Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0651.Seq
         (755 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   5.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   5.4  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.4  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -2

Query: 106 KLTVSGNVHVLLVFRGYSESAY 41
           K  +SG    +L + GYS SA+
Sbjct: 299 KTCISGRAFQVLTWLGYSNSAF 320


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -3

Query: 174 YNRKSIFSYFCEQININT 121
           YN ++  +YF E I +NT
Sbjct: 214 YNLENKLNYFIEDIGLNT 231


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 380 LISAEREHLKDLQNTNRLVDYVL 448
           +IS +  H+K + + N+L  YV+
Sbjct: 406 VISDDNIHIKGVISLNKLTSYVI 428


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,556
Number of Sequences: 438
Number of extensions: 4147
Number of successful extensions: 75
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)