Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0649.Seq
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL603750-1|CAH72669.1| 1116|Homo sapiens synapse defective 1, Rh... 31 3.1
Z83067-1|CAB05445.1| 1455|Homo sapiens FAA protein. 30 7.1
X99226-1|CAA67610.1| 1455|Homo sapiens Fanconi anemia complement... 30 7.1
AY598423-1|AAS99350.1| 1429|Homo sapiens Fanconi anemia, complem... 30 7.1
AC005360-1|AAC28751.1| 846|Homo sapiens FAA protein. 30 7.1
BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein. 30 9.4
BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein. 30 9.4
BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein. 30 9.4
BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein. 30 9.4
BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein. 30 9.4
BC032109-1|AAH32109.1| 859|Homo sapiens low density lipoprotein... 30 9.4
AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protei... 30 9.4
AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protei... 30 9.4
AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protei... 30 9.4
AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protei... 30 9.4
AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic ... 30 9.4
AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic ... 30 9.4
AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic ... 30 9.4
AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic ... 30 9.4
AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic ... 30 9.4
AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic ... 30 9.4
AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitin... 30 9.4
AF166350-1|AAD44360.1| 859|Homo sapiens ST7 protein protein. 30 9.4
AB208957-1|BAD92194.1| 793|Homo sapiens suppression of tumorige... 30 9.4
AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitina... 30 9.4
AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitina... 30 9.4
>AL603750-1|CAH72669.1| 1116|Homo sapiens synapse defective 1, Rho
GTPase, homolog 2 (C. elegans) protein.
Length = 1116
Score = 31.5 bits (68), Expect = 3.1
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +2
Query: 113 LRFLPSPHLL*QILEV---RQRCSELKTCGNGLAFDATDSKYLTENCDYLPTL 262
LR LPSP + Q+ E S LK NG D DSKY + D LP +
Sbjct: 819 LRELPSPLITKQLYEAVLDAMAKSPLKMSSNGCENDPGDSKYTVDLLDCLPEI 871
>Z83067-1|CAB05445.1| 1455|Homo sapiens FAA protein.
Length = 1455
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 241 LRLPSNVECGERTQLEPPISTPHCSRLYGIFPDE 342
LRLPS+V CG Q E PI T C + + + E
Sbjct: 1083 LRLPSSVLCGSSFQAEQPI-TARCEQFFHLVNSE 1115
>X99226-1|CAA67610.1| 1455|Homo sapiens Fanconi anemia complementation
group A protein protein.
Length = 1455
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 241 LRLPSNVECGERTQLEPPISTPHCSRLYGIFPDE 342
LRLPS+V CG Q E PI T C + + + E
Sbjct: 1083 LRLPSSVLCGSSFQAEQPI-TARCEQFFHLVNSE 1115
>AY598423-1|AAS99350.1| 1429|Homo sapiens Fanconi anemia,
complementation group A protein.
Length = 1429
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 241 LRLPSNVECGERTQLEPPISTPHCSRLYGIFPDE 342
LRLPS+V CG Q E PI T C + + + E
Sbjct: 1057 LRLPSSVLCGSSFQAEQPI-TARCEQFFHLVNSE 1089
>AC005360-1|AAC28751.1| 846|Homo sapiens FAA protein.
Length = 846
Score = 30.3 bits (65), Expect = 7.1
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +1
Query: 241 LRLPSNVECGERTQLEPPISTPHCSRLYGIFPDE 342
LRLPS+V CG Q E PI T C + + + E
Sbjct: 474 LRLPSSVLCGSSFQAEQPI-TARCEQFFHLVNSE 506
>BC139920-1|AAI39921.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 364 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 407
>BC139901-1|AAI39902.1| 407|Homo sapiens CHIA protein protein.
Length = 407
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 364 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 407
>BC106910-1|AAI06911.1| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 325 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 368
>BC047336-1|AAH47336.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 325 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 368
>BC036339-1|AAH36339.2| 368|Homo sapiens chitinase, acidic protein.
Length = 368
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 325 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 368
>BC032109-1|AAH32109.1| 859|Homo sapiens low density
lipoprotein-related protein 12 protein.
Length = 859
Score = 29.9 bits (64), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 102 CPDDFGFYPHHISCDKYWKCDNG 170
C ++G Y CD YW C NG
Sbjct: 382 CGGNWGCYTEQQRCDGYWHCPNG 404
>AY911310-1|AAX81433.1| 315|Homo sapiens chitinase family protein
V1 protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 272 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 315
>AY825504-1|AAX54833.1| 430|Homo sapiens chitinase family protein 3
protein.
Length = 430
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 387 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 430
>AY789445-1|AAX81432.1| 315|Homo sapiens chitinase family protein 2
protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 272 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 315
>AY789444-1|AAX81431.1| 368|Homo sapiens chitinase family protein 1
protein.
Length = 368
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 325 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 368
>AL513202-5|CAH70804.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 362 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 405
>AL513202-4|CAH70803.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 433 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 476
>AL513202-3|CAH70802.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 377 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 420
>AL356387-9|CAI19266.1| 405|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 362 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 405
>AL356387-8|CAI19265.1| 476|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 476
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 433 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 476
>AL356387-6|CAI19263.1| 420|Homo sapiens eosinophil chemotactic
cytokine (CHIA) protein.
Length = 420
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 377 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 420
>AF290004-1|AAG60019.1| 476|Homo sapiens acidic mammalian chitinase
precursor protein.
Length = 476
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 433 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 476
>AF166350-1|AAD44360.1| 859|Homo sapiens ST7 protein protein.
Length = 859
Score = 29.9 bits (64), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 102 CPDDFGFYPHHISCDKYWKCDNG 170
C ++G Y CD YW C NG
Sbjct: 382 CGGNWGCYTEQQRCDGYWHCPNG 404
>AB208957-1|BAD92194.1| 793|Homo sapiens suppression of
tumorigenicity variant protein.
Length = 793
Score = 29.9 bits (64), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 102 CPDDFGFYPHHISCDKYWKCDNG 170
C ++G Y CD YW C NG
Sbjct: 316 CGGNWGCYTEQQRCDGYWHCPNG 338
>AB025009-1|BAA86981.1| 315|Homo sapiens novel member of chitinase
family protein.
Length = 315
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 272 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 315
>AB025008-1|BAA86980.1| 368|Homo sapiens novel member of chitinase
family protein.
Length = 368
Score = 29.9 bits (64), Expect = 9.4
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 316 RLYGIFPDENKCDVFWNCWNGEASRLSVQPRTLLTTEKSRVCMWA 450
R G++P N + FW+C NG + + Q + T C WA
Sbjct: 325 RANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDT-SCDCCNWA 368
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,611,466
Number of Sequences: 237096
Number of extensions: 2183460
Number of successful extensions: 5592
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5592
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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