Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0643.Seq
         (726 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   3.3  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    21   7.7  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    21   7.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   7.7  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   7.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = +2

Query: 326 RLVFDRGVVETPCFMPVGTYGTVKG----MTPEEVEATGAQIILGNTFHLWLRPGQEIMK 493
           ++V    +VE+PC + +  YG        M  + +  T     +    HL + P   I+K
Sbjct: 574 KVVVSNRLVESPCCITMRRYGWTANMERIMKAQALRDTSTMGYMAAKKHLEINPDPSILK 633


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 598 RTGAXHFRXPDSNGD 642
           R G   FR PD NG+
Sbjct: 360 RKGTYAFRTPDENGE 374


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 47   TSASTTLYWKPG 12
            TS STT  W PG
Sbjct: 1350 TSVSTTTSWNPG 1361


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 529 FHCIKSCESPVQFHDFLARAQ 467
           F C  SC +PV +  F  RA+
Sbjct: 319 FACTNSCMNPVVYGVFNIRAR 339


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -3

Query: 529 FHCIKSCESPVQFHDFLARAQ 467
           F C  SC +PV +  F  RA+
Sbjct: 319 FACTNSCMNPVVYGVFNIRAR 339


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 112 VDNRQRPKP 86
           VDNR++PKP
Sbjct: 492 VDNRRKPKP 500


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 439 YPRQHLPPVAAPGPGN 486
           YP+    P AAP PG+
Sbjct: 5   YPQYPQHPYAAPAPGH 20


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,774
Number of Sequences: 336
Number of extensions: 3428
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)