Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0643.Seq
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052033-1|AAK93457.1|  427|Drosophila melanogaster LP01967p pro...    73   4e-13
AE014134-228|AAF51396.1|  427|Drosophila melanogaster CG4947-PA ...    73   4e-13
BT011550-1|AAS15686.1|  186|Drosophila melanogaster GH27387p pro...    30   3.7  
AY051675-1|AAK93099.1| 1612|Drosophila melanogaster LD22664p pro...    30   3.7  
AJ242529-1|CAB43711.1| 1613|Drosophila melanogaster pacman prote...    30   3.7  
AE014298-2845|AAF48958.1| 1612|Drosophila melanogaster CG3291-PA...    30   3.7  
AE014297-3712|AAF56394.1|  328|Drosophila melanogaster CG9996-PA...    30   3.7  

>AY052033-1|AAK93457.1|  427|Drosophila melanogaster LP01967p
           protein.
          Length = 427

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 33/69 (47%), Positives = 44/69 (63%)
 Frame = +2

Query: 311 RARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIM 490
           +AR G +      V TP FMPVGT GT+KG+ P+++     QI+LGNT+HL LRPG E +
Sbjct: 21  KARAGLMTLRHSEVNTPVFMPVGTQGTLKGIVPDQLIELNCQILLGNTYHLGLRPGIETL 80

Query: 491 KLHGRFARF 517
           K  G   +F
Sbjct: 81  KKAGGLHKF 89


>AE014134-228|AAF51396.1|  427|Drosophila melanogaster CG4947-PA
           protein.
          Length = 427

 Score = 72.9 bits (171), Expect = 4e-13
 Identities = 33/69 (47%), Positives = 44/69 (63%)
 Frame = +2

Query: 311 RARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPEEVEATGAQIILGNTFHLWLRPGQEIM 490
           +AR G +      V TP FMPVGT GT+KG+ P+++     QI+LGNT+HL LRPG E +
Sbjct: 21  KARAGLMTLRHSEVNTPVFMPVGTQGTLKGIVPDQLIELNCQILLGNTYHLGLRPGIETL 80

Query: 491 KLHGRFARF 517
           K  G   +F
Sbjct: 81  KKAGGLHKF 89


>BT011550-1|AAS15686.1|  186|Drosophila melanogaster GH27387p
           protein.
          Length = 186

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 442 DNLRASGFNFFRRHPFYGAVGAN 374
           +N     +N F RHPFYG +G N
Sbjct: 9   ENENIGWYNRFARHPFYGRLGVN 31


>AY051675-1|AAK93099.1| 1612|Drosophila melanogaster LD22664p protein.
          Length = 1612

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 311  RARRGRLVFDRGVVETPCFM-PVGTYGTVKGMTP 409
            R++R   +FDR V+    +M PVGT GTV G+ P
Sbjct: 1054 RSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHP 1087


>AJ242529-1|CAB43711.1| 1613|Drosophila melanogaster pacman protein
            protein.
          Length = 1613

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 311  RARRGRLVFDRGVVETPCFM-PVGTYGTVKGMTP 409
            R++R   +FDR V+    +M PVGT GTV G+ P
Sbjct: 1054 RSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHP 1087


>AE014298-2845|AAF48958.1| 1612|Drosophila melanogaster CG3291-PA
            protein.
          Length = 1612

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
 Frame = +2

Query: 311  RARRGRLVFDRGVVETPCFM-PVGTYGTVKGMTP 409
            R++R   +FDR V+    +M PVGT GTV G+ P
Sbjct: 1054 RSKRPVRLFDRVVIVRTIYMVPVGTKGTVIGIHP 1087


>AE014297-3712|AAF56394.1|  328|Drosophila melanogaster CG9996-PA
           protein.
          Length = 328

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 442 DNLRASGFNFFRRHPFYGAVGAN 374
           +N     +N F RHPFYG +G N
Sbjct: 151 ENENIGWYNRFARHPFYGRLGVN 173


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,130,270
Number of Sequences: 53049
Number of extensions: 659700
Number of successful extensions: 1540
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)