Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0664.Seq
(688 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p pro... 82 6e-16
AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p pro... 82 6e-16
AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,... 82 6e-16
AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,... 82 6e-16
AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,... 82 6e-16
AY052150-1|AAK93574.1| 982|Drosophila melanogaster SD10981p pro... 77 3e-14
AJ276897-1|CAC35051.1| 983|Drosophila melanogaster putative exo... 77 3e-14
AE014297-3526|AAF56281.1| 982|Drosophila melanogaster CG6413-PA... 77 3e-14
AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.... 30 3.4
AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan pro... 30 3.4
AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB... 30 3.4
AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD... 30 3.4
AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA... 30 3.4
AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE... 30 3.4
AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC... 30 3.4
AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF... 30 3.4
AE014297-4023|AAF56640.2| 405|Drosophila melanogaster CG14252-P... 29 7.9
>BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p protein.
Length = 1044
Score = 82.2 bits (194), Expect = 6e-16
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L+ L KPM RA YFC+ + + HYAL++P+YTHFTSPIRRY DI+VHRLLAA+L
Sbjct: 851 LSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
Query: 247 Y 249
Y
Sbjct: 911 Y 911
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ LK P DD+ + N++KYNAKKAGE S LY +Y+ I V
Sbjct: 905 LAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVV 964
Query: 408 VDIREKYIDVIIVSMG 455
++I + ++V+ + G
Sbjct: 965 IEIFQHMMNVVTLESG 980
>AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p protein.
Length = 1032
Score = 82.2 bits (194), Expect = 6e-16
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L+ L KPM RA YFC+ + + HYAL++P+YTHFTSPIRRY DI+VHRLLAA+L
Sbjct: 839 LSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 898
Query: 247 Y 249
Y
Sbjct: 899 Y 899
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ LK P DD+ + N++KYNAKKAGE S LY +Y+ I V
Sbjct: 893 LAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVV 952
Query: 408 VDIREKYIDVIIVSMG 455
++I + ++V+ + G
Sbjct: 953 IEIFQHMMNVVTLESG 968
>AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,
isoform B protein.
Length = 1032
Score = 82.2 bits (194), Expect = 6e-16
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L+ L KPM RA YFC+ + + HYAL++P+YTHFTSPIRRY DI+VHRLLAA+L
Sbjct: 839 LSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 898
Query: 247 Y 249
Y
Sbjct: 899 Y 899
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ LK P DD+ + N++KYNAKKAGE S LY +Y+ I V
Sbjct: 893 LAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVV 952
Query: 408 VDIREKYIDVIIVSMG 455
++I + ++V+ + G
Sbjct: 953 IEIFQHMMNVVTLESG 968
>AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,
isoform A protein.
Length = 1032
Score = 82.2 bits (194), Expect = 6e-16
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L+ L KPM RA YFC+ + + HYAL++P+YTHFTSPIRRY DI+VHRLLAA+L
Sbjct: 839 LSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 898
Query: 247 Y 249
Y
Sbjct: 899 Y 899
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ LK P DD+ + N++KYNAKKAGE S LY +Y+ I V
Sbjct: 893 LAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVV 952
Query: 408 VDIREKYIDVIIVSMG 455
++I + ++V+ + G
Sbjct: 953 IEIFQHMMNVVTLESG 968
>AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,
isoform C protein.
Length = 1044
Score = 82.2 bits (194), Expect = 6e-16
Identities = 37/61 (60%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = +1
Query: 70 LNLLCAKPMTRAKYFCAAACDDD-EFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASLN 246
L+ L KPM RA YFC+ + + HYAL++P+YTHFTSPIRRY DI+VHRLLAA+L
Sbjct: 851 LSQLLMKPMARATYFCSEGKSEPADLWHYALSIPIYTHFTSPIRRYPDILVHRLLAAALK 910
Query: 247 Y 249
Y
Sbjct: 911 Y 911
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 228 ISSKLKL*RTPAWQEDDVRMIAAQCNKQKYNAKKAGEMSTELYTLKYIEXNSPIVTEGAV 407
+++ LK P DD+ + N++KYNAKKAGE S LY +Y+ I V
Sbjct: 905 LAAALKYCTPPKRTPDDLHTLTKLANERKYNAKKAGEDSGNLYFKRYVHNKQGIYMRAVV 964
Query: 408 VDIREKYIDVIIVSMG 455
++I + ++V+ + G
Sbjct: 965 IEIFQHMMNVVTLESG 980
>AY052150-1|AAK93574.1| 982|Drosophila melanogaster SD10981p
protein.
Length = 982
Score = 76.6 bits (180), Expect = 3e-14
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
++ +L + M +A YF + + +EF HY L P+YTHFTSPIRRY+DIMVHRLLAAS+
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
>AJ276897-1|CAC35051.1| 983|Drosophila melanogaster putative
exoribonuclease DIS3 protein.
Length = 983
Score = 76.6 bits (180), Expect = 3e-14
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
++ +L + M +A YF + + +EF HY L P+YTHFTSPIRRY+DIMVHRLLAAS+
Sbjct: 747 MIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 805
>AE014297-3526|AAF56281.1| 982|Drosophila melanogaster CG6413-PA
protein.
Length = 982
Score = 76.6 bits (180), Expect = 3e-14
Identities = 33/59 (55%), Positives = 44/59 (74%)
Frame = +1
Query: 67 VLNLLCAKPMTRAKYFCAAACDDDEFQHYALNVPLYTHFTSPIRRYADIMVHRLLAASL 243
++ +L + M +A YF + + +EF HY L P+YTHFTSPIRRY+DIMVHRLLAAS+
Sbjct: 746 MIRILTTRCMMQAVYFISGSLQKEEFFHYGLAAPIYTHFTSPIRRYSDIMVHRLLAASI 804
>AL138972-3|CAB72286.1| 2447|Drosophila melanogaster EG:BACR25B3.1
protein.
Length = 2447
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1430 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1482
>AJ487018-1|CAD31650.1| 4223|Drosophila melanogaster perlecan protein.
Length = 4223
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1421 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1473
>AE014298-409|AAN09080.1| 3215|Drosophila melanogaster CG33950-PB,
isoform B protein.
Length = 3215
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1315 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1367
>AE014298-408|AAN09079.1| 4223|Drosophila melanogaster CG33950-PD,
isoform D protein.
Length = 4223
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1421 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1473
>AE014298-407|AAF45786.3| 4179|Drosophila melanogaster CG33950-PA,
isoform A protein.
Length = 4179
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1315 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1367
>AE014298-406|AAN09078.1| 4228|Drosophila melanogaster CG33950-PE,
isoform E protein.
Length = 4228
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1315 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1367
>AE014298-405|AAN09077.1| 4117|Drosophila melanogaster CG33950-PC,
isoform C protein.
Length = 4117
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1315 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1367
>AE014298-404|AAF45787.2| 4629|Drosophila melanogaster CG33950-PF,
isoform F protein.
Length = 4629
Score = 29.9 bits (64), Expect = 3.4
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +1
Query: 31 VGPDNTDKGRAMVLNLLCAKPMTRAKYFC---AAACDDDEFQHYALNVPLYTH 180
V P TD A N+L K + FC A ACD YA++ P+ +H
Sbjct: 1827 VRPVRTDVCEAGFFNMLARKAEECVQCFCFGVAKACDSANLFTYAIHPPILSH 1879
>AE014297-4023|AAF56640.2| 405|Drosophila melanogaster CG14252-PA
protein.
Length = 405
Score = 28.7 bits (61), Expect = 7.9
Identities = 15/54 (27%), Positives = 28/54 (51%)
Frame = -3
Query: 512 SIHLYSPGKSLLKKYSPVQAHGNNDNINIFLPNVNHSTFSDYGRIXFNVL*SVQ 351
++HL+ PGK L + Y+ ++ + + + I + + S R FN+L S Q
Sbjct: 21 NLHLFEPGKKLTETYAELEPYFRDVGVEINVQGIK-SKMESLKRKYFNLLHSDQ 73
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,425,991
Number of Sequences: 53049
Number of extensions: 630332
Number of successful extensions: 1338
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1332
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -