Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0643.Seq
         (726 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF302783-1|AAG60033.1|  403|Homo sapiens tRNA-guanine transglyco...    79   2e-14
AF302784-1|AAG60034.1|  379|Homo sapiens tRNA-guanine transglyco...    77   6e-14
BC015350-1|AAH15350.1|  358|Homo sapiens QTRT1 protein protein.        59   2e-08
BC092414-1|AAH92414.1|  530|Homo sapiens major facilitator super...    31   5.6  
BC011587-1|AAH11587.1|  530|Homo sapiens major facilitator super...    31   5.6  
AL663070-3|CAI20269.1|  543|Homo sapiens major facilitator super...    31   5.6  
AL663070-2|CAI20268.1|  530|Homo sapiens major facilitator super...    31   5.6  
AL663070-1|CAI20267.1|  266|Homo sapiens major facilitator super...    31   5.6  
AK093223-1|BAC04100.1|  543|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AK075183-1|BAC11456.1|  530|Homo sapiens protein ( Homo sapiens ...    31   5.6  
AB073383-1|BAD38634.1|  530|Homo sapiens putative protein produc...    31   5.6  

>AF302783-1|AAG60033.1|  403|Homo sapiens tRNA-guanine
           transglycosylase protein.
          Length = 403

 Score = 78.6 bits (185), Expect = 2e-14
 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
 Frame = +2

Query: 281 MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFH 460
           M+   + +  RAR G L    G V TP FMPVGT  T+KG+T E+++A G +I LGNT+H
Sbjct: 17  MRLVAECSRSRARAGELWLPHGTVATPVFMPVGTQATMKGITTEQLDALGCRICLGNTYH 76

Query: 461 LWLRPGQEIMK----LHG 502
           L LRPG E+++    LHG
Sbjct: 77  LGLRPGPELIQKANGLHG 94


>AF302784-1|AAG60034.1|  379|Homo sapiens tRNA-guanine
           transglycosylase protein.
          Length = 379

 Score = 77.0 bits (181), Expect = 6e-14
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
 Frame = +2

Query: 311 RARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIM 490
           RAR G L    G V TP FMPVGT  T+KG+T E+++A G +I LGNT+HL LRPG E++
Sbjct: 3   RARAGELWLPHGTVATPVFMPVGTQATMKGITTEQLDALGCRICLGNTYHLGLRPGPELI 62

Query: 491 K----LHG 502
           +    LHG
Sbjct: 63  QKANGLHG 70


>BC015350-1|AAH15350.1|  358|Homo sapiens QTRT1 protein protein.
          Length = 358

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 27/49 (55%), Positives = 37/49 (75%), Gaps = 4/49 (8%)
 Frame = +2

Query: 368 MPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIMK----LHG 502
           MPVGT  T+KG+T E+++A G +I LGNT+HL LRPG E+++    LHG
Sbjct: 1   MPVGTQATMKGITTEQLDALGCRICLGNTYHLGLRPGPELIQKANGLHG 49


>BC092414-1|AAH92414.1|  530|Homo sapiens major facilitator
           superfamily domain containing 2 protein.
          Length = 530

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 151 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 190


>BC011587-1|AAH11587.1|  530|Homo sapiens major facilitator
           superfamily domain containing 2 protein.
          Length = 530

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 151 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 190


>AL663070-3|CAI20269.1|  543|Homo sapiens major facilitator
           superfamily domain containing 2 protein.
          Length = 543

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 164 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 203


>AL663070-2|CAI20268.1|  530|Homo sapiens major facilitator
           superfamily domain containing 2 protein.
          Length = 530

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 151 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 190


>AL663070-1|CAI20267.1|  266|Homo sapiens major facilitator
           superfamily domain containing 2 protein.
          Length = 266

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 149 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 188


>AK093223-1|BAC04100.1|  543|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35904 fis, clone TESTI2009588. ).
          Length = 543

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 164 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 203


>AK075183-1|BAC11456.1|  530|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90702 fis, clone PLACE1007096, weakly similar to
           PUTATIVE SUGAR TRANSPORT PROTEIN GUTA. ).
          Length = 530

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 151 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 190


>AB073383-1|BAD38634.1|  530|Homo sapiens putative protein product
           of HMFN0656 protein.
          Length = 530

 Score = 30.7 bits (66), Expect = 5.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 25  YKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVE 144
           Y + + +VT FH+P S L M +S     + +  AY+  VE
Sbjct: 151 YCLFETMVTCFHVPYSALTMFISTEQTERDSATAYRMTVE 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,777,507
Number of Sequences: 237096
Number of extensions: 2257646
Number of successful extensions: 3786
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3786
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)