Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0650.Seq
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   2.4  
AY341156-1|AAR13720.1|   98|Anopheles gambiae BolA protein.            25   4.2  
AY341155-1|AAR13719.1|   98|Anopheles gambiae BolA protein.            25   4.2  
AY341154-1|AAR13718.1|   98|Anopheles gambiae BolA protein.            25   4.2  
AY341153-1|AAR13717.1|   98|Anopheles gambiae BolA protein.            25   4.2  
AY341152-1|AAR13716.1|   98|Anopheles gambiae BolA protein.            25   4.2  
AY341151-1|AAR13715.1|   98|Anopheles gambiae BolA protein.            25   4.2  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   7.3  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +1

Query: 220 EINGKPDC-CRVYPLTCGVRKSLMIYLVRLENRNRHLPVSSSKST 351
           ++  KP   C++ P TCG +  L I++  L   ++ +      ST
Sbjct: 291 QVGNKPVFQCKLCPTTCGRKTDLRIHVQNLHTADKPIKCKRCDST 335


>AY341156-1|AAR13720.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 612 EKVPIMYSVMXAIEFHN*PKSSETRF 535
           E  P+   V+     HN PK SET F
Sbjct: 8   ELAPVHLEVVNESYMHNVPKGSETHF 33


>AY341155-1|AAR13719.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 612 EKVPIMYSVMXAIEFHN*PKSSETRF 535
           E  P+   V+     HN PK SET F
Sbjct: 8   ELAPVHLEVVNESYMHNVPKGSETHF 33


>AY341154-1|AAR13718.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 612 EKVPIMYSVMXAIEFHN*PKSSETRF 535
           E  P+   V+     HN PK SET F
Sbjct: 8   ELAPVHLEVVNESYMHNVPKGSETHF 33


>AY341153-1|AAR13717.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 612 EKVPIMYSVMXAIEFHN*PKSSETRF 535
           E  P+   V+     HN PK SET F
Sbjct: 8   ELAPVHLEVVNESYMHNVPKGSETHF 33


>AY341152-1|AAR13716.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 612 EKVPIMYSVMXAIEFHN*PKSSETRF 535
           E  P+   V+     HN PK SET F
Sbjct: 8   ELAPVHLEVVNESYMHNVPKGSETHF 33


>AY341151-1|AAR13715.1|   98|Anopheles gambiae BolA protein.
          Length = 98

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 612 EKVPIMYSVMXAIEFHN*PKSSETRF 535
           E  P+   V+     HN PK SET F
Sbjct: 8   ELAPVHLEVVNESYMHNVPKGSETHF 33


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 781 PGSXWXMGFXLLPKIPFKKGTPGQXGRWSPK 873
           PG+    G    P +P + GTPG  G   PK
Sbjct: 603 PGASGVPGERGYPGMPGEDGTPGLRGEPGPK 633


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -3

Query: 631  SXEFXLGKGTDNVFGDEXHR 572
            S E  +G GTDN  G+E  R
Sbjct: 1290 SNEMAVGVGTDNDMGEEGRR 1309


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 875,354
Number of Sequences: 2352
Number of extensions: 17448
Number of successful extensions: 82
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)