Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0643.Seq
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    26   1.4  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   7.3  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   7.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   7.3  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -3

Query: 412 FRRHPFYGAVGANRHKTRRFHYATIKDQAA 323
           F + PF  AV + +HK +RF  +   D++A
Sbjct: 328 FHQSPFMQAVESQKHKQQRFARSLDDDESA 357


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +2

Query: 365 FMPVGTYGTVKG-MTPEEVEATGAQIILGNTFH 460
           ++P   +G     M P  V++ GAQI +G   H
Sbjct: 5   WIPTSVHGPYPPHMVPGGVDSDGAQIFVGRAHH 37


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 598 RTGAXHFRXPDSNGD 642
           R G+  FR PDSNG+
Sbjct: 368 RFGSYAFRLPDSNGE 382


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 442 PRQHLPPVAAPG 477
           P  HLPP A+PG
Sbjct: 110 PNHHLPPGASPG 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 741,610
Number of Sequences: 2352
Number of extensions: 15035
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)