Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0647.Seq
         (919 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    40   0.12 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    37   0.63 
UniRef50_Q4XR86 Cluster: Putative uncharacterized protein; n=1; ...    36   1.9  
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    35   3.3  
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    35   3.3  
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    35   3.3  
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    34   4.4  
UniRef50_Q55AK1 Cluster: Putative uncharacterized protein; n=2; ...    33   7.7  
UniRef50_Q556T7 Cluster: Putative uncharacterized protein; n=2; ...    33   7.7  
UniRef50_A2D7J7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  

>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 22/35 (62%), Positives = 23/35 (65%)
 Frame = +1

Query: 634 SESYYIHWAVVLQRRDWEXPGGXPNLNRPCSXXPF 738
           SESYY   AVVLQRRDWE P G   LNR  +  PF
Sbjct: 62  SESYY-GLAVVLQRRDWENP-GVTQLNRLAAHPPF 94


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 37.1 bits (82), Expect = 0.63
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +2

Query: 602 RGGARYPIRPIVSRIT 649
           RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275


>UniRef50_Q4XR86 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 78

 Score = 35.5 bits (78), Expect = 1.9
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = -2

Query: 606 PRVFFFFFYITYLNIIFIKKYNLTIYIY 523
           P +FFFFFYI Y+ I+ +++ +  IY Y
Sbjct: 31  PSLFFFFFYILYIFILIMRRIHTHIYYY 58


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = +1

Query: 658 AVVLQRRDWEXPGGXPNLNRPCSXXPF 738
           AVVLQRRDWE P G   LNR  +  PF
Sbjct: 23  AVVLQRRDWENP-GVTQLNRLAAHPPF 48


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = +1

Query: 658 AVVLQRRDWEXPGGXPNLNRPCSXXPF 738
           AVVLQRRDWE P G   LNR  +  PF
Sbjct: 27  AVVLQRRDWENP-GVTQLNRLAAHPPF 52


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 34.7 bits (76), Expect = 3.3
 Identities = 17/27 (62%), Positives = 18/27 (66%)
 Frame = +1

Query: 658 AVVLQRRDWEXPGGXPNLNRPCSXXPF 738
           AVVLQRRDWE P G   LNR  +  PF
Sbjct: 9   AVVLQRRDWENP-GVTQLNRLAAHPPF 34


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 34.3 bits (75), Expect = 4.4
 Identities = 21/34 (61%), Positives = 22/34 (64%)
 Frame = +2

Query: 659 PSFYNVVTGKXLAVXPT*IALAAXXPFGXLGVIS 760
           PSFYNVVTGK LA+ P  IAL    P    GVIS
Sbjct: 7   PSFYNVVTGKTLAL-PNLIAL-QHIPLSPAGVIS 38


>UniRef50_Q55AK1 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 354

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = -2

Query: 378 ITLHLQFYYQLIIHTKNRTCRRKVFFYHY-KYITAYI-IINRTFQIQPVH*P--CNTSDD 211
           + L L  YY  ++  K R    ++F Y Y K    YI  IN T   +    P  CN ++D
Sbjct: 18  VLLKLIIYYYQLLSFKTRYIISQIFMYLYIKTPNDYIDYINTTIDDRISSPPLNCNNNND 77

Query: 210 TTNNKYNTIKNRQNTNESRVT 148
             NN  N  + +Q   +S  T
Sbjct: 78  NNNNNNNNKQQQQQQQQSTNT 98


>UniRef50_Q556T7 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 2048

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 19/67 (28%), Positives = 33/67 (49%)
 Frame = -1

Query: 481 VETGIINLSLPTQMTNQRGAFTSAGPHSFTHKYIYNIAPSILLSVNYTHKKSYMPSKSLF 302
           V+  I +L L + + +  G F    P    ++    + PS+L S   +H   +  S +LF
Sbjct: 438 VKVRIFSLELISNIFDDYGRFIKHYPSFINYEIREGLFPSVLNSGFSSHSTIFRLSLTLF 497

Query: 301 LSLQIHY 281
           LS+ +HY
Sbjct: 498 LSMVVHY 504


>UniRef50_A2D7J7 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 944

 Score = 33.5 bits (73), Expect = 7.7
 Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
 Frame = -2

Query: 393 LINTFITLHLQFYYQLII----HTKNRTCRRKVFFYHYKYITAYIIINRTFQIQPVH*PC 226
           ++N  I L  +FYY+LI+    +TKN +  +K F  H+K   A IIIN   QI  +  P 
Sbjct: 230 IVNMKIALS-KFYYKLIVEFSTNTKNASDIKKSFAEHFKQELAPIIINTIKQICVIPQPF 288

Query: 225 NTS 217
           + S
Sbjct: 289 SVS 291


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 778,645,505
Number of Sequences: 1657284
Number of extensions: 14402172
Number of successful extensions: 84078
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 36149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 78391
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)