3'-5' exoribonuclease, VacB and RNase
II/Ribonuclease R - Parvularcula bermudensis HTCC2503
Length = 830
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAAS 240
H+ L++ Y HFTSPIRRYAD+ +HR L ++
Sbjct: 546 HFGLSLRRYAHFTSPIRRYADLTIHRALVSA 576
>UniRef50_A1WUS9 Cluster: Ribonuclease R; n=2;
Ectothiorhodospiraceae|Rep: Ribonuclease R -
Halorhodospira halophila (strain DSM 244 / SL1)
(Ectothiorhodospirahalophila (strain DSM 244 / SL1))
Length = 842
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1
Query: 118 AAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHR 225
AA D H+ L + YTHFTSPIRRY D+++HR
Sbjct: 555 AAEYRPDNAGHFGLALEAYTHFTSPIRRYPDLVIHR 590
>UniRef50_Q9PR88 Cluster: Ribonuclease R; n=1; Ureaplasma
parvum|Rep: Ribonuclease R - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 721
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L YTHFTSPIRRY D++VHRLL
Sbjct: 555 HFGLASDNYTHFTSPIRRYPDLIVHRLL 582
>UniRef50_Q9WZI1 Cluster: Ribonuclease R; n=5; Thermotogaceae|Rep:
Ribonuclease R - Thermotoga maritima
Length = 710
Score = 45.6 bits (103), Expect = 0.001
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L YTHFTSPIRRY D++VHRLL
Sbjct: 541 HFGLASYAYTHFTSPIRRYPDLVVHRLL 568
>UniRef50_A5IXZ7 Cluster: Ribonuclease R (VacB-like (Shigella
flexneri)ribonuclease II); n=1; Mycoplasma
agalactiae|Rep: Ribonuclease R (VacB-like (Shigella
flexneri)ribonuclease II) - Mycoplasma agalactiae
Length = 729
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A D H+ L Y HFTSPIRRY D++VHR+L
Sbjct: 534 AVYSPDNIGHFGLASECYCHFTSPIRRYPDVIVHRVL 570
>UniRef50_A1VBI0 Cluster: Ribonuclease R; n=3; Desulfovibrio|Rep:
Ribonuclease R - Desulfovibrio vulgaris subsp. vulgaris
(strain DP4)
Length = 886
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+ L Y HFTSPIRRYAD++VHR L +L
Sbjct: 552 HFGLASACYCHFTSPIRRYADLVVHRALKRAL 583
>UniRef50_A4CUF3 Cluster: Exoribonuclease II; n=4;
Synechococcus|Rep: Exoribonuclease II - Synechococcus
sp. (strain WH7805)
Length = 651
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
H++L VP YT TSPIRRY D++V R AA L+
Sbjct: 504 HFSLGVPAYTQATSPIRRYGDLVVQRQFAAMLS 536
>UniRef50_A5K6D1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 1762
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLA 234
H+ L + Y HFTSPIRRY DI+ HR+LA
Sbjct: 1208 HFGLALTKYIHFTSPIRRYIDIITHRILA 1236
>UniRef50_P57628 Cluster: Ribonuclease R; n=2; Buchnera aphidicola
(Acyrthosiphon pisum)|Rep: Ribonuclease R - Buchnera
aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon
pisumsymbiotic bacterium)
Length = 731
Score = 44.8 bits (101), Expect = 0.002
Identities = 21/62 (33%), Positives = 36/62 (58%)
Frame = +1
Query: 46 TDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHR 225
+D+ ++ + + MT+A Y D H+ L++ Y HFTSPIRRY D+++HR
Sbjct: 529 SDRPEYEMIQTVLLRSMTQAVY------SPDNRGHFGLSLSSYVHFTSPIRRYPDLILHR 582
Query: 226 LL 231
++
Sbjct: 583 VI 584
>UniRef50_Q6KI25 Cluster: Vacb-like ribonuclease II; n=2; cellular
organisms|Rep: Vacb-like ribonuclease II - Mycoplasma
mobile
Length = 708
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
+ +L + M +AKY + H+ L Y HFTSPIRRY D++ HR++
Sbjct: 517 IKILILRSMQKAKY------SPNNVGHFGLGSKFYLHFTSPIRRYPDLLTHRII 564
>UniRef50_A6DIQ3 Cluster: Exoribonuclease, VacB/RNB family protein;
n=1; Lentisphaera araneosa HTCC2155|Rep:
Exoribonuclease, VacB/RNB family protein - Lentisphaera
araneosa HTCC2155
Length = 668
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H L + YT FTSPIRRY+D+M+ R L A L R+L
Sbjct: 525 HAGLGLDCYTQFTSPIRRYSDLMMQRQLIAFLEGRDL 561
>UniRef50_A5EVE2 Cluster: Ribonuclease R; n=1; Dichelobacter nodosus
VCS1703A|Rep: Ribonuclease R - Dichelobacter nodosus
(strain VCS1703A)
Length = 752
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+AL + Y HFTSPIRRY D++VHR +
Sbjct: 564 HFALALSHYAHFTSPIRRYPDLLVHRAI 591
>UniRef50_Q0GXV6 Cluster: Putative ribonuclease; n=1; Lactococcus
phage Q54|Rep: Putative ribonuclease - Lactococcus phage
Q54
Length = 528
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 115 CAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
C A + H+ + Y+HFTSPIRRY D+ +HRL+
Sbjct: 324 CQAKYGYENIGHFGIAAEAYSHFTSPIRRYPDLTLHRLI 362
>UniRef50_Q8I389 Cluster: Putative uncharacterized protein PFI0295c;
n=2; Plasmodium|Rep: Putative uncharacterized protein
PFI0295c - Plasmodium falciparum (isolate 3D7)
Length = 1807
Score = 44.0 bits (99), Expect = 0.003
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
H+ L + Y HFTSPIRRY DI++HR+L + ++
Sbjct: 1299 HFGLVLNKYIHFTSPIRRYIDIVIHRILQSLID 1331
>UniRef50_Q98QL0 Cluster: Ribonuclease R; n=1; Mycoplasma
pulmonis|Rep: Ribonuclease R - Mycoplasma pulmonis
Length = 725
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A D H+ L Y+HFTSPIRRY D+ +HRL+
Sbjct: 519 AIYSDKNIGHFGLASSYYSHFTSPIRRYPDLQLHRLI 555
>UniRef50_Q2S7B5 Cluster: Exoribonuclease R; n=1; Hahella chejuensis
KCTC 2396|Rep: Exoribonuclease R - Hahella chejuensis
(strain KCTC 2396)
Length = 657
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +1
Query: 124 ACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A D H+ + +P YT FTSPIR+Y D+ +HR + + L
Sbjct: 478 ALSDQPCPHFGMGLPHYTTFTSPIRKYVDLSIHRQIKSVL 517
>UniRef50_A4BI97 Cluster: Exoribonuclease R; n=1; Reinekea sp.
MED297|Rep: Exoribonuclease R - Reinekea sp. MED297
Length = 647
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/37 (48%), Positives = 26/37 (70%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H+ L + YT+ TSPIR+Y+D+ +HRL+ A L R L
Sbjct: 493 HFGLGLSRYTNVTSPIRKYSDLCMHRLIKAKLASRAL 529
>UniRef50_Q7R054 Cluster: GLP_56_56502_53413; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_56_56502_53413 - Giardia lamblia
ATCC 50803
Length = 1029
Score = 43.6 bits (98), Expect = 0.005
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMV 219
D + G + A + +A Y + H+ ++ LY HFTSPIRRY D +
Sbjct: 641 DGEEHGVQLANYFFLANCLQKAIYQVGSTHPFKLLTHWGIHAHLYMHFTSPIRRYPDDIA 700
Query: 220 HRLLAASL 243
HRLL L
Sbjct: 701 HRLLHLGL 708
>UniRef50_Q4XZG1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 1258
Score = 43.6 bits (98), Expect = 0.005
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L++ Y HFTSPIRRY DI+ HR+L
Sbjct: 815 HFGLSLNNYIHFTSPIRRYIDIITHRIL 842
>UniRef50_Q9PBZ8 Cluster: VacB protein; n=16; Xanthomonadaceae|Rep:
VacB protein - Xylella fastidiosa
Length = 717
Score = 43.2 bits (97), Expect = 0.006
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
H+ L + Y HFTSPIRRY D++VHR + +L+
Sbjct: 554 HFGLALDGYAHFTSPIRRYPDLLVHRAIKHALS 586
>UniRef50_O94525 Cluster: Ribonuclease II (RNB) family; n=1;
Schizosaccharomyces pombe|Rep: Ribonuclease II (RNB)
family - Schizosaccharomyces pombe (Fission yeast)
Length = 1157
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/68 (33%), Positives = 32/68 (47%)
Frame = +1
Query: 49 DKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRL 228
DK M+L L + ++Y + D H+ + P YTHF P RRY DI V R
Sbjct: 859 DKRTKMLLQLTLRRMCNESEYTIGTSNAKD-VSHFVFSCPYYTHFCHPTRRYIDICVQRQ 917
Query: 229 LAASLNYR 252
L + + R
Sbjct: 918 LREAFDGR 925
>UniRef50_Q8F9Z7 Cluster: VacB protein; n=4; Leptospira|Rep: VacB
protein - Leptospira interrogans
Length = 748
Score = 42.7 bits (96), Expect = 0.008
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = +1
Query: 40 DNTDKGRAMVLNLLCAKPMTRA------KYFCAAACDDDEFQHYALNVPLYTHFTSPIRR 201
D++ + VL L AKP R + F A + H+ L Y HFTSPIRR
Sbjct: 541 DSSYESIRSVLKELEAKPAERLFNMFLLRTFMQAYYSGEHLGHWGLGFEDYCHFTSPIRR 600
Query: 202 YADIMVHRLL 231
Y D++ HR+L
Sbjct: 601 YPDLVCHRVL 610
>UniRef50_Q4AAR6 Cluster: VACB-like ribonuclease II; n=5; Mycoplasma
hyopneumoniae|Rep: VACB-like ribonuclease II -
Mycoplasma hyopneumoniae (strain J / ATCC 25934 / NCTC
10110)
Length = 694
Score = 42.7 bits (96), Expect = 0.008
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L Y+HFTSPIRRY D+++HR++
Sbjct: 533 HFGLAANFYSHFTSPIRRYPDLILHRII 560
>UniRef50_Q46KZ5 Cluster: Exoribonuclease R/ribonuclease II; n=2;
Prochlorococcus marinus|Rep: Exoribonuclease
R/ribonuclease II - Prochlorococcus marinus (strain
NATL2A)
Length = 424
Score = 42.7 bits (96), Expect = 0.008
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 19 RAXYVGPDNTDKGRAMVL-NLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPI 195
R+ V DN +L N L K M + Y + QH +L + Y H TSPI
Sbjct: 245 RSDKVSNDNIQLSDNKILYNFLLKKTMGKTYYSI------NPMQHDSLALTSYLHATSPI 298
Query: 196 RRYADIMVHRLLAASLNYREL 258
RRYAD++VH L LN + L
Sbjct: 299 RRYADLLVHYQLNRFLNNKVL 319
>UniRef50_Q0RY19 Cluster: Exoribonuclease R; n=3; Rhodococcus sp.
RHA1|Rep: Exoribonuclease R - Rhodococcus sp. (strain
RHA1)
Length = 625
Score = 42.7 bits (96), Expect = 0.008
Identities = 19/44 (43%), Positives = 27/44 (61%)
Frame = +1
Query: 118 AAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
AA D HY L + YTH TSP+RR AD++ R++ A L++
Sbjct: 265 AATYDPTVHGHYGLRLSAYTHVTSPLRRVADLINQRIIFAHLDH 308
>UniRef50_P40611 Cluster: Ribonuclease R; n=137; Proteobacteria|Rep:
Ribonuclease R - Vibrio parahaemolyticus
Length = 835
Score = 42.7 bits (96), Expect = 0.008
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
A + D H+ L + Y HFTSPIRRY D+++HR +
Sbjct: 553 AVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAI 589
>UniRef50_A6DTA8 Cluster: Putative ribonuclease R; n=1; Lentisphaera
araneosa HTCC2155|Rep: Putative ribonuclease R -
Lentisphaera araneosa HTCC2155
Length = 754
Score = 42.3 bits (95), Expect = 0.011
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+ L LY+HFTSPIRR AD++VH+ L
Sbjct: 529 HFGLGKNLYSHFTSPIRRLADLLVHQQL 556
>UniRef50_A0Y8Y7 Cluster: Exoribonuclease R; n=1; marine gamma
proteobacterium HTCC2143|Rep: Exoribonuclease R - marine
gamma proteobacterium HTCC2143
Length = 663
Score = 42.3 bits (95), Expect = 0.011
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +1
Query: 121 AACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A + H+ + + YT FTSPIR+Y D++VHR++ L
Sbjct: 481 ARLSNKRLPHFGMGLSSYTTFTSPIRKYTDLLVHRIIKEKL 521
>UniRef50_Q1N135 Cluster: Exoribonuclease R; n=1; Oceanobacter sp.
RED65|Rep: Exoribonuclease R - Oceanobacter sp. RED65
Length = 658
Score = 41.9 bits (94), Expect = 0.014
Identities = 15/33 (45%), Positives = 24/33 (72%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
H + YT FTSPIR+Y+D+++HR++ A L+
Sbjct: 511 HMGMGFECYTTFTSPIRKYSDLLIHRIIKAHLS 543
>UniRef50_Q5V0M7 Cluster: Ribonuclease R; n=6; Halobacteriaceae|Rep:
Ribonuclease R - Haloarcula marismortui (Halobacterium
marismortui)
Length = 457
Score = 41.9 bits (94), Expect = 0.014
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +1
Query: 88 KPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVH 222
K M RAKY +D H+ALN +Y HFTSPIRR +D++ H
Sbjct: 340 KVMPRAKYM-----NDPFGGHHALNFEIYGHFTSPIRRLSDLINH 379
>UniRef50_UPI0000ECA91C Cluster: Peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein (EC
3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-
interacting complex protein 285) (PPAR-gamma
DBD-interacting protein 1) (PDIP1).; n=3; Amniota|Rep:
Peroxisomal proliferator-activated receptor A-interacting
complex 285 kDa protein (EC 3.6.1.-) (ATP-dependent
helicase PRIC285) (PPAR-alpha- interacting complex
protein 285) (PPAR-gamma DBD-interacting protein 1)
(PDIP1). - Gallus gallus
Length = 2565
Score = 41.5 bits (93), Expect = 0.019
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +1
Query: 109 YFCAA-ACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQ-HGRKMMY 282
YFC + + + HY+L V YT +SPIRRY DI+V R L + L + + + +
Sbjct: 1566 YFCRSNSTAQSKVGHYSLKVDSYTWASSPIRRYMDIVVQRHLHSVLRKKPITCSSDDIDF 1625
Query: 283 A**LLNVTN-RSTMLKRLVKCQQNCT 357
N N ++TM ++ +C Q T
Sbjct: 1626 LCHDFNKKNSKATMYEKRARCMQMAT 1651
>UniRef50_Q8YXH3 Cluster: Zam protein; n=6; Cyanobacteria|Rep: Zam
protein - Anabaena sp. (strain PCC 7120)
Length = 783
Score = 41.5 bits (93), Expect = 0.019
Identities = 18/41 (43%), Positives = 28/41 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGR 270
H+ L + YTHFT+P+RRY D+++ R+ Y+ L+HGR
Sbjct: 542 HFGLALLQYTHFTAPLRRYPDLLMQRVY-----YQLLEHGR 577
>UniRef50_Q7U6W2 Cluster: Probable ribonuclease II; n=3;
Cyanobacteria|Rep: Probable ribonuclease II -
Synechococcus sp. (strain WH8102)
Length = 682
Score = 41.5 bits (93), Expect = 0.019
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H++L + Y TSPIRRYAD++ HR L A + R +
Sbjct: 542 HFSLGLEAYVQATSPIRRYADLLAHRQLIAWIEQRSV 578
>UniRef50_A2AS03 Cluster: Novel protein (Possible orthologue of human
peroxisomal proliferator- activated receptor A
interacting complex 285 (PRIC285)); n=11;
Euteleostomi|Rep: Novel protein (Possible orthologue of
human peroxisomal proliferator- activated receptor A
interacting complex 285 (PRIC285)) - Mus musculus (Mouse)
Length = 2970
Score = 41.1 bits (92), Expect = 0.025
Identities = 17/35 (48%), Positives = 25/35 (71%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYR 252
H++L V YT TSPIRRY D+++ RL+ +L +R
Sbjct: 1891 HHSLQVDWYTWATSPIRRYLDVVLQRLILLALGHR 1925
>UniRef50_Q4D9D0 Cluster: Mitochondrial exoribonuclease DSS-1,
putative; n=1; Trypanosoma cruzi|Rep: Mitochondrial
exoribonuclease DSS-1, putative - Trypanosoma cruzi
Length = 728
Score = 40.7 bits (91), Expect = 0.033
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +1
Query: 94 MTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
+TRA YF H LN YTH TSP+RRYAD++VH L
Sbjct: 471 VTRAVYF------HTPIYHAGLNTYNYTHSTSPLRRYADMLVHHQL 510
>UniRef50_A2QYG4 Cluster: Contig An12c0030, complete genome; n=7;
Trichocomaceae|Rep: Contig An12c0030, complete genome -
Aspergillus niger
Length = 1045
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/43 (39%), Positives = 27/43 (62%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKM 276
H L + Y TSP+RRY D++ H + A+L + E +HGR++
Sbjct: 858 HTPLGLDAYVKATSPLRRYTDVLAHYQIEAALRF-EHEHGRRL 899
>UniRef50_Q9KLE1 Cluster: Exoribonuclease 2; n=37; Bacteria|Rep:
Exoribonuclease 2 - Vibrio cholerae
Length = 678
Score = 40.7 bits (91), Expect = 0.033
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +1
Query: 106 KYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
KY + + H+A+ + +Y +TSPIR+Y D++ HRLL A +
Sbjct: 476 KYQSYSEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHI 521
>UniRef50_A4HS28 Cluster: Mitochondrial exoribonuclease DSS-1,
putative; n=3; Leishmania|Rep: Mitochondrial
exoribonuclease DSS-1, putative - Leishmania infantum
Length = 854
Score = 40.3 bits (90), Expect = 0.043
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H L+ YTH TSP+RRYAD++VH L
Sbjct: 588 HAGLDTTFYTHSTSPLRRYADMLVHHQL 615
>UniRef50_A6F7X7 Cluster: Exoribonuclease II; n=1; Moritella sp.
PE36|Rep: Exoribonuclease II - Moritella sp. PE36
Length = 647
Score = 39.9 bits (89), Expect = 0.057
Identities = 16/33 (48%), Positives = 25/33 (75%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+H+A+ + Y +TSPIR+Y DI+ HRL+ A+L
Sbjct: 482 RHFAMGLDGYATWTSPIRKYGDIINHRLIKATL 514
>UniRef50_A1U792 Cluster: VacB and RNase II family 3'-5'
exoribonuclease; n=2; Marinobacter|Rep: VacB and RNase
II family 3'-5' exoribonuclease - Marinobacter aquaeolei
(strain ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 660
Score = 39.9 bits (89), Expect = 0.057
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H + + YT FTSP+R+++D VHRL+ A+L
Sbjct: 492 HQGMGLAAYTTFTSPLRKFSDFYVHRLIKAAL 523
>UniRef50_Q54N92 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1642
Score = 39.9 bits (89), Expect = 0.057
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +1
Query: 172 YTHFTSPIRRYADIMVHRLLAASL 243
YTHFT+PIRRY D+ +HR L+ L
Sbjct: 1464 YTHFTAPIRRYMDVNIHRALSLQL 1487
>UniRef50_Q9BYK8 Cluster: Peroxisomal proliferator-activated receptor
A-interacting complex 285 kDa protein; n=17;
Euarchontoglires|Rep: Peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein - Homo
sapiens (Human)
Length = 2649
Score = 39.9 bits (89), Expect = 0.057
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +1
Query: 88 KPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
K + R+ + A + HY+L V YT TSPIRRY D+++ R + +L +
Sbjct: 1640 KALERSAFGRCARGHQQQGGHYSLQVDWYTWATSPIRRYLDVVLQRQILLALGH 1693
>UniRef50_A1IC27 Cluster: Exoribonuclease II; n=1; Candidatus
Desulfococcus oleovorans Hxd3|Rep: Exoribonuclease II -
Candidatus Desulfococcus oleovorans Hxd3
Length = 666
Score = 39.5 bits (88), Expect = 0.075
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +1
Query: 106 KYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN----YRE--LQHG 267
K D +H L V LYT TSPIR+YAD++ R + A+L Y E LQH
Sbjct: 514 KMVARVVVDTKPERHCGLGVDLYTSATSPIRKYADLITQRQVRAALGLETPYTEDQLQHL 573
Query: 268 RKMM 279
+M+
Sbjct: 574 MQML 577
>UniRef50_A1AXH8 Cluster: Ribonuclease II; n=2; sulfur-oxidizing
symbionts|Rep: Ribonuclease II - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 601
Score = 39.5 bits (88), Expect = 0.075
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +1
Query: 106 KYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLA 234
K+F +A H+ L + +Y TSP+RRY D++ H+ L+
Sbjct: 451 KFFRHSAISTKNLPHFGLGLKVYLRITSPLRRYLDLLAHQQLS 493
>UniRef50_A5GTC0 Cluster: Exoribonuclease R/ribonuclease II; n=1;
Synechococcus sp. RCC307|Rep: Exoribonuclease
R/ribonuclease II - Synechococcus sp. (strain RCC307)
Length = 655
Score = 39.1 bits (87), Expect = 0.099
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHR 225
H +L +P+Y +TSPIRRY D++ HR
Sbjct: 511 HGSLGLPMYLQWTSPIRRYGDLLAHR 536
>UniRef50_Q38EM3 Cluster: Mitochondrial exoribonuclease DSS-1; n=2;
Trypanosoma brucei|Rep: Mitochondrial exoribonuclease
DSS-1 - Trypanosoma brucei
Length = 743
Score = 39.1 bits (87), Expect = 0.099
Identities = 21/46 (45%), Positives = 26/46 (56%)
Frame = +1
Query: 94 MTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLL 231
+TRA YF H L+ YTH TSP+RRYAD++VH L
Sbjct: 498 VTRAVYF------HTPIYHAGLDTHNYTHSTSPLRRYADMLVHHQL 537
>UniRef50_P47950 Cluster: Mitochondrial protein cyt-4; n=1; Neurospora
crassa|Rep: Mitochondrial protein cyt-4 - Neurospora
crassa
Length = 1117
Score = 39.1 bits (87), Expect = 0.099
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +1
Query: 151 YALNVPLYTHFTSPIRRYADIMVHRLLAASL--NYRELQHGRKMM 279
Y + V +YT TSP+RRY+D++VH + A+L ++ L G + +
Sbjct: 886 YTMGVDIYTKATSPLRRYSDLLVHWQIQAALLEEHKRLAQGSQSL 930
>UniRef50_Q5SI46 Cluster: Ribonuclease II family protein; n=3;
Deinococci|Rep: Ribonuclease II family protein - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 598
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H L +PLY TSP+RRY D++ H+ L A L
Sbjct: 463 HKGLGLPLYAQVTSPLRRYLDLVAHQQLRAWL 494
>UniRef50_Q3AVJ3 Cluster: Exoribonuclease II; n=3;
Synechococcus|Rep: Exoribonuclease II - Synechococcus
sp. (strain CC9902)
Length = 674
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H++L + Y TSPIRRYAD+ HR + A L
Sbjct: 534 HFSLGLAAYVQATSPIRRYADLASHRQIIAQL 565
>UniRef50_Q6CBW1 Cluster: Similar to sp|P39112| Saccharomyces
cerevisiae YMR287c; n=1; Yarrowia lipolytica|Rep:
Similar to sp|P39112| Saccharomyces cerevisiae YMR287c -
Yarrowia lipolytica (Candida lipolytica)
Length = 928
Score = 38.7 bits (86), Expect = 0.13
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
D H++L +P+Y TSP+RRY D++ H L A L
Sbjct: 778 DPKPHFSLAIPMYAQSTSPLRRYGDLLNHFQLHAHL 813
>UniRef50_Q9RYD0 Cluster: Ribonuclease II family protein; n=1;
Deinococcus radiodurans|Rep: Ribonuclease II family
protein - Deinococcus radiodurans
Length = 461
Score = 38.3 bits (85), Expect = 0.17
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRE 255
H+ + + LY TSP+RRY D++VH+ L A L R+
Sbjct: 327 HHGMGLDLYAQATSPMRRYLDLVVHQQLRAFLAGRD 362
>UniRef50_Q73MY5 Cluster: RNB-like family protein; n=1; Treponema
denticola|Rep: RNB-like family protein - Treponema
denticola
Length = 623
Score = 38.3 bits (85), Expect = 0.17
Identities = 14/37 (37%), Positives = 25/37 (67%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H AL + +Y+ TSP+RRY D++ H+ L ++ +E+
Sbjct: 487 HSALGIAMYSQITSPLRRYGDLVAHQQLLKFIDGKEV 523
>UniRef50_Q2FP21 Cluster: Ribonuclease II; n=1; Methanospirillum
hungatei JF-1|Rep: Ribonuclease II - Methanospirillum
hungatei (strain JF-1 / DSM 864)
Length = 492
Score = 38.3 bits (85), Expect = 0.17
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+AL V YTH T+P RRY D+++ RL+ + L
Sbjct: 348 HFALAVTDYTHGTAPNRRYVDLIIQRLIKSVL 379
>UniRef50_UPI00006A279F Cluster: Peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein (EC
3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-
interacting complex protein 285) (PPAR-gamma
DBD-interacting protein 1) (PDIP1).; n=2; Xenopus
tropicalis|Rep: Peroxisomal proliferator-activated
receptor A-interacting complex 285 kDa protein (EC
3.6.1.-) (ATP-dependent helicase PRIC285) (PPAR-alpha-
interacting complex protein 285) (PPAR-gamma
DBD-interacting protein 1) (PDIP1). - Xenopus tropicalis
Length = 1286
Score = 37.9 bits (84), Expect = 0.23
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
D HY+L + YT +SP+RRY DI+V RLL L
Sbjct: 716 DATGHYSLQLWAYTWASSPLRRYLDIVVQRLLQGIL 751
>UniRef50_A5GLA4 Cluster: Exoribonuclease R/ribonuclease II; n=2;
Synechococcus|Rep: Exoribonuclease R/ribonuclease II -
Synechococcus sp. (strain WH7803)
Length = 649
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H++L + Y TSPIRRY+D++V R AA L
Sbjct: 502 HFSLGLSAYAQATSPIRRYSDLVVQRQFAALL 533
>UniRef50_Q010V1 Cluster: Ribonuclease II; n=2; Ostreococcus|Rep:
Ribonuclease II - Ostreococcus tauri
Length = 758
Score = 37.9 bits (84), Expect = 0.23
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H L + Y FTSPIRRYAD++ H + A L
Sbjct: 616 HSGLGLDAYVQFTSPIRRYADLLAHYQIKAYL 647
>UniRef50_A3RLY2 Cluster: Chloroplast ribonuclease; n=1;
Chlamydomonas reinhardtii|Rep: Chloroplast ribonuclease
- Chlamydomonas reinhardtii
Length = 941
Score = 37.9 bits (84), Expect = 0.23
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA 285
+H AL + Y FTSPIRRY+D++ H L A L L + + A
Sbjct: 754 RHAALALDAYVQFTSPIRRYSDMLAHYNLKAWLRGEPLPFSGRQIEA 800
>UniRef50_A7BS43 Cluster: Exoribonuclease II; n=1; Beggiatoa sp.
PS|Rep: Exoribonuclease II - Beggiatoa sp. PS
Length = 261
Score = 37.5 bits (83), Expect = 0.30
Identities = 20/64 (31%), Positives = 34/64 (53%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA**LLNVTNRSTMLK 327
H L + +YT TSP+RR+AD+++ R L A L L + + + +L +R+
Sbjct: 122 HSGLGLSMYTQLTSPLRRFADLVMQRQLMAHLVSEHLPYDEEELLK--VLETADRTARES 179
Query: 328 RLVK 339
R V+
Sbjct: 180 RSVE 183
>UniRef50_A1SWZ6 Cluster: Exoribonuclease II; n=2; Psychromonas|Rep:
Exoribonuclease II - Psychromonas ingrahamii (strain 37)
Length = 656
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+ L V Y +TSPIR+Y D++ HRL+ + L
Sbjct: 487 HFTLGVDHYATWTSPIRKYGDLLNHRLIKSVL 518
>UniRef50_A0LG74 Cluster: Exoribonuclease II; n=1; Syntrophobacter
fumaroxidans MPOB|Rep: Exoribonuclease II -
Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB)
Length = 680
Score = 37.5 bits (83), Expect = 0.30
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = +1
Query: 106 KYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+ + A D QH +L + YT TSPIRRY D++V R + +L
Sbjct: 523 RLYARAELDTRSKQHCSLALEHYTTVTSPIRRYTDLVVQRQIKQAL 568
>UniRef50_Q6NQJ6 Cluster: At5g02250; n=3; core eudicotyledons|Rep:
At5g02250 - Arabidopsis thaliana (Mouse-ear cress)
Length = 803
Score = 37.5 bits (83), Expect = 0.30
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+H L +P Y FTSPIRRY D+ H + A L
Sbjct: 661 RHGVLGIPGYVQFTSPIRRYMDLTAHYQIKAFL 693
>UniRef50_Q2R1C7 Cluster: S1 self-incompatibility locus-linked
pollen G211 protein, putative; n=2; Oryza sativa
(japonica cultivar-group)|Rep: S1 self-incompatibility
locus-linked pollen G211 protein, putative - Oryza
sativa subsp. japonica (Rice)
Length = 258
Score = 37.5 bits (83), Expect = 0.30
Identities = 22/84 (26%), Positives = 43/84 (51%)
Frame = +3
Query: 225 AISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGA 404
A+S+ K + P+ +++ IA CN++K A E +LY I+ +V +
Sbjct: 141 ALSAAAKKFKLPS--SENLGEIAEHCNERKCAGHCAEEAGQKLYMWTLIKRKELLVADAI 198
Query: 405 VVDIREKYIDVIIVSMGLNRRIFF 476
V+ +R K++ V + + + RRI +
Sbjct: 199 VLGLRTKFMYVYVPKLTMERRIHY 222
>UniRef50_P59107 Cluster: Exoribonuclease 2; n=42;
Gammaproteobacteria|Rep: Exoribonuclease 2 - Shigella
flexneri
Length = 644
Score = 37.5 bits (83), Expect = 0.30
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
H+ L + Y +TSPIR+Y D++ HRLL A
Sbjct: 484 HFGLGLEAYATWTSPIRKYGDMINHRLLKA 513
>UniRef50_P44440 Cluster: Exoribonuclease 2; n=21;
Pasteurellaceae|Rep: Exoribonuclease 2 - Haemophilus
influenzae
Length = 659
Score = 37.5 bits (83), Expect = 0.30
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 106 KYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+Y A + H+ L + Y +TSPIR+Y+D++ HRL+ A L
Sbjct: 485 RYLTFAEFKSELAPHFGLGLEGYATWTSPIRKYSDMVNHRLIKAVL 530
>UniRef50_UPI0000F1E528 Cluster: PREDICTED: similar to KIAA1769
protein; n=1; Danio rerio|Rep: PREDICTED: similar to
KIAA1769 protein - Danio rerio
Length = 1054
Score = 37.1 bits (82), Expect = 0.40
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQ 261
HY L + YT +SP+RRY D++V RLL L+ + L+
Sbjct: 439 HYDLQMNAYTWASSPMRRYLDLIVQRLLHTMLSKQYLK 476
>UniRef50_O83783 Cluster: Exoribonuclease II; n=1; Treponema
pallidum|Rep: Exoribonuclease II - Treponema pallidum
Length = 759
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
H AL + Y+ TSP+RRY D++ H+ L A +++
Sbjct: 538 HAALGLSQYSQVTSPLRRYVDLLAHQQLLACIDH 571
>UniRef50_Q0RYH9 Cluster: Probable exoribonuclease II; n=1;
Rhodococcus sp. RHA1|Rep: Probable exoribonuclease II -
Rhodococcus sp. (strain RHA1)
Length = 615
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
H+ L + YTH TSP+RR +D++ R++ A L+
Sbjct: 262 HHGLRLAAYTHATSPLRRVSDLITQRVIFAHLD 294
>UniRef50_A6F5G1 Cluster: Exoribonuclease R; n=1; Marinobacter
algicola DG893|Rep: Exoribonuclease R - Marinobacter
algicola DG893
Length = 662
Score = 37.1 bits (82), Expect = 0.40
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H + + YT FTSP+R+++D VHRL+ + L
Sbjct: 492 HQGMGLAAYTTFTSPLRKFSDFHVHRLIKSIL 523
>UniRef50_Q2HG64 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 1027
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +1
Query: 154 ALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A+ + LYT TSP+RRY D++VH + A+L
Sbjct: 828 AMGLDLYTKVTSPLRRYPDLLVHWQIEAAL 857
>UniRef50_Q0W6Z1 Cluster: Ribonuclease II family protein,
C-terminal; n=3; cellular organisms|Rep: Ribonuclease II
family protein, C-terminal - Uncultured methanogenic
archaeon RC-I
Length = 213
Score = 36.7 bits (81), Expect = 0.53
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 133 DDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAAS 240
+D H+ L V Y H T+P RRY D++ RLL A+
Sbjct: 69 EDTAGHFGLAVKEYAHSTAPNRRYPDLITQRLLKAA 104
>UniRef50_P57354 Cluster: Exoribonuclease 2; n=6;
Gammaproteobacteria|Rep: Exoribonuclease 2 - Buchnera
aphidicola subsp. Acyrthosiphon pisum (Acyrthosiphon
pisumsymbiotic bacterium)
Length = 649
Score = 36.7 bits (81), Expect = 0.53
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLL 231
H+AL Y +TSPIR+Y+D++ HRLL
Sbjct: 485 HFALGFSEYATWTSPIRKYSDMINHRLL 512
>UniRef50_A0Z0P5 Cluster: Exoribonuclease R; n=3; Bacteria|Rep:
Exoribonuclease R - marine gamma proteobacterium
HTCC2080
Length = 688
Score = 36.3 bits (80), Expect = 0.70
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+H + + YT+FTSP+R+Y D + HR + L+
Sbjct: 519 EHMGMALNAYTNFTSPLRKYVDFLTHRQIKRVLS 552
>UniRef50_Q0V5W7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 1023
Score = 36.3 bits (80), Expect = 0.70
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNY 249
H + VP Y TSP+RR++D++ H + A+L Y
Sbjct: 846 HRIIGVPGYVRVTSPLRRFSDMIAHWQIEAALRY 879
>UniRef50_A6PKV3 Cluster: Ribonuclease II; n=1; Victivallis vadensis
ATCC BAA-548|Rep: Ribonuclease II - Victivallis vadensis
ATCC BAA-548
Length = 755
Score = 35.9 bits (79), Expect = 0.93
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
+H L++ Y TSP+RRYAD++ H+ L L EL
Sbjct: 618 KHPGLDLDPYGRVTSPLRRYADLLAHQQLRKHLKGEEL 655
>UniRef50_Q54IW8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 960
Score = 35.9 bits (79), Expect = 0.93
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGRKMMYA**LLNVTNRSTM-L 324
H++L + YT TSPIRRY DI+VH + + L + + + + ++ NR+ M +
Sbjct: 808 HHSLALDNYTWATSPIRRYPDIIVHSQIKSFLKNKNQVYSYQHLNK--IIPTVNRNLMAI 865
Query: 325 KRL 333
K+L
Sbjct: 866 KKL 868
>UniRef50_UPI000023E806 Cluster: hypothetical protein FG01251.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG01251.1 - Gibberella zeae PH-1
Length = 961
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/39 (38%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVH-RLLAASLNYRELQ 261
++ L + +YT TSP+RR++D++VH ++ AA + RE++
Sbjct: 770 YFMLGLDMYTKATSPLRRFSDLIVHWQIHAALAHEREMK 808
>UniRef50_Q31MZ3 Cluster: Putative ribonuclease II; n=3;
Synechococcus elongatus|Rep: Putative ribonuclease II -
Synechococcus sp. (strain PCC 7942) (Anacystis nidulans
R2)
Length = 465
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+AL +P Y +SP+RRY D++ R L A L
Sbjct: 251 HWALQLPAYARSSSPLRRYEDLVNQRQLLAIL 282
>UniRef50_Q01V71 Cluster: Exoribonuclease II; n=1; Solibacter
usitatus Ellin6076|Rep: Exoribonuclease II - Solibacter
usitatus (strain Ellin6076)
Length = 484
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/77 (29%), Positives = 35/77 (45%)
Frame = +1
Query: 7 PNSARAXYVGPDNTDKGRAMVLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFT 186
P + A V D ++L K M +Y A+ + H+ L YTH T
Sbjct: 297 PAALNAMLVARKKADPDHFADVSLTVLKLMGPGEYV-ASRPGTEATGHFGLAAHDYTHST 355
Query: 187 SPIRRYADIMVHRLLAA 237
+P RR+AD++ RL+ A
Sbjct: 356 APNRRFADLVTQRLVKA 372
>UniRef50_A7JFK7 Cluster: Ribonuclease II family protein; n=10;
Francisella tularensis|Rep: Ribonuclease II family
protein - Francisella tularensis subsp. novicida
GA99-3549
Length = 618
Score = 35.5 bits (78), Expect = 1.2
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H + + Y TSP+RRY D++VH L L ++E+
Sbjct: 478 HAGMGLEAYVQVTSPLRRYLDLIVHYQLRNFLQHKEM 514
>UniRef50_Q22Z15 Cluster: Zinc finger domain, LSD1 subclass family
protein; n=3; Tetrahymena thermophila SB210|Rep: Zinc
finger domain, LSD1 subclass family protein - Tetrahymena
thermophila SB210
Length = 1669
Score = 35.5 bits (78), Expect = 1.2
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = -3
Query: 341 HFTSLFSIVLLFVTLSSYHAYIIFLPCWSSL*FKLAAN 228
HF +F ++ LF ++ + HAY FLP SL FK N
Sbjct: 1574 HFKFIFLVIFLFASILTIHAYFWFLPQLESLKFKKDQN 1611
>UniRef50_Q46363 Cluster: Acetazolamide conferring resistance
protein zam; n=5; Chroococcales|Rep: Acetazolamide
conferring resistance protein zam - Synechocystis sp.
(strain PCC 6803)
Length = 782
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPL-YTHFTSPIRRYADIMVHRLL 231
VLN L A + KYF A H+AL YTH SP +RY D+++ RLL
Sbjct: 524 VLNHLLANTLKIEKYFSHPA------PHFALAYDSGYTHCVSPAQRYGDLVIQRLL 573
>UniRef50_P73177 Cluster: Uncharacterized ribonuclease sll1290;
n=12; Cyanobacteria|Rep: Uncharacterized ribonuclease
sll1290 - Synechocystis sp. (strain PCC 6803)
Length = 666
Score = 35.5 bits (78), Expect = 1.2
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+H +L + LY+ TSPIRRY D++ H + A L
Sbjct: 520 RHASLGLDLYSQATSPIRRYTDLITHFQMKAYL 552
>UniRef50_Q129F3 Cluster: Exoribonuclease II; n=6; cellular
organisms|Rep: Exoribonuclease II - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 492
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 118 AAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
A A H+ L V Y H T+P RR+ D++ RLL A+L
Sbjct: 344 AGAAGTTGLGHFGLAVNDYAHSTAPNRRFPDLVTQRLLKAAL 385
>UniRef50_A7I6H4 Cluster: Ribonuclease II; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribonuclease II -
Methanoregula boonei (strain 6A8)
Length = 497
Score = 35.1 bits (77), Expect = 1.6
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+AL V YTH T+P RRY DI+ R + A L
Sbjct: 353 HFALAVIDYTHATAPNRRYVDIINQRQIKAIL 384
>UniRef50_Q5MZZ6 Cluster: Protein conferring resistance to
acetazolamide Zam; n=2; Synechococcus elongatus|Rep:
Protein conferring resistance to acetazolamide Zam -
Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG
1402/1)(Anacystis nidulans)
Length = 748
Score = 34.7 bits (76), Expect = 2.1
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAA 237
H++L + Y HF +P +RYAD+ + R++ A
Sbjct: 540 HFSLGLETYGHFVAPSQRYADLWLQRVILA 569
>UniRef50_Q7VBX3 Cluster: Exoribonuclease R/ribonuclease II; n=1;
Prochlorococcus marinus|Rep: Exoribonuclease
R/ribonuclease II - Prochlorococcus marinus
Length = 432
Score = 34.3 bits (75), Expect = 2.8
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYAD-IMVHRLLAASLNYREL 258
+HY+L + Y+ TSP+RRY D I H+LL+ N ++L
Sbjct: 287 KHYSLALNKYSQATSPLRRYCDFINQHQLLSYFNNKKQL 325
>UniRef50_A3S2U2 Cluster: Exoribonuclease R/ribonuclease II; n=1;
Prochlorococcus marinus str. MIT 9211|Rep:
Exoribonuclease R/ribonuclease II - Prochlorococcus
marinus str. MIT 9211
Length = 427
Score = 34.3 bits (75), Expect = 2.8
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVH 222
H +L +P Y TSP+RRY D++ H
Sbjct: 286 HTSLGLPAYVQATSPLRRYIDLLTH 310
>UniRef50_A3PCZ0 Cluster: Probable ribonuclease II; n=5;
Prochlorococcus marinus|Rep: Probable ribonuclease II -
Prochlorococcus marinus (strain MIT 9301)
Length = 394
Score = 33.9 bits (74), Expect = 3.7
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYREL 258
H +L + +Y TSP+RRY D+++ R + +N E+
Sbjct: 256 HESLGLKMYVQCTSPLRRYLDLIIQRQVYNKINNYEV 292
>UniRef50_Q6WIX2 Cluster: S1 self-incompatibility locus-linked
pollen G211 protein; n=6; Magnoliophyta|Rep: S1
self-incompatibility locus-linked pollen G211 protein -
Petunia integrifolia subsp. inflata
Length = 259
Score = 33.5 bits (73), Expect = 4.9
Identities = 12/63 (19%), Positives = 36/63 (57%)
Frame = +3
Query: 288 IAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAVVDIREKYIDVIIVSMGLNRR 467
+AA CN++K ++ + + +LY ++ ++++ V+ + +++ + I + + RR
Sbjct: 70 VAAHCNERKLASRHVKDATEKLYMWVLLKKKKILLSDARVLALGPRFMTLYIHKLAIERR 129
Query: 468 IFF 476
I++
Sbjct: 130 IYY 132
>UniRef50_Q553P9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1328
Score = 33.5 bits (73), Expect = 4.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +1
Query: 136 DEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
+++QH+ P Y+ FT P++RY+DI R+L N
Sbjct: 842 EKYQHF----PYYSEFTEPLKRYSDIYNQRILNLRFN 874
>UniRef50_A6XH07 Cluster: Estrogen receptor variant; n=1; Homo
sapiens|Rep: Estrogen receptor variant - Homo sapiens
(Human)
Length = 100
Score = 33.1 bits (72), Expect = 6.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -2
Query: 615 YNGKKLXLTWXSFWQFIQPVSISVPFEPTSQVLRVY 508
+ K + W + W+F+Q + I +PF+P +L +Y
Sbjct: 27 WESKLVQPLWKAVWRFLQELKIELPFKPAIPLLGIY 62
>UniRef50_Q1DPE6 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 1044
Score = 33.1 bits (72), Expect = 6.5
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASLNYRELQHGR 270
H AL + Y TSP+RR++D++ H + A L RE + R
Sbjct: 854 HTALGMEQYAKCTSPLRRFSDLLCHWQIEAGLR-REAERKR 893
>UniRef50_Q2JIR4 Cluster: Exoribonuclease, VacB/RNB family; n=3;
Synechococcus|Rep: Exoribonuclease, VacB/RNB family -
Synechococcus sp. (strain JA-2-3B'a(2-13))
(Cyanobacteria bacteriumYellowstone B-Prime)
Length = 686
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 145 QHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
+H L + Y TSPIRRY D++ H + A L
Sbjct: 537 RHTGLGLDAYCQVTSPIRRYLDLVAHYQIKAFL 569
>UniRef50_A7EG05 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 782
Score = 32.7 bits (71), Expect = 8.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H A+ V + TSP+RRY D+++H + A+L
Sbjct: 615 HIAVGVEMMAKCTSPLRRYGDLLLHWQVQATL 646
>UniRef50_A4QVD5 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 1091
Score = 32.7 bits (71), Expect = 8.6
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 148 HYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
H+ L + Y TSP+RRY DI+ H + A+L
Sbjct: 877 HFWLGLKHYVKVTSPLRRYLDIVAHFQIHAAL 908
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,658,314
Number of Sequences: 1657284
Number of extensions: 12841726
Number of successful extensions: 27425
Number of sequences better than 10.0: 249
Number of HSP's better than 10.0 without gapping: 26551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27398
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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