Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0659.Seq
         (850 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    28   0.081
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    23   2.3  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    22   7.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.3  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.3  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 28.3 bits (60), Expect = 0.081
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +3

Query: 84  RNNFSIRYWSWNYRGCWHQTC 146
           R+NF   +  WNY  CW   C
Sbjct: 746 RHNFKGLHLDWNYPVCWQSNC 766



 Score = 23.4 bits (48), Expect = 2.3
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = +3

Query: 72   ELFNRNNFSIRYWSWNYRGCWHQTC 146
            +    NNF      W Y  CW   C
Sbjct: 1930 DFIETNNFDGLDLDWEYPKCWQVDC 1954


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -3

Query: 737 FFVPKXXPXLTLSRVYSFDL*GNFADF 657
           + VP+    L    V S+DL GN+A F
Sbjct: 197 YHVPELCELLDAIHVMSYDLRGNWAGF 223


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 5/16 (31%), Positives = 9/16 (56%)
 Frame = +3

Query: 93  FSIRYWSWNYRGCWHQ 140
           +++ YW   Y   WH+
Sbjct: 117 YAVYYWRQQYEDFWHR 132


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 289 TSKEGSRRANYPSRHGEVVTKNNDTGL 209
           T     + A+YPS   E+V + ND  +
Sbjct: 250 TPARNPKEADYPSPLYELVDRRNDENI 276


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 710 LTLSRVYSFDL*GNFADFG 654
           L L+ +YSFDL  N   FG
Sbjct: 138 LVLAFLYSFDLFANGITFG 156


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 723 FGNKEVHXLKNVG 761
           FGNK +   KN+G
Sbjct: 281 FGNKRIRYKKNIG 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,611
Number of Sequences: 336
Number of extensions: 4130
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)