Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0651.Seq
         (755 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7R3H9 Cluster: GLP_158_43204_45840; n=1; Giardia lambl...    36   1.1  
UniRef50_A4H8R2 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  

>UniRef50_Q7R3H9 Cluster: GLP_158_43204_45840; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_158_43204_45840 - Giardia lamblia
           ATCC 50803
          Length = 878

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 25/59 (42%), Positives = 32/59 (54%)
 Frame = -1

Query: 482 RLTQASASAFR*EHNRQAYWYFVNLLSVLSRPISEIKVALIIFSRSFCVNIICGEDMNS 306
           RLT  S S+F  EHN    +YFV LLS L R I+         + S CVNI   E+++S
Sbjct: 477 RLTNQSPSSFEREHNALLQYYFV-LLSTLGRFIA-------YTATSVCVNIFSSEEIDS 527


>UniRef50_A4H8R2 Cluster: Putative uncharacterized protein; n=1;
            Leishmania braziliensis|Rep: Putative uncharacterized
            protein - Leishmania braziliensis
          Length = 3349

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = -3

Query: 147  FCEQ-ININTTLSRLS*RSVEMFMFYWCSEDIRNPP-INCIPRDS 19
            F EQ + +   LSRLS   +E FM  W  +D+  PP +  +PR S
Sbjct: 1262 FMEQHLRVQERLSRLSDDELESFMLPWRKKDVSVPPAVQAVPRPS 1306


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,826,345
Number of Sequences: 1657284
Number of extensions: 12285729
Number of successful extensions: 21146
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21143
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)